FFCP PHASE1:Hg19::chr11:130029635..130029654,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:130029635..130029654,+ to FFCP PHASE1:Hg19::chr11:130029635..130029654,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6768 | |EntrezGene=6768 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11344 | |HGNC=11344 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5Y6 | |UniProt=Q9Y5Y6 | ||
|association_with_transcript=-27bp_to_NM_021978,uc001qfw.2_5end | |||
|cluster_id=chr11:130029635..130029654,+ | |||
|coexpression_cluster_id=C1334 | |||
|description=CAGE_peak_3_at_ST14_5end | |||
|id=chr11:130029635..130029654,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.43e-23!254;CL:0002076!7.95e-23!43;CL:0000223!3.32e-18!59;CL:0002251!3.05e-11!21;CL:0002368!4.84e-11!13;CL:0002159!9.23e-09!13;CL:0002202!5.04e-08!9;CL:0002632!5.04e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.77e-22;42!CL:0002368;2.98e-14;13!CL:0002251;5.29e-13;20!CL:0002202;2.96e-10;9!CL:0002632;2.96e-10;9!CL:0002159;6.66e-09;14!CL:0000082;8.28e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.69e-29,42;CL:0000066,2.16e-28,253;CL:0000223,6.83e-22,58;CL:0002368,3.00e-14,13;CL:0002251,4.89e-13,20;CL:0002202,2.83e-10,9;CL:0002632,2.83e-10,9;CL:0002159,6.47e-09,14;CL:0000082,9.06e-09,19 | |||
|ontology_enrichment_development_v019=CL:0000223;1.75e-11;58 | |||
|ontology_enrichment_disease=DOID:305!9.27e-17!106;DOID:0050687!3.17e-10!143;DOID:1749!4.36e-10!14;DOID:299!3.05e-09!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.08e-11;14!DOID:299;2.97e-10;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.51e-17,106;DOID:0050687,4.26e-12,143;DOID:1749,2.76e-11,14;DOID:299,2.61e-10,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.84e-24!169;UBERON:0000925!3.84e-24!169;UBERON:0006595!3.84e-24!169;UBERON:0001007!3.01e-20!155;UBERON:0001555!3.01e-20!155;UBERON:0007026!3.01e-20!155;UBERON:0004921!1.64e-17!129;UBERON:0004185!1.64e-17!129;UBERON:0000077!1.71e-14!130;UBERON:0000464!2.05e-14!104;UBERON:0001004!2.32e-14!72;UBERON:0000466!9.05e-13!126;UBERON:0005911!1.22e-12!82;UBERON:0005153!2.19e-11!37;UBERON:0001041!7.43e-11!98;UBERON:0000065!1.75e-10!53;UBERON:0005178!9.37e-10!34;UBERON:0002224!9.37e-10!34;UBERON:0005181!2.86e-09!35;UBERON:0000161!5.41e-09!35;UBERON:0005177!1.25e-08!107;UBERON:0005157!1.48e-08!51;UBERON:0002048!7.37e-08!22;UBERON:0000117!7.37e-08!22;UBERON:0000171!7.37e-08!22;UBERON:0000170!7.37e-08!22;UBERON:0005597!7.37e-08!22;UBERON:0000118!7.37e-08!22;UBERON:0000344!7.65e-08!12;UBERON:0006554!9.70e-08!44;UBERON:0005409!1.40e-07!35;UBERON:0004807!1.95e-07!28;UBERON:0001008!2.09e-07!45;UBERON:0000062!2.41e-07!511;UBERON:0008947!2.42e-07!38;UBERON:0003258!2.42e-07!38;UBERON:0000915!2.60e-07!52;UBERON:0000166!4.03e-07!21;UBERON:0000072!4.25e-07!46;UBERON:0009569!5.58e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0005911;1.37e-12;36!UBERON:0004807;5.92e-12;22!UBERON:0005178;1.35e-10;34!UBERON:0002224;1.35e-10;34!UBERON:0004921;1.69e-10;33!UBERON:0005181;7.37e-10;35!UBERON:0002048;1.24e-09;22!UBERON:0000117;1.24e-09;22!UBERON:0000171;1.24e-09;22!UBERON:0000170;1.24e-09;22!UBERON:0000344;2.20e-09;20!UBERON:0001555;6.19e-09;54!UBERON:0004802;8.28e-09;19!UBERON:0000115;8.28e-09;19!UBERON:0005409;1.59e-08;22!UBERON:0000365;7.91e-08;5!UBERON:0002294;3.31e-07;7!UBERON:0001173;3.31e-07;7!UBERON:0000974;4.36e-07;6!UBERON:0000486;4.48e-07;12!UBERON:0000160;5.74e-07;17!UBERON:0000065;7.40e-07;44!UBERON:0003350;9.63e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.39e-25,160;UBERON:0000925,7.39e-25,160;UBERON:0006595,7.39e-25,160;UBERON:0001007,5.16e-20,145;UBERON:0001555,5.16e-20,145;UBERON:0007026,5.16e-20,145;UBERON:0004921,8.20e-16,118;UBERON:0005911,3.18e-15,82;UBERON:0005153,1.07e-13,37;UBERON:0001004,1.72e-13,74;UBERON:0005157,9.67e-12,47;UBERON:0005178,1.32e-11,34;UBERON:0002224,1.32e-11,34;UBERON:0005181,4.19e-11,35;UBERON:0005177,1.30e-10,101;UBERON:0000065,6.27e-10,54;UBERON:0006554,8.82e-10,47;UBERON:0002048,1.53e-09,22;UBERON:0000117,1.53e-09,22;UBERON:0000171,1.53e-09,22;UBERON:0000170,1.53e-09,22;UBERON:0005597,1.53e-09,22;UBERON:0000118,1.53e-09,22;UBERON:0001008,1.94e-09,48;UBERON:0000344,2.15e-09,20;UBERON:0000161,2.59e-09,36;UBERON:0000915,7.26e-09,52;UBERON:0004802,9.06e-09,19;UBERON:0000115,9.06e-09,19;UBERON:0001041,1.66e-08,87;UBERON:0004807,2.05e-08,28;UBERON:0009569,2.31e-08,112;UBERON:0000365,7.26e-08,5;UBERON:0008947,1.72e-07,38;UBERON:0003258,1.72e-07,38;UBERON:0005409,3.07e-07,25;UBERON:0000160,4.81e-07,17;UBERON:0000166,5.51e-07,22;UBERON:0003350,9.15e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,8.3549538410513,31.4010525587592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0.154816123316076,7.35536979583142,5.4217065380085,4.43704812200145,5.57763844178172,1.56386155736164,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0.545812300115692,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0.800791974072025,0.574752439954483,0,0,0,0,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44076983047484,5.82872461268068,5.93255108455087,0,0.174129737299267,0,0.953962497221368,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,8.72188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.60456474173561,5.45492241181669,5.44928731239107,0.487894824518382,0.795178609928912,1.04574548582567,0.518305275076852,1.26160425437814,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0,6.3953988042419,0,6.03626569747441,6.74410519545717,3.82010095164197,5.27754137403619,0,0,0,0,0,0,0,0,2.37061319387782,1.71697232418975,0,0.234004265139238,0,3.74935335947108,2.35174979478403,4.25325291727159,0.447792613514241,1.16253575405585,3.4504441124869,0,0.088048434013226,0.207328115540772,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.438675231623,9.82481704486096,2.76242966807689,0,0,0,7.21919380651859,3.15762882128101,1.56869953835371,0,3.27210049567915,0,0,0,0,0,0,6.11703055308092,8.31076008928724,0.447749509444357,0,0,0,0,0,1.854738209659,0,0,9.18824860793876,4.55042172225565,0,0,0,0,0,0,0,0,0,2.31398881505369,2.69066094311149,4.59405764980503,3.2370489873776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.8111056362756,4.69211592875051,5.44454924306613,1.7887322147588,4.73555909938353,10.1082885400575,5.76459199597678,4.13502120372527,0,0,0,0,0,0,0,0,0,0,9.55656842326024,1.11481905075431,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0.307240764308458,0.223676107892416,0.333698283423817,0,0,0,0,0,0,3.55567026775618,0.146508179271894,0,0,0,2.3874448473769,1.18785872333055,0.921482106297696,0,0,0,0,0.844501632511974,0,0.828851746593443,2.01546198283421,0,0,0,12.5815691606258,1.79021174675609,0,0.394573622547734,0,0,0,0,0,1.82299432759663,6.82187999970327,0.724999575434793,3.86897724170699,7.88186315907576,3.30942754475111,0,0,0,0,0,0,0.110579259931225,0,0,0,1.95193241990045,1.23120413606075,0,3.91958637459702,2.42345639906385,4.88913173649036,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,2.61172493054636,11.3082457147153,0,2.98578579323551,1.32686346755009,1.22206028986725,0,0,0,0,0,0,2.00700268137233,2.73930466504926,0,5.12959723704208,2.41981432097328,0,0,0,0,0,0,0,0,1.70765727617876,0,9.37222587009707,2.6457947301882,4.00472350269852,2.97035336011451,0,0,0,0,2.81268147816416,0,0.90392296312213,0,0,0,4.30213042016567,6.6531820808773,2.77488893161158,0.599428828746391,4.46680293177729,0,0,0.288109595976299,0,3.77110455386873,0,0,0,0,0,0,0,0,0,0,0,0,15.9743200399193,0,0,0,0,0,0,0,0,0,0,0,0,2.08979093004525,2.47570985875021,2.07720169014593,1.5748172408605,0.77380195455795,0.0607495566580247,1.67717343799633,4.4919253160543,3.14727528809989,0,0,1.34340638123612,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,5.63852017853338,1.49502377594773,0.628817220398664,2.07119527673598,0,0,1.21792598380896,2.55336503108073,0,0,0,0,6.12510975375914,0,0,0,0,0,0,0,0,0,0,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07220795687463,0,0,0,0,0,0.926404341482917,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,4.22624246717254,0,0,0,0,0,2.65771064666944,2.48830904013189,0,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,0,0,0,0.205116364240755,0,0.138314504928436,0.484426936895553,0,2.64998839952769,5.89848616738702,1.28400018965175,3.69682131681082,0,0,0,0.225630985047772,0,2.34454203369928,6.02385397307272,0,10.4977821214102,0.0675375846183947,0,0,0.0634158101939068,0,2.19303106742873,0,0,3.44958554626907,0,0,3.03482802118316,3.87025725297206,2.7497734750418,0,0,0,0,1.53651993149159,3.33694205676207,1.96232732126285,0,9.80952571598262,1.82631744101899,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,1.38251932362818,2.58136415292167,0,0,5.08064460229115,2.06196181689645,0,0,2.57267493134922,6.87051635306701,5.9739783241312,0,0,0,1.45713297917742,6.78424444040106,2.98426162742052,0,4.63078936359736,0,8.90680777043374,2.62392137567012,5.24542945209498,5.17349025997675,0,2.82811856521951,0,0,0,0,0.0939839179798536,0.193373663920732,0,1.42843150884526,0,8.18461940229516,2.92134555298607,0.917458566809082,0,0,0.0679914901909147,0,2.645134202577,0,0,0,0,0,0,1.22386595690378,0.534434810531121,0.918948995348449,0.752122617877125,0.4546721893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| ||
|short_description=p3@ST14 | |||
}} | }} |
Latest revision as of 18:18, 16 September 2015
Short description: | p3@ST14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ST14_5end |
Coexpression cluster: | C1334_Alveolar_gall_Renal_nasal_Prostate_signet_colon |
Association with transcript: | -27bp_to_NM_021978, uc001qfw.2_5end |
EntrezGene: | ST14 |
HGNC: | 11344 |
UniProt: | Q9Y5Y6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 6.69e-29 | 42 |
epithelial cell | 2.16e-28 | 253 |
endodermal cell | 6.83e-22 | 58 |
respiratory epithelial cell | 3.00e-14 | 13 |
epithelial cell of alimentary canal | 4.89e-13 | 20 |
epithelial cell of tracheobronchial tree | 2.83e-10 | 9 |
epithelial cell of lower respiratory tract | 2.83e-10 | 9 |
general ecto-epithelial cell | 6.47e-09 | 14 |
epithelial cell of lung | 9.06e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.51e-17 | 106 |
cell type cancer | 4.26e-12 | 143 |
squamous cell carcinoma | 2.76e-11 | 14 |
adenocarcinoma | 2.61e-10 | 25 |