FFCP PHASE1:Hg19::chr11:72504638..72504680,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:72504638..72504680,- to FFCP PHASE1:Hg19::chr11:72504638..72504680,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=116985 | |EntrezGene=116985 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16925 | |HGNC=16925 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000359373_5end | |||
|cluster_id=chr11:72504638..72504680,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_5_at_ARAP1_5end | |||
|id=chr11:72504638..72504680,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000147;8.09e-09;14!CL:0000148;8.19e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000147,3.79e-09,14;CL:0000148,4.25e-07,10;CL:0000541,4.25e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.31e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.34e-23!94;UBERON:0001016!4.34e-23!94;UBERON:0005743!2.53e-21!86;UBERON:0001049!4.52e-20!57;UBERON:0005068!4.52e-20!57;UBERON:0006241!4.52e-20!57;UBERON:0007135!4.52e-20!57;UBERON:0001017!2.36e-19!82;UBERON:0002346!7.14e-19!90;UBERON:0000955!1.67e-18!69;UBERON:0006238!1.67e-18!69;UBERON:0003075!6.03e-18!86;UBERON:0007284!6.03e-18!86;UBERON:0002780!1.19e-17!41;UBERON:0001890!1.19e-17!41;UBERON:0006240!1.19e-17!41;UBERON:0003080!1.04e-16!42;UBERON:0003056!2.94e-16!61;UBERON:0002616!6.30e-16!59;UBERON:0001893!2.63e-15!34;UBERON:0002020!3.53e-15!34;UBERON:0003528!3.53e-15!34;UBERON:0002791!1.07e-14!33;UBERON:0001869!3.72e-14!32;UBERON:0007023!1.22e-13!115;UBERON:0001950!1.18e-12!20;UBERON:0002619!4.05e-12!22;UBERON:0000956!8.13e-12!25;UBERON:0000203!8.13e-12!25;UBERON:0000033!3.56e-09!123;UBERON:0000924!1.00e-08!173;UBERON:0006601!1.00e-08!173;UBERON:0000153!1.24e-08!129;UBERON:0007811!1.24e-08!129;UBERON:0004121!4.53e-08!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;5.20e-26;20!UBERON:0002619;9.30e-26;22!UBERON:0001893;2.11e-25;34!UBERON:0001869;5.89e-25;32!UBERON:0003528;6.24e-25;34!UBERON:0002020;6.24e-25;34!UBERON:0002791;6.38e-25;32!UBERON:0000956;6.07e-22;25!UBERON:0000203;6.07e-22;25!UBERON:0002780;6.62e-22;41!UBERON:0001890;6.62e-22;41!UBERON:0000073;6.14e-19;53!UBERON:0002616;6.14e-19;53!UBERON:0001017;1.22e-15;75!UBERON:0000955;1.58e-15;68!UBERON:0001016;1.11e-14;83!UBERON:0000125;9.40e-10;9!UBERON:0002308;9.40e-10;9!UBERON:0000200;1.94e-09;6!UBERON:0002021;9.28e-09;5!UBERON:0001872;4.59e-08;5!UBERON:0009663;1.63e-07;7!UBERON:0001871;1.90e-07;6!UBERON:0002420;2.45e-07;9!UBERON:0007245;2.45e-07;9!UBERON:0010009;2.45e-07;9!UBERON:0010011;2.45e-07;9!UBERON:0000454;2.45e-07;9!UBERON:0000966;3.87e-07;5!UBERON:0005388;3.87e-07;5!UBERON:0001802;3.87e-07;5!UBERON:0007023;7.65e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.75e-36,81;UBERON:0001016,2.82e-35,89;UBERON:0001049,8.06e-34,56;UBERON:0005068,8.06e-34,56;UBERON:0006241,8.06e-34,56;UBERON:0007135,8.06e-34,56;UBERON:0000955,1.16e-33,68;UBERON:0006238,1.16e-33,68;UBERON:0000073,9.30e-33,53;UBERON:0002616,9.30e-33,53;UBERON:0001893,1.08e-30,34;UBERON:0003528,2.03e-30,34;UBERON:0002020,2.03e-30,34;UBERON:0002780,6.12e-30,41;UBERON:0001890,6.12e-30,41;UBERON:0003080,6.12e-30,41;UBERON:0006240,6.12e-30,41;UBERON:0002346,1.05e-28,86;UBERON:0001869,3.17e-28,32;UBERON:0002791,3.25e-28,32;UBERON:0003075,4.21e-28,82;UBERON:0007284,4.21e-28,82;UBERON:0003056,8.65e-27,61;UBERON:0001950,2.36e-26,20;UBERON:0002619,3.68e-26,22;UBERON:0000956,2.72e-22,25;UBERON:0000203,2.72e-22,25;UBERON:0010371,2.09e-21,104;UBERON:0007023,4.51e-19,114;UBERON:0010314,1.38e-17,132;UBERON:0004121,2.89e-17,171;UBERON:0000924,2.89e-17,171;UBERON:0006601,2.89e-17,171;UBERON:0011216,8.58e-11,223;UBERON:0000200,1.48e-09,6;UBERON:0000125,1.56e-09,9;UBERON:0002308,1.56e-09,9;UBERON:0002021,8.92e-09,5;UBERON:0000966,2.78e-08,6;UBERON:0005388,2.78e-08,6;UBERON:0001802,2.78e-08,6;UBERON:0001872,3.46e-08,5;UBERON:0001871,1.35e-07,6;UBERON:0002420,2.13e-07,9;UBERON:0007245,2.13e-07,9;UBERON:0010009,2.13e-07,9;UBERON:0010011,2.13e-07,9;UBERON:0000454,2.13e-07,9;UBERON:0009663,2.23e-07,7 | |||
|phase1_expression=0.54503513781167,0,0.281908808191942,0,0.446961094427288,0,0,0,0,0.491467873003018,0,0,0,0.866364470720326,0.331397375727916,0.672325146451775,0,0,0.487932798790507,0.492484232307152,0.408001382488506,0.940364164434263,0.85870796139317,0.273748850145768,0.251085279189606,0.61130724598361,0.164201178899891,0.393553906568396,0.393364276848904,0,0,0,0,0,1.23947520928483,0.710846162437108,2.34880351467878,0,0,0.434021741431704,0.671746422719773,1.29557466407592,0.515151135268373,0.145398238779565,0,0,0,0.411167888021826,0.619412741790207,0,0.256160706529101,0,0.689491361473237,0,0,0.752969358170419,0,0.224723484445085,0.612167784741805,0,0,0,0,0,0,0,0.622822248995575,0.251248665256743,0.521482918420201,0.434377689410233,0,0.736555271975129,0,0,0.212604299965044,0,0.22465726229299,0,0,0.570025487482497,0,0,0,0.546138611262131,0.889509253863555,0.853460445133014,0,0.574752439954483,0,0,0,0.587237189370939,0.382273228125229,2.64342657158052,3.36305137788922,1.58030450865046,0,0,0.411202997999018,0,0.32592226663359,0.473447805734733,0,0.222820913770347,0.294605907474837,0,0.270803863765016,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0.236777252044017,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0.50133791063589,0.434539556882471,0,0.973269740605272,0.850813354476611,0,0.43917392846563,15.3245518332324,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,0,0,0.79504962946682,0,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0.258416759169329,0,0,0.402829317109147,0.760272105718513,0,0,0.81014194788176,0.267899184852239,0,0.225222960966644,0,1.89853131913626,0.549605231791222,0,0,0,0.993943903390637,0.379891534993739,0,0.860509862246441,0.354668382198357,1.12135520028461,0,0,0,0,0.326923806226917,0,0.576175924479999,0,0.312160076830321,0.570471821544449,0.298897361103602,0,0.161872944368132,0,0.204154171254893,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0,0.45071417671979,0,0.538168907066586,0.640672166455702,0.635795703478686,0.600182192168805,0.206105058476878,0,0.37223371266318,0.168776332241266,0.194874010322397,1.00973509697646,1.10459878370759,0.80823028409406,1.06502877754984,0.403008392910561,0.508681776931463,0,0,0,0,0.397589304964456,0,0.518305275076852,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0.110293972732394,0,0,0.269662616320329,0.196221465125346,0,0,1.40241773803446,0.8231480226628,0,0,0,0,0.441463099414651,0,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0.927443239800615,0.234817388471643,0.288732895522148,0.462985512576611,0.570762456703795,0,0,0.738651018262192,0,0.297262324577456,0,0,0,0,0,0,0.985326475791887,5.45900290882001,8.70778085271243,9.94427678577034,10.0993946741104,4.69884417762051,2.29193055334967,11.7217447210047,1.71072446022705,1.85089486865982,2.70308752059526,4.85904935471983,0.112131084345361,0,0.2933531432838,1.03417372606222,0,0.845302752556,0,0,0,0,0.532844358032199,0.285955987316295,0,0.823240336780769,0,0,0.791951872933429,0.301439377059586,0,0.099972991182057,2.43247561282381,0,0,0.718874566474748,0,0,0,0.410952645100767,0.179060963239896,0.112085143993527,0.394061520403854,0.215627574859517,0.128343036279748,1.27047312111232,1.30139853857622,0.773288812777695,1.17261385734044,0,0,0,0,0.49076596687656,1.00034104211935,0.271265023699736,0.831883446123229,0.356857977594324,0.473107245101804,0.234282829985426,0.902838299183157,4.5481500811197,1.03473071292505,0.664225598535437,0.737476674166813,0.347534457872331,1.56640925970192,1.37257369524342,0.206768026122887,0,0.106727557803444,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0.561320188866147,0.384417447767103,0,0,1.48418066444991,0.308419387605311,0,0,0,0.232420756919918,0.120859449591622,0,0,0.229628896329213,0.182091168006717,0.131124414959424,0,0.0770153371044148,0.784349769176855,0,0,0,0.680374821106063,0,0,0.541892875087706,0,0,0,0.447749509444357,0.657779629937804,0.261435451024901,1.28225062558195,1.64007322849853,2.27764876265012,0.309123034943167,0.0915694648183434,0.577566499444116,0,0,0,0.386682873168488,0.308097234229289,0.307007349452259,0.137836572484531,0.107420244868274,0.580066775656914,0.170453254832202,1.15741646340759,0,0,0,0,0,0,0,0,1.59691809095107,0.869932992075073,0.18532421910392,0.143124886741991,0,0,0,0.767693373934002,1.71175595213568,0.318203247925937,0,0.179872457583315,0.823611089208164,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,1.31178950409327,0,0.6196469961995,0,0.286822704408103,0.196498082026242,0,0.354761064070598,1.26664581178598,0,0.75894634753143,0.699869440489966,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0.854592569019785,0,0,0,0.432807638929335,0.0711418433484141,0,0.997896857164083,1.53204296105893,2.54008299268659,0,1.68478306868075,0.912938716132769,0.156679895773023,0,0.84645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| ||
|short_description=p5@ARAP1 | |||
}} | }} |
Latest revision as of 01:56, 20 September 2015
Short description: | p5@ARAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ARAP1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000359373_5end |
EntrezGene: | ARAP1 |
HGNC: | 16925 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 3.79e-09 | 14 |
melanocyte | 4.25e-07 | 10 |
melanoblast | 4.25e-07 | 10 |