FFCP PHASE1:Hg19::chr11:27406931..27406973,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:27406931..27406973,- to FFCP PHASE1:Hg19::chr11:27406931..27406973,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55366 | |EntrezGene=55366 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13299 | |HGNC=13299 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=105bp_to_ENST00000527773_5end | |||
|cluster_id=chr11:27406931..27406973,- | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_7_at_LGR4_5end | |||
|id=chr11:27406931..27406973,- | |||
|ontology_enrichment_celltype=CL:0002620!3.55e-16!23;CL:0000057!1.27e-13!75 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.24e-13;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,4.03e-13,23;CL:0000057,4.71e-10,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;7.61e-07;5!DOID:450;7.61e-07;5!DOID:66;7.61e-07;5!DOID:423;7.61e-07;5!DOID:0080000;7.61e-07;5!DOID:11722;7.61e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,8.37e-07,5;DOID:450,8.37e-07,5;DOID:66,8.37e-07,5;DOID:423,8.37e-07,5;DOID:0080000,8.37e-07,5;DOID:11722,8.37e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!3.20e-08!40;UBERON:0002199!6.38e-07!45;UBERON:0002416!6.38e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.12e-09;9!UBERON:0001557;4.12e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.81e-09,9;UBERON:0002097,6.05e-08,41;UBERON:0002199,7.64e-07,46;UBERON:0002416,7.64e-07,46 | |||
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| ||
|short_description=p7@LGR4 | |||
}} | }} |
Latest revision as of 12:07, 17 September 2015
Short description: | p7@LGR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LGR4_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 105bp_to_ENST00000527773_5end |
EntrezGene: | LGR4 |
HGNC: | 13299 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 4.03e-13 | 23 |
fibroblast | 4.71e-10 | 76 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.81e-09 | 9 |
skin of body | 6.05e-08 | 41 |
integument | 7.64e-07 | 46 |
integumental system | 7.64e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.37e-07 | 5 |
myotonic disease | 8.37e-07 | 5 |
muscle tissue disease | 8.37e-07 | 5 |
myopathy | 8.37e-07 | 5 |
muscular disease | 8.37e-07 | 5 |
myotonic dystrophy | 8.37e-07 | 5 |