FFCP PHASE1:Hg19::chr11:86446800..86446842,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:86446800..86446842,- to FFCP PHASE1:Hg19::chr11:86446800..86446842,-: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:86446800..86446842,- | |||
|description=CAGE_peak_at_chr11:86446800..86446842,- | |||
|id=chr11:86446800..86446842,- | |||
|ontology_enrichment_celltype=CL:0000055!3.98e-25!180;CL:0000057!2.05e-20!75;CL:0000220!3.38e-12!246;CL:0002321!7.15e-12!248;CL:0000548!1.81e-11!679;CL:0000004!1.81e-11!679;CL:0000255!1.81e-11!679;CL:0000012!3.84e-11!682;CL:0000222!5.80e-10!119;CL:0000680!1.59e-08!57;CL:0000056!1.59e-08!57;CL:0000355!1.59e-08!57;CL:0000359!1.76e-08!32;CL:0000192!3.94e-08!42;CL:0000514!3.94e-08!42;CL:0002620!3.54e-07!23;CL:0000003!3.87e-07!722;CL:0000187!6.81e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000056;9.48e-12;4!CL:0000359;6.71e-10;32!CL:0000515;4.48e-09;3!CL:1000415;2.51e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,9.90e-12,4;CL:0000359,1.01e-09,32;CL:0000057,2.39e-09,76;CL:0000680,2.63e-08,58;CL:0000056,2.63e-08,58;CL:0000355,2.63e-08,58;CL:1000415,2.35e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000515;9.48e-12;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.64e-13!79;UBERON:0007798!2.64e-13!79;UBERON:0001637!4.89e-13!42;UBERON:0003509!4.89e-13!42;UBERON:0004572!4.89e-13!42;UBERON:0000914!2.07e-11!83;UBERON:0002329!2.07e-11!83;UBERON:0003077!2.07e-11!83;UBERON:0003059!2.07e-11!83;UBERON:0007282!2.07e-11!83;UBERON:0009618!2.07e-11!83;UBERON:0007285!2.07e-11!83;UBERON:0001981!1.70e-10!60;UBERON:0007500!1.70e-10!60;UBERON:0004537!1.70e-10!60;UBERON:0006965!1.70e-10!60;UBERON:0000055!8.95e-10!69;UBERON:0004535!9.39e-10!110;UBERON:0004872!2.58e-09!84;UBERON:0000490!2.71e-09!138;UBERON:0004573!3.92e-09!33;UBERON:0004571!3.92e-09!33;UBERON:0001009!4.34e-09!113;UBERON:0004290!2.04e-08!70;UBERON:0000486!4.01e-08!82;UBERON:0005256!1.46e-07!143;UBERON:0000947!2.34e-07!21;UBERON:0010191!2.34e-07!21;UBERON:0001134!2.38e-07!61;UBERON:0002036!2.38e-07!61;UBERON:0003082!2.38e-07!61;UBERON:0002385!7.86e-07!63;UBERON:0001015!7.86e-07!63;UBERON:0000383!7.86e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;8.16e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,4.11e-08,71;UBERON:0003059,4.11e-08,71;UBERON:0007282,4.11e-08,71;UBERON:0004290,4.11e-08,71;UBERON:0009618,4.11e-08,71;UBERON:0003077,6.08e-08,72;UBERON:0007285,6.08e-08,72;UBERON:0007524,8.89e-08,73;UBERON:0001134,1.54e-07,62;UBERON:0002036,1.54e-07,62;UBERON:0003082,1.54e-07,62;UBERON:0002385,3.43e-07,64;UBERON:0001015,3.43e-07,64;UBERON:0000383,3.43e-07,64;UBERON:0002049,4.68e-07,78;UBERON:0007798,4.68e-07,78;UBERON:0007503,5.08e-07,78;UBERON:0000488,6.31e-07,4 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0.672325146451775,3.61616716814386,1.46062018077475,0.487932798790507,0.369363174230364,0.408001382488506,0.313454721478088,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1686349143074,2.50668955317945,0.869079113764942,0,0.486634870302636,0.661743720148475,2.88248216701333,1.66886092816939,0,0,0,0,0,0,0,0,0,0.79504962946682,0.860234595106124,0,0,0.419499436209906,0.550236083880135,0.626984899610432,0,0,0,0.805658634218294,0,0.732186172644509,0.735326160691737,0,0,0,0,0,1.89853131913626,0.183201743930407,0,0,0,0.496971951695318,0.506522046658319,2.91300197789081,0.860509862246441,0.354668382198357,2.80338800071154,0,0.24666754841716,1.24484414159907,0.134710672069688,0.163461903113459,0.454072282934794,0,0.468642863667593,0.624320153660641,0,0.149448680551801,0.939475989150119,1.45685649931318,1.68540968042698,0.61246251376468,0.982674538494144,0.619954687054593,1.18800285728205,0.247266929278557,0,1.43723628363248,1.85169725349473,1.12606667884768,1.93944880838928,0,0.30648779579902,0,0.453728732640084,1.61450672119976,0.427114777637135,0,0,0,1.28820270022815,0.558350568994769,1.5189869901714,0,1.00973509697646,0.184099797284599,0.323292113637624,0.355009592516614,0.10075209822764,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0.928735856063958,4.33127689001751,0,0.168584690078102,0.723033089650446,0,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,1.20097467208968,0.109750285408626,0,0,0.185176890317059,0.325808305310325,2.07986957055916,0,0,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,1.87467667973554,1.17587489739202,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0.336393253036082,0.87192013766656,0.4400297149257,0.258543431515556,0,0,0,0,0.514414748524284,0,0,0,0,0,0,0.355391948742546,0.791951872933429,0,0.871533458600294,0.299918973546171,0,0,0,1.19812427745791,0,2.85273810081437,3.4747513600219,1.64381058040307,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03985430765404,1.42743191037729,1.89242898040722,0.35142424497814,0,0,0,0.664225598535437,0,0.260650843404249,0,0,0,0,0,0,0,0.30239029332968,0.744323423456331,0.153461973288062,0,0.384417447767103,1.02341449813341,0.64341568457443,1.48418066444991,0,0.355123450626254,0,0,0.232420756919918,0.120859449591622,0.601519410909855,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0.256450125116389,0.656029291399411,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.170453254832202,0.0890320356467374,0.991709492165869,0,3.1903178123646,0.10115778085555,0,1.25924938732256,0,0.616067160352178,1.06461206063404,0,0.55597265731176,2.28999818787186,1.116475108079,1.2655176988749,0,0.255897791311334,0,0,0,0,0,0.353437207037059,0.606547444719948,15.8510321173008,0,0.48763373908959,0.243713489631284,1.05650146756755,0.136499911407986,0.141405431953713,1.13008116620243,0,0,4.38450885253763,0,0,0.811641507850816,0,0.281695602532241,0,0.0982490410131212,1.426684205925,0,0,0.329294892959902,0,0.349934720244983,0.0962221127255121,0.670302275535787,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556543525114529,0,0,0.398495976502139,0,0,0.511343412510774,0,2.17727711363265,1.3480252672099,0.179021174675609,0,0,0,2.22273980289274,0,0,0,0,0,0,0.1137934482855,0.762760950878299,0,0,0,0,0,0,0,0,0,0,1.52513848926586,0.139423744278603,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0.627865836814451,0,0,1.8027707491708,0.347119476670262,0,0.261177619741208,0,1.0319161948297,0.19351266257817,0.0730893170861856,0.164230914106418,0,0,0,1.50746117111426,0,0,5.47543871657448,3.84762337207362,0,0,0,0,0,1.29649318189335,0.248505071130865,0.471388069233591,0.543616824294456,0.418411385249333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422401346077626,0.179287339332845,0.383830394638891,0,0,0,0,1.72844298240254,0.326587360109409,1.19730191562487,0,1.02232813071253,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499921631848426,0,0,14.5864808212866,0,0,0,0,0,0.189403005275089,0.50313580350515,0,0.686520205190771,0,0.15543720058278,0.443565449968902,0.159296767163702,0,0,1.24411862352257,0.53168342911599,0,0,0,0,0,0,0,0.398095888698616,1.20008329398946,0,0.336749488765919,3.78554694685953,1.92619830407303,0,0,0,0.463044948647668,0.244736704506468,2.14906609297785,0,0.219284049578707,0.706756583783524,9.83861595181665,5.40615810089832,0,0,0.607719912354764,0,0,0,0,0.655219697692825,19.4160597915438,0.211312123358627,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0.6124909547064,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0.80682027481408,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0.171488009437418,0,0,2.48207065856333,0.556157009460346,0,0.157115589916002,0,0,1.07963795609311,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.170426809518315,0,1.14553434272025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0.0802413666891683,0,0,0,0,0,0,0,0,0.462175628631418,1.73050624849516,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,2.4669009767735,0,0,0,0,0,0.358611026963382,0,0.162806537221949,0.213454691755431,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0.672325146451775,3.61616716814386,1.46062018077475,0.487932798790507,0.369363174230364,0.408001382488506,0.313454721478088,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1686349143074,2.50668955317945,0.869079113764942,0,0.486634870302636,0.661743720148475,2.88248216701333,1.66886092816939,0,0,0,0,0,0,0,0,0,0.79504962946682,0.860234595106124,0,0,0.419499436209906,0.550236083880135,0.626984899610432,0,0,0,0.805658634218294,0,0.732186172644509,0.735326160691737,0,0,0,0,0,1.89853131913626,0.183201743930407,0,0,0,0.496971951695318,0.506522046658319,2.91300197789081,0.860509862246441,0.354668382198357,2.80338800071154,0,0.24666754841716,1.24484414159907,0.134710672069688,0.163461903113459,0.454072282934794,0,0.468642863667593,0.624320153660641,0,0.149448680551801,0.939475989150119,1.45685649931318,1.68540968042698,0.61246251376468,0.982674538494144,0.619954687054593,1.18800285728205,0.247266929278557,0,1.43723628363248,1.85169725349473,1.12606667884768,1.93944880838928,0,0.30648779579902,0,0.453728732640084,1.61450672119976,0.427114777637135,0,0,0,1.28820270022815,0.558350568994769,1.5189869901714,0,1.00973509697646,0.184099797284599,0.323292113637624,0.355009592516614,0.10075209822764,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0.928735856063958,4.33127689001751,0,0.168584690078102,0.723033089650446,0,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,1.20097467208968,0.109750285408626,0,0,0.185176890317059,0.325808305310325,2.07986957055916,0,0,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,1.87467667973554,1.17587489739202,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0.336393253036082,0.87192013766656,0.4400297149257,0.258543431515556,0,0,0,0,0.514414748524284,0,0,0,0,0,0,0.355391948742546,0.791951872933429,0,0.871533458600294,0.299918973546171,0,0,0,1.19812427745791,0,2.85273810081437,3.4747513600219,1.64381058040307,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03985430765404,1.42743191037729,1.89242898040722,0.35142424497814,0,0,0,0.664225598535437,0,0.260650843404249,0,0,0,0,0,0,0,0.30239029332968,0.744323423456331,0.153461973288062,0,0.384417447767103,1.02341449813341,0.64341568457443,1.48418066444991,0,0.355123450626254,0,0,0.232420756919918,0.120859449591622,0.601519410909855,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0.256450125116389,0.656029291399411,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.170453254832202,0.0890320356467374,0.991709492165869,0,3.1903178123646,0.10115778085555,0,1.25924938732256,0,0.616067160352178,1.06461206063404,0,0.55597265731176,2.28999818787186,1.116475108079,1.2655176988749,0,0.255897791311334,0,0,0,0,0,0.353437207037059,0.606547444719948,15.8510321173008,0,0.48763373908959,0.243713489631284,1.05650146756755,0.136499911407986,0.141405431953713,1.13008116620243,0,0,4.38450885253763,0,0,0.811641507850816,0,0.281695602532241,0,0.0982490410131212,1.426684205925,0,0,0.329294892959902,0,0.349934720244983,0.0962221127255121,0.670302275535787,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556543525114529,0,0,0.398495976502139,0,0,0.511343412510774,0,2.17727711363265,1.3480252672099,0.179021174675609,0,0,0,2.22273980289274,0,0,0,0,0,0,0.1137934482855,0.762760950878299,0,0,0,0,0,0,0,0,0,0,1.52513848926586,0.139423744278603,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0.627865836814451,0,0,1.8027707491708,0.347119476670262,0,0.261177619741208,0,1.0319161948297,0.19351266257817,0.0730893170861856,0.164230914106418,0,0,0,1.50746117111426,0,0,5.47543871657448,3.84762337207362,0,0,0,0,0,1.29649318189335,0.248505071130865,0.471388069233591,0.543616824294456,0.418411385249333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422401346077626,0.179287339332845,0.383830394638891,0,0,0,0,1.72844298240254,0.326587360109409,1.19730191562487,0,1.02232813071253,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499921631848426,0,0,14.5864808212866,0,0,0,0,0,0.189403005275089,0.50313580350515,0,0.686520205190771,0,0.15543720058278,0.443565449968902,0.159296767163702,0,0,1.24411862352257,0.53168342911599,0,0,0,0,0,0,0,0.398095888698616,1.20008329398946,0,0.336749488765919,3.78554694685953,1.92619830407303,0,0,0,0.463044948647668,0.244736704506468,2.14906609297785,0,0.219284049578707,0.706756583783524,9.83861595181665,5.40615810089832,0,0,0.607719912354764,0,0,0,0,0.655219697692825,19.4160597915438,0.211312123358627,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0.6124909547064,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0.80682027481408,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0.171488009437418,0,0,2.48207065856333,0.556157009460346,0,0.157115589916002,0,0,1.07963795609311,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.170426809518315,0,1.14553434272025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0.0802413666891683,0,0,0,0,0,0,0,0,0.462175628631418,1.73050624849516,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,2.4669009767735,0,0,0,0,0,0.358611026963382,0,0.162806537221949,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:86446800..86446842,- | |||
}} | }} |
Latest revision as of 03:18, 24 July 2015
Short description: | p@chr11:86446800..86446842, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:86446800..86446842, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 9.90e-12 | 4 |
vascular associated smooth muscle cell | 1.01e-09 | 32 |
fibroblast | 2.39e-09 | 76 |
muscle precursor cell | 2.63e-08 | 58 |
myoblast | 2.63e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.63e-08 | 58 |
epithelial cell of gall bladder | 2.35e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
somite | 4.11e-08 | 71 |
presomitic mesoderm | 4.11e-08 | 71 |
presumptive segmental plate | 4.11e-08 | 71 |
dermomyotome | 4.11e-08 | 71 |
trunk paraxial mesoderm | 4.11e-08 | 71 |
paraxial mesoderm | 6.08e-08 | 72 |
presumptive paraxial mesoderm | 6.08e-08 | 72 |
dense mesenchyme tissue | 8.89e-08 | 73 |
skeletal muscle tissue | 1.54e-07 | 62 |
striated muscle tissue | 1.54e-07 | 62 |
myotome | 1.54e-07 | 62 |
muscle tissue | 3.43e-07 | 64 |
musculature | 3.43e-07 | 64 |
musculature of body | 3.43e-07 | 64 |
vasculature | 4.68e-07 | 78 |
vascular system | 4.68e-07 | 78 |
epithelial vesicle | 5.08e-07 | 78 |
atypical epithelium | 6.31e-07 | 4 |