FFCP PHASE1:Hg19::chr11:827941..827978,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=283229 | |EntrezGene=283229 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28703 | |HGNC=28703 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-251bp_to_uc001lrv.2_5end | |||
|cluster_id=chr11:827941..827978,+ | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_10_at_EFCAB4A_5end | |||
|id=chr11:827941..827978,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002521;2.59e-12;3!CL:0002327;1.12e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,2.59e-12,3;CL:0002327,1.12e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.84e-34;1!UBERON:0008801;3.05e-34;1 | |||
|ontology_enrichment_disease=DOID:3493!8.43e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.12e-09;4!DOID:1612;1.12e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.12e-09,4;DOID:1612,1.12e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0001829!2.02e-08!2;UBERON:0002294!7.05e-08!7;UBERON:0001173!7.05e-08!7;UBERON:0004912!7.05e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;3.05e-34;1!UBERON:0001567;3.05e-34;1!UBERON:0001044;4.86e-23;6!UBERON:0003293;4.86e-23;6!UBERON:0003294;4.86e-23;6!UBERON:0010047;4.86e-23;6!UBERON:0003408;4.86e-23;6!UBERON:0000167;4.86e-23;6!UBERON:0001829;7.05e-18;2!UBERON:0004089;7.05e-18;2!UBERON:0002190;2.59e-12;3!UBERON:0001041;1.72e-10;14!UBERON:0002365;3.38e-10;31!UBERON:0002330;3.38e-10;31!UBERON:0001911;1.12e-09;4!UBERON:0000161;5.54e-08;19!UBERON:0000166;5.54e-08;19!UBERON:0002072;6.55e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,3.61e-34,1;UBERON:0001567,3.61e-34,1;UBERON:0008801,3.61e-34,1;UBERON:0001044,4.86e-23,6;UBERON:0003293,4.86e-23,6;UBERON:0003294,4.86e-23,6;UBERON:0010047,4.86e-23,6;UBERON:0000167,4.86e-23,6;UBERON:0001829,7.67e-18,2;UBERON:0004089,7.67e-18,2;UBERON:0003408,2.84e-14,10;UBERON:0002190,2.59e-12,3;UBERON:0002365,2.08e-10,31;UBERON:0002330,2.08e-10,31;UBERON:0001911,1.12e-09,4;UBERON:0005333,1.12e-09,4;UBERON:0008425,1.12e-09,4;UBERON:0005311,1.12e-09,4;UBERON:0002072,6.55e-08,5;UBERON:0000166,5.09e-07,22 | |||
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| ||
|short_description=p10@EFCAB4A | |||
}} | }} |
Latest revision as of 18:30, 24 September 2015
Short description: | p10@EFCAB4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_EFCAB4A_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | -251bp_to_uc001lrv.2_5end |
EntrezGene: | EFCAB4A |
HGNC: | 28703 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 2.59e-12 | 3 |
mammary gland epithelial cell | 1.12e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
parotid gland | 3.61e-34 | 1 |
cheek | 3.61e-34 | 1 |
parotid gland primordium | 3.61e-34 | 1 |
saliva-secreting gland | 4.86e-23 | 6 |
gland of oral region | 4.86e-23 | 6 |
gland of foregut | 4.86e-23 | 6 |
oral gland | 4.86e-23 | 6 |
oral cavity | 4.86e-23 | 6 |
major salivary gland | 7.67e-18 | 2 |
midface | 7.67e-18 | 2 |
gland of gut | 2.84e-14 | 10 |
subcutaneous adipose tissue | 2.59e-12 | 3 |
exocrine gland | 2.08e-10 | 31 |
exocrine system | 2.08e-10 | 31 |
mammary gland | 1.12e-09 | 4 |
mammary bud | 1.12e-09 | 4 |
mammary ridge | 1.12e-09 | 4 |
mammary placode | 1.12e-09 | 4 |
hypodermis | 6.55e-08 | 5 |
oral opening | 5.09e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.12e-09 | 4 |
breast cancer | 1.12e-09 | 4 |