FFCP PHASE1:Hg19::chr11:40314652..40314669,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:40314652..40314669,- to FFCP PHASE1:Hg19::chr11:40314652..40314669,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57689 | |EntrezGene=57689 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29317 | |HGNC=29317 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=10bp_to_ENST00000527150_5end | |||
|cluster_id=chr11:40314652..40314669,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_8_at_LRRC4C_5end | |||
|id=chr11:40314652..40314669,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.84e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.77e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0010122;4.10e-15;2!UBERON:0006601;1.33e-12;82!UBERON:0006222;6.62e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.70e-60!90;UBERON:0001049!1.03e-59!57;UBERON:0005068!1.03e-59!57;UBERON:0006241!1.03e-59!57;UBERON:0007135!1.03e-59!57;UBERON:0003075!1.70e-58!86;UBERON:0007284!1.70e-58!86;UBERON:0001017!1.77e-54!82;UBERON:0005743!1.86e-53!86;UBERON:0002616!1.93e-51!59;UBERON:0002780!4.48e-51!41;UBERON:0001890!4.48e-51!41;UBERON:0006240!4.48e-51!41;UBERON:0003080!1.26e-49!42;UBERON:0000073!2.77e-49!94;UBERON:0001016!2.77e-49!94;UBERON:0007023!4.80e-47!115;UBERON:0000955!2.83e-46!69;UBERON:0006238!2.83e-46!69;UBERON:0001893!2.65e-45!34;UBERON:0002020!3.08e-45!34;UBERON:0003528!3.08e-45!34;UBERON:0002791!2.91e-43!33;UBERON:0001869!3.63e-42!32;UBERON:0003056!8.29e-42!61;UBERON:0000924!1.32e-35!173;UBERON:0006601!1.32e-35!173;UBERON:0004121!4.66e-34!169;UBERON:0000033!6.87e-31!123;UBERON:0000153!8.92e-29!129;UBERON:0007811!8.92e-29!129;UBERON:0000956!1.00e-28!25;UBERON:0000203!1.00e-28!25;UBERON:0002619!2.86e-27!22;UBERON:0001950!6.65e-27!20;UBERON:0002420!3.41e-19!9;UBERON:0007245!3.41e-19!9;UBERON:0010009!3.41e-19!9;UBERON:0010011!3.41e-19!9;UBERON:0000454!3.41e-19!9;UBERON:0002308!1.50e-18!9;UBERON:0000125!1.50e-18!9;UBERON:0000025!4.42e-17!194;UBERON:0009663!2.53e-15!7;UBERON:0000477!1.41e-13!286;UBERON:0001871!8.84e-13!7;UBERON:0004111!2.88e-12!241;UBERON:0000483!4.56e-12!309;UBERON:0000119!8.59e-12!312;UBERON:0002298!1.30e-11!8;UBERON:0003076!2.46e-11!15;UBERON:0003057!2.46e-11!15;UBERON:0000064!1.03e-10!219;UBERON:0000369!3.73e-10!4;UBERON:0002435!3.73e-10!4;UBERON:0000204!3.73e-10!4;UBERON:0010082!3.73e-10!4;UBERON:0000200!2.59e-09!6;UBERON:0000062!6.89e-09!511;UBERON:0000481!2.36e-08!347;UBERON:0005383!5.17e-08!3;UBERON:0005382!5.17e-08!3;UBERON:0000475!8.50e-08!365;UBERON:0001872!1.05e-07!5;UBERON:0000349!1.20e-07!5;UBERON:0001894!2.86e-07!7;UBERON:0006222!2.86e-07!7;UBERON:0002021!2.88e-07!5;UBERON:0000922!3.14e-07!612;UBERON:0002771!3.80e-07!3;UBERON:0000923!3.83e-07!604;UBERON:0005291!3.83e-07!604;UBERON:0006598!3.83e-07!604;UBERON:0002532!3.83e-07!604;UBERON:0004733!4.26e-07!12;UBERON:0002028!4.26e-07!12;UBERON:0007277!4.26e-07!12;UBERON:0002050!4.28e-07!605;UBERON:0005423!4.28e-07!605;UBERON:0002240!7.93e-07!3;UBERON:0003978!9.13e-07!3;UBERON:0009751!9.13e-07!3;UBERON:0000946!9.13e-07!3;UBERON:0002523!9.13e-07!3;UBERON:0005983!9.13e-07!3;UBERON:0002165!9.13e-07!3;UBERON:0002062!9.13e-07!3;UBERON:0007280!9.13e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;8.99e-50;32!UBERON:0001893;7.35e-46;34!UBERON:0002791;8.22e-46;32!UBERON:0002780;1.24e-39;41!UBERON:0001890;1.24e-39;41!UBERON:0002619;1.89e-39;22!UBERON:0003528;4.76e-39;34!UBERON:0002020;4.76e-39;34!UBERON:0001950;1.79e-36;20!UBERON:0000956;1.20e-34;25!UBERON:0000203;1.20e-34;25!UBERON:0000369;2.21e-28;4!UBERON:0002435;2.21e-28;4!UBERON:0000204;2.21e-28;4!UBERON:0000073;4.54e-23;53!UBERON:0002616;4.54e-23;53!UBERON:0005383;1.12e-21;3!UBERON:0005382;1.12e-21;3!UBERON:0002420;3.87e-19;9!UBERON:0007245;3.87e-19;9!UBERON:0010009;3.87e-19;9!UBERON:0010011;3.87e-19;9!UBERON:0000454;3.87e-19;9!UBERON:0009663;2.60e-16;7!UBERON:0001873;4.10e-15;2!UBERON:0001017;1.25e-14;75!UBERON:0000955;2.03e-13;68!UBERON:0001016;2.72e-13;83!UBERON:0000349;9.95e-13;5!UBERON:0000125;1.01e-12;9!UBERON:0002308;1.01e-12;9!UBERON:0001872;1.21e-12;5!UBERON:0002021;1.21e-12;5!UBERON:0007023;1.95e-11;114!UBERON:0000200;1.28e-10;6!UBERON:0001870;5.60e-10;3!UBERON:0001882;1.84e-08;1!UBERON:0005403;1.84e-08;1!UBERON:0002022;2.61e-08;1!UBERON:0001874;2.61e-08;1!UBERON:0007190;2.61e-08;1!UBERON:0011216;5.31e-08;132!UBERON:0002581;6.62e-08;1!UBERON:0002902;6.62e-08;1!UBERON:0002134;6.62e-08;1!UBERON:0005208;6.62e-08;1!UBERON:0009899;6.62e-08;1!UBERON:0004145;6.62e-08;1!UBERON:0005946;6.62e-08;1!UBERON:0005965;6.62e-08;1!UBERON:0002078;6.62e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.01e-55,32;UBERON:0002780,5.29e-54,41;UBERON:0001890,5.29e-54,41;UBERON:0003080,5.29e-54,41;UBERON:0006240,5.29e-54,41;UBERON:0001893,2.39e-52,34;UBERON:0002791,4.12e-49,32;UBERON:0003528,3.98e-46,34;UBERON:0002020,3.98e-46,34;UBERON:0001049,3.25e-43,56;UBERON:0005068,3.25e-43,56;UBERON:0006241,3.25e-43,56;UBERON:0007135,3.25e-43,56;UBERON:0000073,3.50e-41,53;UBERON:0002616,3.50e-41,53;UBERON:0002619,1.85e-39,22;UBERON:0001950,1.47e-36,20;UBERON:0003056,2.17e-35,61;UBERON:0001017,8.61e-35,81;UBERON:0000956,1.17e-34,25;UBERON:0000203,1.17e-34,25;UBERON:0000955,2.20e-34,68;UBERON:0006238,2.20e-34,68;UBERON:0001016,4.01e-34,89;UBERON:0003075,1.39e-31,82;UBERON:0007284,1.39e-31,82;UBERON:0002346,6.05e-30,86;UBERON:0000369,2.30e-28,4;UBERON:0002435,2.30e-28,4;UBERON:0000204,2.30e-28,4;UBERON:0010082,2.30e-28,4;UBERON:0010371,4.12e-24,104;UBERON:0007023,6.80e-22,114;UBERON:0005383,1.12e-21,3;UBERON:0005382,1.12e-21,3;UBERON:0002420,3.41e-19,9;UBERON:0007245,3.41e-19,9;UBERON:0010009,3.41e-19,9;UBERON:0010011,3.41e-19,9;UBERON:0000454,3.41e-19,9;UBERON:0010314,3.61e-18,132;UBERON:0004121,1.17e-17,171;UBERON:0000924,1.17e-17,171;UBERON:0006601,1.17e-17,171;UBERON:0009663,2.66e-16,7;UBERON:0011216,2.75e-15,223;UBERON:0001873,3.45e-15,2;UBERON:0010122,3.45e-15,2;UBERON:0001872,5.79e-13,5;UBERON:0000125,1.03e-12,9;UBERON:0002308,1.03e-12,9;UBERON:0000349,1.06e-12,5;UBERON:0000025,1.25e-12,192;UBERON:0002021,1.40e-12,5;UBERON:0000200,1.30e-10,6;UBERON:0001870,8.21e-10,3;UBERON:0004111,2.97e-09,240;UBERON:0001882,1.91e-08,1;UBERON:0005403,1.91e-08,1;UBERON:0002022,2.35e-08,1;UBERON:0007190,2.71e-08,1;UBERON:0001874,3.11e-08,1;UBERON:0002581,3.58e-08,1;UBERON:0002134,6.19e-08,1;UBERON:0005208,6.19e-08,1;UBERON:0005946,6.19e-08,1;UBERON:0005965,6.19e-08,1;UBERON:0002078,6.19e-08,1;UBERON:0002902,7.59e-08,1;UBERON:0009899,7.59e-08,1 | |||
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|short_description=p8@LRRC4C | |||
}} | }} |
Latest revision as of 22:52, 17 September 2015
Short description: | p8@LRRC4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LRRC4C_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 10bp_to_ENST00000527150_5end |
EntrezGene: | LRRC4C |
HGNC: | 29317 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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lung fibroblast | 1.77e-08 | 1 |