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FFCP PHASE1:Hg19::chr12:13105091..13105109,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr12:13105091..13105109,-
|DHSsupport=supported 
|short_description=p1@GPRC5D
|DPIdataset=robust
|description=CAGE_peak_1_at_GPRC5D_5end
|association_with_transcript=-10bp_to_ENST00000541128_5end
|EntrezGene=55507
|EntrezGene=55507
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=13310
|HGNC=13310
|TSSclassifier=strong
|UniProt=F5GWX9
|UniProt=F5GWX9
|association_with_transcript=-10bp_to_ENST00000541128_5end
|cluster_id=chr12:13105091..13105109,-
|coexpression_cluster_id=C146
|description=CAGE_peak_1_at_GPRC5D_5end
|id=chr12:13105091..13105109,-
|ontology_enrichment_celltype=CL:0000236!5.81e-19!14;CL:0000945!9.12e-13!24;CL:0000826!9.12e-13!24;CL:0002536!4.78e-07!2
|ontology_enrichment_celltype_v019=CL:0000236;1.83e-58;13!CL:0000945;1.48e-38;24!CL:0000542;2.10e-12;53
|ontology_enrichment_celltype_v019_2=CL:0000236,3.80e-54,14;CL:0000945,1.60e-38,24;CL:0000826,1.60e-38,24;CL:0000838,4.98e-17,52;CL:0000542,1.11e-16,53;CL:0000051,1.11e-16,53;CL:0002087,8.10e-07,115
|ontology_enrichment_development_v019=CL:0000051;2.10e-12;53!UBERON:0006298;1.21e-10;1
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=DOID:4960;3.95e-11;1!DOID:0070004;3.95e-11;1
|ontology_enrichment_disease_v019_2=DOID:4960,3.76e-11,1;DOID:0070004,3.76e-11,1
|ontology_enrichment_uberon=UBERON:0007023!2.55e-17!115;UBERON:0000178!3.54e-16!15;UBERON:0000179!3.54e-16!15;UBERON:0000463!3.54e-16!15;UBERON:0001044!5.46e-09!6;UBERON:0003293!5.46e-09!6;UBERON:0003294!5.46e-09!6;UBERON:0010047!5.46e-09!6;UBERON:0000167!5.46e-09!6;UBERON:0001829!1.05e-07!2;UBERON:0000305!1.85e-07!7;UBERON:0003127!2.98e-07!2
|ontology_enrichment_uberon_v019=UBERON:0000178;1.83e-15;15!UBERON:0000179;1.83e-15;15!UBERON:0000463;1.83e-15;15!UBERON:0007029;2.79e-11;1!UBERON:0001736;1.21e-10;1!UBERON:0002390;1.30e-09;32!UBERON:0001044;4.04e-07;6!UBERON:0003293;4.04e-07;6!UBERON:0003294;4.04e-07;6!UBERON:0010047;4.04e-07;6!UBERON:0003408;4.04e-07;6!UBERON:0000167;4.04e-07;6
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.95e-15,15;UBERON:0000179,1.95e-15,15;UBERON:0000463,1.95e-15,15;UBERON:0007029,2.79e-11,1;UBERON:0001736,1.33e-10,1;UBERON:0006298,1.33e-10,1;UBERON:0001044,3.80e-07,6;UBERON:0003293,3.80e-07,6;UBERON:0003294,3.80e-07,6;UBERON:0010047,3.80e-07,6;UBERON:0000167,3.80e-07,6
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|short_description=p1@GPRC5D
}}
}}

Latest revision as of 08:50, 17 September 2015

Short description:p1@GPRC5D
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_GPRC5D_5end
Coexpression cluster:C146_lymphangiectasia_lymphoma_gall_lymph_tonsil_gastric_transitionalcell
Association with transcript: -10bp_to_ENST00000541128_5end
EntrezGene:GPRC5D
HGNC: 13310
UniProt: F5GWX9
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data