FFCP PHASE1:Hg19::chr11:60609453..60609467,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:60609453..60609467,+ to FFCP PHASE1:Hg19::chr11:60609453..60609467,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79080 | |EntrezGene=79080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28359 | |HGNC=28359 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H6F5 | |UniProt=Q9H6F5 | ||
|association_with_transcript=24bp_to_NM_024098,uc001nqa.2_5end | |||
|cluster_id=chr11:60609453..60609467,+ | |||
|description=CAGE_peak_4_at_CCDC86_5end | |||
|id=chr11:60609453..60609467,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.11e-20!115;UBERON:0001049!1.42e-08!57;UBERON:0005068!1.42e-08!57;UBERON:0006241!1.42e-08!57;UBERON:0007135!1.42e-08!57;UBERON:0003076!3.00e-08!15;UBERON:0003057!3.00e-08!15;UBERON:0002346!1.73e-07!90;UBERON:0003075!2.11e-07!86;UBERON:0007284!2.11e-07!86;UBERON:0002616!3.61e-07!59;UBERON:0004733!4.45e-07!12;UBERON:0002028!4.45e-07!12;UBERON:0007277!4.45e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004733;4.85e-12;12!UBERON:0002028;4.85e-12;12!UBERON:0004732;6.12e-11;13!UBERON:0002680;1.00e-10;9!UBERON:0001895;1.00e-10;9!UBERON:0000073;7.60e-08;53!UBERON:0002616;7.60e-08;53!UBERON:0003688;3.63e-07;6!UBERON:0002358;3.63e-07;6!UBERON:0003684;3.63e-07;6!UBERON:0001178;3.63e-07;6!UBERON:0002037;7.97e-07;6!UBERON:0002298;7.97e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.34e-16,114;UBERON:0001049,3.44e-12,56;UBERON:0005068,3.44e-12,56;UBERON:0006241,3.44e-12,56;UBERON:0007135,3.44e-12,56;UBERON:0004733,4.71e-12,12;UBERON:0002028,4.71e-12,12;UBERON:0007277,4.71e-12,12;UBERON:0000073,5.60e-12,53;UBERON:0002616,5.60e-12,53;UBERON:0003076,2.68e-11,15;UBERON:0003057,2.68e-11,15;UBERON:0003075,2.78e-11,82;UBERON:0007284,2.78e-11,82;UBERON:0010314,3.92e-11,132;UBERON:0004732,5.95e-11,13;UBERON:0002680,1.61e-10,9;UBERON:0001895,1.61e-10,9;UBERON:0010092,1.61e-10,9;UBERON:0002346,2.20e-10,86;UBERON:0000955,1.57e-09,68;UBERON:0006238,1.57e-09,68;UBERON:0010371,2.18e-09,104;UBERON:0001017,1.32e-08,81;UBERON:0001016,4.30e-07,89;UBERON:0002298,7.45e-07,6;UBERON:0002037,8.28e-07,6;UBERON:0006215,8.28e-07,6 | |||
|phase1_expression=1.99846217197612,0.428201047781966,0.563817616383885,1.0007329835313,1.34088328328186,2.61701557230111,0,0,0,0.491467873003018,4.18680700783456,0,0.263766978228454,0.495065411840187,0.662794751455832,0,1.80808358407193,0,0,1.10808952269109,0.816002764977012,1.88072832886853,0,0.273748850145768,0,0,0.164201178899891,0.0787107813136792,0,0.383829398097213,0.464448369948228,0,0.90361775633475,0.369754010166788,0.232401601740905,0.142169232487422,0,0.553995408531877,0.401088894940283,0.217010870715852,0.671746422719773,0.32389366601898,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0.272906150057846,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0.211255286311942,0.850417199860174,0.419317291016752,1.01095768031846,0.300353785683013,0,0.855038231223746,0.59675003159727,0,0,1.09227722252426,0.889509253863555,0.426730222566507,0.400395987036012,0,0.661044872784862,0,0.569212969109448,0,0,0,1.12101712596307,0,0,0,0,0.167186495390678,0.32592226663359,0.473447805734733,0,0.334231370655521,0,0,0,0,0.260118695119756,0.328875809207352,0.829050053357545,0,0.444859689486181,0.535081656179426,0,0,0,0,0.759059076058509,0,0,2.85135613334512,0.301150238155546,0.895906278080929,1.24930726552346,0.236777252044017,0,0,0,0,0,0,0,0,1.00267582127178,0.289693037921647,0,0.486634870302636,0.567208902984407,0.665188192387692,0.087834785693126,0.327447688744282,1.82147644146271,0,0,0.174129737299267,0,0.238490624305342,0,0,0,0,0,0,0,0,0.208994966536811,1.03366703667732,0,0.66944122552934,0,0,0,0,0,0.17859945656816,0,0.225222960966644,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0.132409180813219,0.286836620748814,1.06400514659507,0,1.06748995729705,0.74000264525148,0,0.808264032418128,0,1.21085942115945,0.576175924479999,0.468642863667593,0,0,0.298897361103602,0.469737994575059,0.323745888736263,0.280901613404497,0.204154171254893,0,0.103325781175765,0,0.741800787835671,0.910161361938026,0,0,0,0,0.438977620880838,0,0.45071417671979,0.113432183160021,0,0.85422955527427,1.05965950579781,0,0,0,0.18611685633159,0,0.292311015483596,0.252433774244115,0.460249493211497,0.484938170456436,1.06502877754984,0.10075209822764,0.169560592310488,1.35282597214308,0,0.573609190778008,0,0,0,0.10366105501537,0.252320850875628,0,1.56449532329816,0,0,0,0,0,0,0,0.220587945464788,0.217879444092406,0.237270619111097,0.269662616320329,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0.590789906681404,1.7658523976586,0.245976877086227,0.171567810298526,0.219500570817251,1.1240175325762,0.100528972411631,0.925884451585296,0.325808305310325,0,0,0.579652024875384,0,0,0,0.190254152234598,0,0,0.246217006087397,0.702012795417713,0.148631162288728,1.87467667973554,0.671928512795438,0.141775097242386,0.268675568108545,0.871901815541886,0.383382679165211,0.492663237895943,0,0,0.432359860250884,0.37872730027914,0.444485260045183,1.14596527667483,0,0,0.411309970813294,0.300343057843917,0.285826432630578,0.224262168690721,0,0.22001485746285,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,1.41849132023278,0,0.428933980974443,2.17048642156577,0,0,0.355391948742546,0,0.904318131178758,0.871533458600294,0.299918973546171,0,1.00451418286425,0,0.479249710983165,0,2.85273810081437,0.144781306667579,0.61642896765115,0.179060963239896,0.224170287987055,0,0.215627574859517,0.385029108839245,0,0,1.54657762555539,0,0,0,0,0,0.613457458595699,0.500170521059677,0.271265023699736,0.623912584592421,0.178428988797162,0.630809660135739,0.585707074963566,0.902838299183157,0,0,0,0.737476674166813,0.0868836144680828,1.76221041716467,3.0882908142977,0.413536052245775,0.431428401637234,0.320182673410333,0.909382714338778,0,0.30239029332968,1.48864684691266,0.153461973288062,0.841980283299221,1.15325234330131,2.55853624533352,1.12597744800525,2.96836132889982,0.154209693802656,0.177561725313127,0.246381468041427,0,0,0.241718899183244,0.601519410909855,0.460404944679482,0.34444334449382,0,0.131124414959424,1.35359883872224,0.231046011313244,0,0,0,0,0.170093705276516,0.215915916102139,0,0.270946437543853,1.50506932156456,1.01950509218015,2.49322802678617,0.671624264166535,0,0,0.256450125116389,0,1.30151357865721,1.64865618636356,0,0,0,0,0,0.48335359146061,0.308097234229289,0.307007349452259,0.137836572484531,0.214840489736547,0.145016693914229,0.170453254832202,0.445160178233687,0,0,0.127612712494584,0.2023155617111,0,0,0,0.308033580176089,0,0,0.37064843820784,0.429374660225974,0,0,0.190630193923825,0,0.42793898803392,0.636406495851874,0,0.359744915166629,0.274537029736055,0.235624804691373,0,1.58510321173008,1.68503382495592,0.48763373908959,0.243713489631284,0,0.136499911407986,0.424216295861138,0,0,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0.354761064070598,0.844430541190656,0.658589785919804,0,1.39973888097993,0.384888450902048,1.34060455107157,1.08890984861323,1.12972560932135,0,1.68471475667626,0.443430153536676,0,0.507447609232169,1.52927441428475,1.13929437434833,0.7146953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| ||
|short_description=p4@CCDC86 | |||
}} | }} |
Latest revision as of 14:00, 18 September 2015
Short description: | p4@CCDC86 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CCDC86_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_NM_024098, uc001nqa.2_5end |
EntrezGene: | CCDC86 |
HGNC: | 28359 |
UniProt: | Q9H6F5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.34e-16 | 114 |
neural tube | 3.44e-12 | 56 |
neural rod | 3.44e-12 | 56 |
future spinal cord | 3.44e-12 | 56 |
neural keel | 3.44e-12 | 56 |
segmental subdivision of hindbrain | 4.71e-12 | 12 |
hindbrain | 4.71e-12 | 12 |
presumptive hindbrain | 4.71e-12 | 12 |
regional part of nervous system | 5.60e-12 | 53 |
regional part of brain | 5.60e-12 | 53 |
posterior neural tube | 2.68e-11 | 15 |
chordal neural plate | 2.68e-11 | 15 |
neural plate | 2.78e-11 | 82 |
presumptive neural plate | 2.78e-11 | 82 |
structure with developmental contribution from neural crest | 3.92e-11 | 132 |
segmental subdivision of nervous system | 5.95e-11 | 13 |
regional part of metencephalon | 1.61e-10 | 9 |
metencephalon | 1.61e-10 | 9 |
future metencephalon | 1.61e-10 | 9 |
neurectoderm | 2.20e-10 | 86 |
brain | 1.57e-09 | 68 |
future brain | 1.57e-09 | 68 |
ecto-epithelium | 2.18e-09 | 104 |
central nervous system | 1.32e-08 | 81 |
nervous system | 4.30e-07 | 89 |
brainstem | 7.45e-07 | 6 |
cerebellum | 8.28e-07 | 6 |
rhombic lip | 8.28e-07 | 6 |