FFCP PHASE1:Hg19::chr11:118016128..118016153,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:118016128..118016153,- to FFCP PHASE1:Hg19::chr11:118016128..118016153,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6330 | |EntrezGene=6330 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10592 | |HGNC=10592 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000415030_5end | |||
|cluster_id=chr11:118016128..118016153,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_SCN4B_5end | |||
|id=chr11:118016128..118016153,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.62e-19;3!UBERON:0006601;3.52e-14;82!UBERON:0006222;7.95e-07;1!UBERON:0010227;9.72e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.85e-77!115;UBERON:0001049!7.21e-70!57;UBERON:0005068!7.21e-70!57;UBERON:0006241!7.21e-70!57;UBERON:0007135!7.21e-70!57;UBERON:0001017!7.32e-62!82;UBERON:0005743!4.52e-61!86;UBERON:0002616!1.03e-60!59;UBERON:0000073!2.78e-56!94;UBERON:0001016!2.78e-56!94;UBERON:0000955!2.94e-55!69;UBERON:0006238!2.94e-55!69;UBERON:0002780!1.27e-53!41;UBERON:0001890!1.27e-53!41;UBERON:0006240!1.27e-53!41;UBERON:0003080!3.86e-52!42;UBERON:0003075!1.32e-51!86;UBERON:0007284!1.32e-51!86;UBERON:0001893!4.66e-50!34;UBERON:0002020!9.16e-50!34;UBERON:0003528!9.16e-50!34;UBERON:0002346!9.95e-49!90;UBERON:0002791!9.88e-48!33;UBERON:0001869!4.71e-46!32;UBERON:0002619!3.42e-45!22;UBERON:0001950!1.13e-40!20;UBERON:0000956!3.26e-39!25;UBERON:0000203!3.26e-39!25;UBERON:0003056!1.74e-35!61;UBERON:0000033!1.56e-33!123;UBERON:0000153!6.41e-33!129;UBERON:0007811!6.41e-33!129;UBERON:0004121!1.94e-30!169;UBERON:0000924!2.12e-29!173;UBERON:0006601!2.12e-29!173;UBERON:0000025!1.75e-18!194;UBERON:0003076!5.23e-18!15;UBERON:0003057!5.23e-18!15;UBERON:0004111!4.23e-17!241;UBERON:0004733!8.72e-16!12;UBERON:0002028!8.72e-16!12;UBERON:0007277!8.72e-16!12;UBERON:0000200!1.25e-15!6;UBERON:0001871!3.36e-15!7;UBERON:0000477!1.86e-14!286;UBERON:0004732!2.05e-14!13;UBERON:0002298!3.95e-14!8;UBERON:0001872!3.56e-13!5;UBERON:0000349!4.55e-13!5;UBERON:0002420!2.79e-12!9;UBERON:0007245!2.79e-12!9;UBERON:0010009!2.79e-12!9;UBERON:0010011!2.79e-12!9;UBERON:0000454!2.79e-12!9;UBERON:0002308!6.94e-12!9;UBERON:0000125!6.94e-12!9;UBERON:0000064!2.19e-11!219;UBERON:0000483!5.23e-11!309;UBERON:0000119!9.07e-11!312;UBERON:0002680!6.32e-10!9;UBERON:0001895!6.32e-10!9;UBERON:0010092!6.32e-10!9;UBERON:0000481!8.38e-10!347;UBERON:0000475!2.29e-09!365;UBERON:0000062!2.97e-09!511;UBERON:0002021!1.03e-08!5;UBERON:0002771!1.52e-08!3;UBERON:0001896!4.34e-08!3;UBERON:0005290!4.34e-08!3;UBERON:0010096!4.34e-08!3;UBERON:0009663!4.37e-08!7;UBERON:0000988!4.89e-08!3;UBERON:0006331!1.09e-07!3;UBERON:0000922!1.40e-07!612;UBERON:0000923!2.13e-07!604;UBERON:0005291!2.13e-07!604;UBERON:0006598!2.13e-07!604;UBERON:0002532!2.13e-07!604;UBERON:0002050!2.36e-07!605;UBERON:0005423!2.36e-07!605;UBERON:0000467!4.76e-07!625;UBERON:0000480!5.24e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.07e-87;22!UBERON:0001950;1.27e-76;20!UBERON:0000956;1.61e-76;25!UBERON:0000203;1.61e-76;25!UBERON:0001869;1.69e-64;32!UBERON:0003528;5.05e-60;34!UBERON:0002020;5.05e-60;34!UBERON:0002791;1.82e-57;32!UBERON:0001893;3.92e-57;34!UBERON:0000073;2.93e-47;53!UBERON:0002616;2.93e-47;53!UBERON:0002780;2.62e-42;41!UBERON:0001890;2.62e-42;41!UBERON:0000200;2.04e-34;6!UBERON:0000955;4.66e-30;68!UBERON:0000349;2.14e-28;5!UBERON:0001017;1.85e-25;75!UBERON:0004733;1.53e-22;12!UBERON:0002028;1.53e-22;12!UBERON:0001016;6.46e-21;83!UBERON:0004732;9.57e-21;13!UBERON:0001871;1.43e-20;6!UBERON:0001872;3.59e-19;5!UBERON:0002021;9.06e-19;5!UBERON:0001870;2.36e-18;3!UBERON:0002680;4.37e-16;9!UBERON:0001895;4.37e-16;9!UBERON:0002298;7.96e-15;6!UBERON:0007023;7.12e-14;114!UBERON:0002702;1.04e-12;2!UBERON:0001876;1.11e-12;2!UBERON:0002771;3.23e-12;2!UBERON:0001954;3.23e-12;2!UBERON:0003022;3.23e-12;2!UBERON:0002421;3.23e-12;2!UBERON:0002600;3.23e-12;2!UBERON:0002037;1.07e-09;6!UBERON:0011216;2.94e-09;132!UBERON:0000988;2.85e-08;3!UBERON:0001896;3.13e-08;3!UBERON:0005290;3.13e-08;3!UBERON:0002902;1.65e-07;1!UBERON:0009899;1.65e-07;1!UBERON:0002022;1.86e-07;1!UBERON:0002581;2.30e-07;1!UBERON:0007190;2.30e-07;1!UBERON:0001882;5.45e-07;1!UBERON:0003112;5.45e-07;1!UBERON:0011158;5.45e-07;1!UBERON:0003128;5.45e-07;1!UBERON:0005403;5.45e-07;1!UBERON:0001703;5.45e-07;1!UBERON:0002241;5.45e-07;1!UBERON:0002079;9.72e-07;1 | |||
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|short_description=p3@SCN4B | |||
}} | }} |
Latest revision as of 23:08, 15 September 2015
Short description: | p3@SCN4B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SCN4B_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000415030_5end |
EntrezGene: | SCN4B |
HGNC: | 10592 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data