FFCP PHASE1:Hg19::chr11:58874174..58874212,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:58874174..58874212,- to FFCP PHASE1:Hg19::chr11:58874174..58874212,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:58874174..58874212,- | |||
|description=CAGE_peak_at_chr11:58874174..58874212,- | |||
|id=chr11:58874174..58874212,- | |||
|ontology_enrichment_celltype=CL:0000945!2.45e-15!24;CL:0000826!2.45e-15!24;CL:0000236!1.03e-09!14;CL:0000542!5.12e-07!53;CL:0000051!5.12e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.23e-25;13!CL:0000945;3.06e-25;24!CL:0000542;1.04e-10;53!CL:0002032;4.31e-07;1!CL:0000557;4.31e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,8.16e-30,14;CL:0000945,3.51e-25,24;CL:0000826,3.51e-25,24;CL:0000542,2.08e-14,53;CL:0000051,2.08e-14,53;CL:0000838,1.56e-12,52;CL:0002087,3.34e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000051;1.04e-10;53 | |||
|ontology_enrichment_disease=DOID:162!9.25e-13!235;DOID:14566!1.93e-12!239;DOID:305!7.30e-11!106;DOID:0050687!1.38e-10!143 | |||
|ontology_enrichment_disease_v019=DOID:1325;1.81e-07;7!DOID:3904;1.81e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,1.49e-07,7;DOID:3904,1.49e-07,7;DOID:0060085,7.19e-07,1;DOID:3165,7.19e-07,1;DOID:0060121,7.19e-07,1;DOID:2438,7.19e-07,1;DOID:4418,7.19e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002114;6.02e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002114,7.46e-08,2 | |||
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| ||
|short_description=p@chr11:58874174..58874212,- | |||
}} | }} |
Latest revision as of 23:06, 23 July 2015
Short description: | p@chr11:58874174..58874212, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:58874174..58874212, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 8.16e-30 | 14 |
lymphocyte of B lineage | 3.51e-25 | 24 |
pro-B cell | 3.51e-25 | 24 |
lymphocyte | 2.08e-14 | 53 |
common lymphoid progenitor | 2.08e-14 | 53 |
lymphoid lineage restricted progenitor cell | 1.56e-12 | 52 |
nongranular leukocyte | 3.34e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
duodenum | 7.46e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 1.49e-07 | 7 |
bronchogenic carcinoma | 1.49e-07 | 7 |
organ system benign neoplasm | 7.19e-07 | 1 |
skin benign neoplasm | 7.19e-07 | 1 |
integumentary system benign neoplasm | 7.19e-07 | 1 |
dermis tumor | 7.19e-07 | 1 |
cutaneous fibrous histiocytoma | 7.19e-07 | 1 |