FFCP PHASE1:Hg19::chr11:71900740..71900772,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:71900740..71900772,+ to FFCP PHASE1:Hg19::chr11:71900740..71900772,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2348 | |EntrezGene=2348 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3791 | |HGNC=3791 | ||
|TSSclassifier=strong | |||
|UniProt=P15328 | |UniProt=P15328 | ||
|association_with_transcript=28bp_to_ENST00000393681_5end | |||
|cluster_id=chr11:71900740..71900772,+ | |||
|coexpression_cluster_id=C160 | |||
|description=CAGE_peak_3_at_FOLR1_5end | |||
|id=chr11:71900740..71900772,+ | |||
|ontology_enrichment_celltype=CL:1000497!2.44e-07!18;CL:0002518!2.44e-07!18;CL:1000507!3.27e-07!12;CL:1000494!3.27e-07!12;CL:1000449!3.88e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.30e-13;10!CL:1000494;1.30e-13;10!CL:1000497;2.60e-13;17!CL:0002518;2.60e-13;17!CL:1000449;1.19e-12;15!CL:0002681;7.80e-09;12!CL:0002584;7.80e-09;12!CL:0002541;5.92e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.38e-13,10;CL:1000494,1.38e-13,10;CL:1000497,2.84e-13,17;CL:0002518,2.84e-13,17;CL:1000449,1.30e-12,15;CL:0002681,8.91e-09,12;CL:0002584,8.91e-09,12;CL:0002541,5.54e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.79e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!4.33e-21!86;UBERON:0001049!3.08e-20!57;UBERON:0005068!3.08e-20!57;UBERON:0006241!3.08e-20!57;UBERON:0007135!3.08e-20!57;UBERON:0001017!8.33e-20!82;UBERON:0000955!1.14e-18!69;UBERON:0006238!1.14e-18!69;UBERON:0000073!5.27e-18!94;UBERON:0001016!5.27e-18!94;UBERON:0002616!7.39e-16!59;UBERON:0007023!1.58e-15!115;UBERON:0003075!2.27e-14!86;UBERON:0007284!2.27e-14!86;UBERON:0002780!3.30e-14!41;UBERON:0001890!3.30e-14!41;UBERON:0006240!3.30e-14!41;UBERON:0002346!3.31e-14!90;UBERON:0003080!1.27e-13!42;UBERON:0000062!2.55e-13!511;UBERON:0000475!1.66e-11!365;UBERON:0000153!7.45e-11!129;UBERON:0007811!7.45e-11!129;UBERON:0000033!9.57e-11!123;UBERON:0002020!7.15e-10!34;UBERON:0003528!7.15e-10!34;UBERON:0000481!7.17e-10!347;UBERON:0003056!1.00e-09!61;UBERON:0001893!1.11e-09!34;UBERON:0002791!1.89e-09!33;UBERON:0000489!1.90e-09!32;UBERON:0000468!4.03e-09!659;UBERON:0002113!4.57e-09!27;UBERON:0003918!4.57e-09!27;UBERON:0005095!4.57e-09!27;UBERON:0007687!4.57e-09!27;UBERON:0001869!1.21e-08!32;UBERON:0000467!1.56e-08!625;UBERON:0000480!1.94e-08!626;UBERON:0003076!4.66e-08!15;UBERON:0003057!4.66e-08!15;UBERON:0000064!5.09e-08!219;UBERON:0006555!6.21e-08!17;UBERON:0005103!6.21e-08!17;UBERON:0000083!6.21e-08!17;UBERON:0009201!6.21e-08!17;UBERON:0004819!6.21e-08!17;UBERON:0006553!6.21e-08!17;UBERON:0003074!6.21e-08!17;UBERON:0003060!6.21e-08!17;UBERON:0000924!1.76e-07!173;UBERON:0006601!1.76e-07!173;UBERON:0004121!2.08e-07!169;UBERON:0003124!2.41e-07!7;UBERON:0000025!2.54e-07!194;UBERON:0000080!2.94e-07!18;UBERON:0002120!2.94e-07!18;UBERON:0004875!2.94e-07!18;UBERON:0005721!2.94e-07!18;UBERON:0005754!2.94e-07!18;UBERON:0007297!2.94e-07!18;UBERON:0009773!3.27e-07!12;UBERON:0001231!3.27e-07!12;UBERON:0004810!3.27e-07!12;UBERON:0004211!3.88e-07!16;UBERON:0001285!3.88e-07!16;UBERON:0007684!3.88e-07!16;UBERON:0003220!3.88e-07!16;UBERON:0004208!3.88e-07!16;UBERON:0001894!6.76e-07!7;UBERON:0006222!6.76e-07!7;UBERON:0000483!7.20e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.30e-13;10!UBERON:0009773;1.30e-13;10!UBERON:0001231;1.30e-13;10!UBERON:0004810;1.30e-13;10!UBERON:0006555;1.19e-12;15!UBERON:0004819;1.19e-12;15!UBERON:0001285;1.19e-12;15!UBERON:0007684;1.19e-12;15!UBERON:0002113;2.50e-12;24!UBERON:0011143;2.50e-12;24!UBERON:0000489;5.55e-11;29!UBERON:0001894;2.53e-09;7!UBERON:0006554;3.91e-09;30!UBERON:0001008;3.91e-09;30!UBERON:0001225;7.80e-09;12!UBERON:0008987;7.80e-09;12!UBERON:0002298;1.95e-08;6!UBERON:0003296;8.50e-08;4!UBERON:0010133;8.50e-08;4!UBERON:0001896;1.45e-07;3!UBERON:0005290;1.45e-07;3!UBERON:0000073;2.08e-07;53!UBERON:0002616;2.08e-07;53!UBERON:0003124;5.92e-07;3!UBERON:0000920;5.92e-07;3!UBERON:0000955;6.22e-07;68!UBERON:0001851;9.31e-07;15!UBERON:0000353;9.31e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006555,4.03e-14,16;UBERON:0004819,4.03e-14,16;UBERON:0004810,1.38e-13,10;UBERON:0002113,6.20e-13,26;UBERON:0003918,6.20e-13,26;UBERON:0011143,6.20e-13,26;UBERON:0005095,6.20e-13,26;UBERON:0007687,6.20e-13,26;UBERON:0001017,8.24e-13,81;UBERON:0004211,1.30e-12,15;UBERON:0009773,1.30e-12,15;UBERON:0001231,1.30e-12,15;UBERON:0001285,1.30e-12,15;UBERON:0007684,1.30e-12,15;UBERON:0004208,1.30e-12,15;UBERON:0003124,3.22e-12,7;UBERON:0000489,1.14e-11,31;UBERON:0001049,3.58e-11,56;UBERON:0005068,3.58e-11,56;UBERON:0006241,3.58e-11,56;UBERON:0007135,3.58e-11,56;UBERON:0000955,4.74e-11,68;UBERON:0006238,4.74e-11,68;UBERON:0000073,5.58e-11,53;UBERON:0002616,5.58e-11,53;UBERON:0001016,9.69e-11,89;UBERON:0006554,1.49e-10,47;UBERON:0001008,3.20e-10,48;UBERON:0001894,2.58e-09,7;UBERON:0006222,2.58e-09,7;UBERON:0007023,5.85e-09,114;UBERON:0001225,8.91e-09,12;UBERON:0008987,8.91e-09,12;UBERON:0005172,1.24e-08,54;UBERON:0005173,1.24e-08,54;UBERON:0002298,2.34e-08,6;UBERON:0000025,8.46e-08,192;UBERON:0003296,9.00e-08,4;UBERON:0010133,9.00e-08,4;UBERON:0001896,1.47e-07,3;UBERON:0005290,1.47e-07,3;UBERON:0010096,1.47e-07,3;UBERON:0002780,2.22e-07,41;UBERON:0001890,2.22e-07,41;UBERON:0003080,2.22e-07,41;UBERON:0006240,2.22e-07,41;UBERON:0002417,2.85e-07,60;UBERON:0000916,2.85e-07,60;UBERON:0005631,4.78e-07,14;UBERON:0000158,4.78e-07,14;UBERON:0000920,5.54e-07,3;UBERON:0001987,6.19e-07,4;UBERON:0004340,6.19e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,2.09340350391728,0.218441372130172,0,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0.85870796139317,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,23.4452545140906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,1.68203280042692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0.877955241761676,0,0.150238058906597,0,1.25572744982203,5.12537733164562,0.847727604638247,0.300091096084402,0.309157587715317,0.257640540045629,0.37223371266318,0.168776332241266,0.194874010322397,0,0.644349290496095,0.323292113637624,3.55009592516614,0.806016785821122,0.169560592310488,0,0,0,0,0,1.39432731443422,1.14027160516907,1.00928340350251,0.72995471815166,0,2.57296375277154,0,0,0,0.709840800239063,0.168584690078102,0.482022059766964,0.55146986366197,0.653638332277218,0.237270619111097,0.539325232640658,0.392442930250692,0,0,0,0.4115740113314,4.41026134156626,0,0,0,0,4.30459534900897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0,1.30139853857622,0,0,1.27587750330633,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,5.83343820478455,0,0,0,1.5156378572313,1.66435439510497,2.41912234663744,0,0.460385919864187,0.561320188866147,0.128139149255701,0,0.160853921143607,1.48418066444991,0,0,0,0,0,11.1190693624292,0,0,0.114814448164607,0,0.131124414959424,4.06079651616671,3.00359814707218,4.70609861506113,1.46139224653261,3.16654886678627,0,0,0,4.62681758070868,0.270946437543853,8.02703638167765,10.1950509218015,8.31076008928724,3.58199607555485,0,0,0.769350375349168,0,0.650756789328606,2.98818933778395,3.20493126864202,6.10570299412351,0,0,0,1.54673149267395,0.154048617114644,1.22802939780904,1.37836572484531,0,1.0151168573996,1.02271952899321,23.8605855533256,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,2.91845782408015,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0.962479855263359,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,1.48482340416319,0,0,0,0,0,0.211125408127993,0.398495976502139,0,2.26739473068848,0,0,0,1.16828856491525,0,0,0,0,0,8.72399471485697,3.6179558283122,1.99613798001194,0,0,0,0,0,0,0,0,0,11.5146380155799,2.53252521113357,0,0.552896299656123,3.84211904639612,30.7139556015562,0,0,3.38581137416707,0,3.68902247020896,19.0286206148717,9.56096872913671,14.0360510282045,11.9076871422421,9.59462596833542,0,0,0,0,0,0,0,0,0.210998064528027,11.4262965711403,29.9668511439955,0.865554558968364,0.995261931078505,0.176915129006678,0,0,0,0,66.7271216508703,0,6.32514003458416,0,0,0,0,1.20990716048664,1.22429104652196,1.32691817219825,0.300646838828985,0.103688191397247,0,0,0,0,31.0224405172474,0,0,0,0,8.73633341210151,0,0.870806981601766,0.877071805034227,0.739039113478883,0,0,5.87549926029384,0,0,0.0633107959558787,6.06209286477889,4.80952921509202,1.06726497369676,8.79162282161373,0,0,0,0.288109595976299,0.124252535565433,0.235694034616795,0.135904206073614,0.523014231561666,0.611989305817931,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0.998395002494955,0,0,0,0,5.82479747637269,0.0787831823072236,0,0.0674035438541849,0,0,0.795229689809303,26.2872573795341,0,0,0,0,0,0.182248669974074,0,38.7724079912055,20.2999256082443,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,4.00777164720807,1.19009341568421,0,0,15.8045370600188,29.3972050536375,15.3268450478462,0,0,0,0.638341257770182,0,0,0,0,0.471162288750703,0,0.122026264901963,0,770.088549811766,234.947731155053,34.339310826585,34.7255073689939,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30617366729152,0.345430341731199,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0.318004350653419,0,0,0.352675943690684,0,2.24802287837608,1.41696576325585,0,0.41023272848151,0,0.345786262321089,0.807378228159255,0,0,0.707818340086442,0,0,0,0,82.550232178254,6.09203659628984,0.40341013740704,0,6.28576066755414,0.163771917510097,0.295712172434091,0.0675375846183947,0.781078098613847,0,0.317079050969534,11.4864709893826,1.64477330057155,0,0,0,13.9282477328355,4.03540466662589,2.42786241694653,3.41493287026946,1.68534503309014,0,0.514464028312255,0.40781839786099,0.0657727735628491,0.236387681767936,0,0.549451649953598,0.314231179832004,9.24898138935504,0,46.208504520785,0,23.0154472248833,0.158013611732727,0,0.173858272302579,0,0,0,0,0,0,0,0,9.164274741762,0.93061915699296,0.955538938977433,51.7890649223778,0.490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| ||
|short_description=p3@FOLR1 | |||
}} | }} |
Latest revision as of 00:45, 20 September 2015
Short description: | p3@FOLR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FOLR1_5end |
Coexpression cluster: | C160_medulla_Hepatocyte_retina_corpus_liver_pineal_cerebral |
Association with transcript: | 28bp_to_ENST00000393681_5end |
EntrezGene: | FOLR1 |
HGNC: | 3791 |
UniProt: | P15328 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.38e-13 | 10 |
nephron tubule epithelial cell | 1.38e-13 | 10 |
kidney cell | 2.84e-13 | 17 |
kidney epithelial cell | 2.84e-13 | 17 |
epithelial cell of nephron | 1.30e-12 | 15 |
kidney cortical cell | 8.91e-09 | 12 |
renal cortical epithelial cell | 8.91e-09 | 12 |
chorionic membrane mesenchymal stem cell | 5.54e-07 | 3 |