FFCP PHASE1:Hg19::chr12:114843910..114843921,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:114843910..114843921,- to FFCP PHASE1:Hg19::chr12:114843910..114843921,-: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6910 | |EntrezGene=6910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11604 | |HGNC=11604 | ||
|TSSclassifier=strong | |||
|UniProt=Q99593 | |UniProt=Q99593 | ||
|association_with_transcript=-21bp_to_ENST00000405440,NM_181486,uc001tvo.2_5end | |||
|cluster_id=chr12:114843910..114843921,- | |||
|coexpression_cluster_id=C152 | |||
|description=CAGE_peak_6_at_TBX5_5end | |||
|id=chr12:114843910..114843921,- | |||
|ontology_enrichment_celltype=CL:0002620!1.05e-15!23;CL:0000057!3.52e-10!75;CL:0002580!1.91e-09!3;CL:0002600!5.19e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002574;6.82e-13;1!CL:0002620;2.44e-08;23!CL:0002600;4.42e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002574,6.06e-13,1;CL:0002620,2.21e-08,23;CL:0002600,4.69e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.95e-13;1!UBERON:0004140;6.82e-13;1 | |||
|ontology_enrichment_disease=DOID:17!2.09e-14!5;DOID:450!2.09e-14!5;DOID:66!2.09e-14!5;DOID:423!2.09e-14!5;DOID:0080000!2.09e-14!5;DOID:11722!2.09e-14!5 | |||
|ontology_enrichment_disease_v019=DOID:171;1.96e-11;10!DOID:17;3.42e-10;5!DOID:450;3.42e-10;5!DOID:66;3.42e-10;5!DOID:423;3.42e-10;5!DOID:0080000;3.42e-10;5!DOID:11722;3.42e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.07e-11,10;DOID:17,3.27e-10,5;DOID:450,3.27e-10,5;DOID:66,3.27e-10,5;DOID:423,3.27e-10,5;DOID:0080000,3.27e-10,5;DOID:11722,3.27e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.10e-12!27;UBERON:0000948!4.53e-10!24;UBERON:0005498!4.53e-10!24;UBERON:0004140!4.53e-10!24;UBERON:0009881!4.53e-10!24;UBERON:0004141!4.53e-10!24;UBERON:0003084!4.53e-10!24;UBERON:0007005!4.53e-10!24;UBERON:0004139!4.53e-10!24;UBERON:0004291!4.53e-10!24;UBERON:0000310!8.00e-10!10;UBERON:0000915!6.19e-09!52;UBERON:0001443!7.32e-09!11;UBERON:0003103!8.14e-09!69;UBERON:0002097!7.35e-08!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;2.95e-13;1!UBERON:0002171;2.95e-13;1!UBERON:0006518;2.95e-13;1!UBERON:0008949;2.95e-13;1!UBERON:0000101;2.95e-13;1!UBERON:0002167;2.95e-13;1!UBERON:0002346;4.37e-13;4!UBERON:0000923;4.37e-13;4!UBERON:0010316;4.37e-13;4!UBERON:0005291;4.37e-13;4!UBERON:0002135;6.82e-13;1!UBERON:0002050;1.18e-10;5!UBERON:0005423;1.18e-10;5!UBERON:0000948;1.04e-08;22!UBERON:0007100;1.10e-07;25!UBERON:0002081;2.91e-07;2!UBERON:0002133;4.42e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,2.32e-13,1;UBERON:0002171,2.95e-13,1;UBERON:0006518,2.95e-13,1;UBERON:0008949,2.95e-13,1;UBERON:0000101,2.95e-13,1;UBERON:0002167,2.95e-13,1;UBERON:0002135,8.64e-13,1;UBERON:0000948,5.54e-08,24;UBERON:0005498,5.54e-08,24;UBERON:0004140,5.54e-08,24;UBERON:0009881,5.54e-08,24;UBERON:0004141,5.54e-08,24;UBERON:0003084,5.54e-08,24;UBERON:0007005,5.54e-08,24;UBERON:0004139,5.54e-08,24;UBERON:0004291,5.54e-08,24;UBERON:0002081,2.58e-07,2;UBERON:0010227,2.58e-07,2;UBERON:0007100,4.08e-07,27;UBERON:0002133,4.98e-07,2 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0.269421344139376,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07633781413317,0.213557388818567,0.847727604638247,1.80054657650641,0.206105058476878,0,0,0.843881661206331,0.68205903612839,2.77677151668526,0.276149695926898,0,1.77504796258307,0.604512589365842,0.67824236924195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,1.39013783148933,0.195801157462741,0,0,0,0,0,0,0,0.744323423456331,1.2276957863045,0.280660094433074,0,0.511707249066704,0,0,0,0,0.246381468041427,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511795582622668,0.855877976067841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15755106853338,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0.687481272035051,0,0.199679000498991,0.858452096273142,0,1.67958681216816,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85878130549347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24253566392159,8.33182817028229,2.48543433208317,0,0,0,0,0.544017803369474,0.5013797880454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0.310874401165561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15649622793364,0,0,0,8.50299680406732,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,18.4664806577602,0,0,0,0,0,0.620916591138472,0,0,0,0,0,0,0.470958557103084,0,0,0,0,0,0.214429632529969,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356760272332706,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0.12729431655633,0,0,0,0,0.0717222053926763,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.363356758541113,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0.269421344139376,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07633781413317,0.213557388818567,0.847727604638247,1.80054657650641,0.206105058476878,0,0,0.843881661206331,0.68205903612839,2.77677151668526,0.276149695926898,0,1.77504796258307,0.604512589365842,0.67824236924195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,1.39013783148933,0.195801157462741,0,0,0,0,0,0,0,0.744323423456331,1.2276957863045,0.280660094433074,0,0.511707249066704,0,0,0,0,0.246381468041427,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511795582622668,0.855877976067841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15755106853338,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0.687481272035051,0,0.199679000498991,0.858452096273142,0,1.67958681216816,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85878130549347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24253566392159,8.33182817028229,2.48543433208317,0,0,0,0,0.544017803369474,0.5013797880454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0.310874401165561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15649622793364,0,0,0,8.50299680406732,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,18.4664806577602,0,0,0,0,0,0.620916591138472,0,0,0,0,0,0,0.470958557103084,0,0,0,0,0,0.214429632529969,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356760272332706,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0.12729431655633,0,0,0,0,0.0717222053926763,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@TBX5 | |||
}} | }} |
Latest revision as of 14:12, 16 September 2015
Short description: | p6@TBX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TBX5_5end |
Coexpression cluster: | C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung |
Association with transcript: | -21bp_to_ENST00000405440, NM_181486, uc001tvo.2_5end |
EntrezGene: | TBX5 |
HGNC: | 11604 |
UniProt: | Q99593 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stromal cell of pancreas | 6.06e-13 | 1 |
skin fibroblast | 2.21e-08 | 23 |
smooth muscle cell of trachea | 4.69e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 2.32e-13 | 1 |
lower lobe of right lung | 2.95e-13 | 1 |
right lung lobe | 2.95e-13 | 1 |
lower lobe of lung | 2.95e-13 | 1 |
lobe of lung | 2.95e-13 | 1 |
right lung | 2.95e-13 | 1 |
mitral valve | 8.64e-13 | 1 |
heart | 5.54e-08 | 24 |
primitive heart tube | 5.54e-08 | 24 |
primary heart field | 5.54e-08 | 24 |
anterior lateral plate mesoderm | 5.54e-08 | 24 |
heart tube | 5.54e-08 | 24 |
heart primordium | 5.54e-08 | 24 |
cardiac mesoderm | 5.54e-08 | 24 |
cardiogenic plate | 5.54e-08 | 24 |
heart rudiment | 5.54e-08 | 24 |
cardiac atrium | 2.58e-07 | 2 |
future cardiac atrium | 2.58e-07 | 2 |
primary circulatory organ | 4.08e-07 | 27 |
atrioventricular valve | 4.98e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.07e-11 | 10 |
musculoskeletal system disease | 3.27e-10 | 5 |
myotonic disease | 3.27e-10 | 5 |
muscle tissue disease | 3.27e-10 | 5 |
myopathy | 3.27e-10 | 5 |
muscular disease | 3.27e-10 | 5 |
myotonic dystrophy | 3.27e-10 | 5 |