FFCP PHASE1:Hg19::chr12:14720824..14720850,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:14720824..14720850,- to FFCP PHASE1:Hg19::chr12:14720824..14720850,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79887 | |EntrezGene=79887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26215 | |HGNC=26215 | ||
|TSSclassifier=strong | |||
|UniProt=Q6P4A8 | |UniProt=Q6P4A8 | ||
|association_with_transcript=-33bp_to_NM_024829,uc001rcc.1_5end | |||
|cluster_id=chr12:14720824..14720850,- | |||
|description=CAGE_peak_2_at_PLBD1_5end | |||
|id=chr12:14720824..14720850,- | |||
|ontology_enrichment_celltype=CL:0000766!9.92e-20!76;CL:0002057!1.73e-19!42;CL:0002009!1.21e-18!65;CL:0002194!1.47e-18!63;CL:0000576!1.47e-18!63;CL:0000040!1.47e-18!63;CL:0000559!1.47e-18!63;CL:0000860!1.04e-16!45;CL:0000557!3.24e-15!71;CL:0000839!1.68e-14!70;CL:0000763!1.36e-09!112;CL:0000049!1.36e-09!112 | |||
|ontology_enrichment_celltype_v019=CL:0000473;5.14e-21;39!CL:0000234;5.14e-21;39!CL:0000860;3.21e-20;33!CL:0002057;3.21e-20;33!CL:0000576;4.04e-16;48!CL:0000766;2.23e-12;69!CL:0000094;1.09e-07;8!CL:0000039;1.21e-07;7!CL:0000586;1.21e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.68e-30,72;CL:0000473,1.58e-27,48;CL:0000234,1.58e-27,48;CL:0002194,1.82e-27,59;CL:0000576,1.82e-27,59;CL:0000040,1.82e-27,59;CL:0000559,1.82e-27,59;CL:0002009,5.95e-26,61;CL:0000860,1.23e-23,42;CL:0002057,1.23e-23,42;CL:0000839,1.37e-22,66;CL:0000557,5.54e-22,67;CL:0000763,1.43e-17,108;CL:0000049,1.43e-17,108;CL:0000738,4.54e-11,136;CL:0002087,1.05e-08,115;CL:0000039,8.50e-08,7;CL:0000586,8.50e-08,7;CL:0000094,8.54e-08,8;CL:0000037,9.53e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;9.05e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.25e-14!102;UBERON:0003061!1.25e-14!102;UBERON:0002371!8.20e-13!80;UBERON:0002193!7.83e-12!112;UBERON:0001474!9.59e-12!86;UBERON:0004765!9.18e-11!101;UBERON:0001434!9.18e-11!101;UBERON:0005409!2.46e-10!35;UBERON:0007023!3.65e-10!115;UBERON:0000160!2.61e-09!27;UBERON:0000926!2.73e-09!448;UBERON:0004120!2.73e-09!448;UBERON:0006603!2.73e-09!448;UBERON:0000062!1.29e-08!511;UBERON:0000922!4.00e-08!612;UBERON:0002405!3.58e-07!115;UBERON:0002108!5.03e-07!14;UBERON:0000468!5.82e-07!659;UBERON:0002075!6.72e-07!18;UBERON:0002323!6.93e-07!46;UBERON:0002050!7.10e-07!605;UBERON:0005423!7.10e-07!605;UBERON:0004458!8.74e-07!49 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;3.20e-09;22!UBERON:0001264;1.65e-07;10!UBERON:0000160;2.38e-07;17!UBERON:0002075;2.97e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.51e-20,98;UBERON:0003061,2.51e-20,98;UBERON:0002371,5.45e-18,76;UBERON:0002193,2.70e-17,108;UBERON:0001474,2.77e-17,82;UBERON:0004765,8.95e-15,90;UBERON:0002405,1.03e-13,93;UBERON:0001434,1.03e-12,100;UBERON:0005409,1.35e-09,25;UBERON:0000160,1.60e-07,17;UBERON:0001264,2.04e-07,10;UBERON:0002075,2.20e-07,18;UBERON:0002204,2.49e-07,167 | |||
|phase1_expression=0.363356758541113,0,0.422863212287913,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0.261185628199839,0.491467873003018,0,0,0,0,0.331397375727916,0,0,0,0,0.61560529038394,0,0.313454721478088,1.14494394852423,0.273748850145768,0.502170558379211,0,0,0,5.11373559903575,2.68680578668049,6.65709330259127,0,0,0,0,0,0,7.75593571944628,4.8130667392834,4.77423915574874,10.7479427635164,6.80176698639857,7.7272670290256,3.34415949192999,4.53451132426571,2.18325655069035,2.55671940596253,1.6446715520873,2.78735733805593,6.90461741573161,5.37937483711111,4.49316236788312,5.17118521104928,7.10033151942209,5.41705946377367,3.20011977222428,1.36453075028923,2.24723484445085,1.83650335422542,3.20929027076094,1.91801137739712,4.94776950280074,4.3882004676759,2.55734850319616,2.61188314765726,1.13477044938228,0.622822248995575,4.52247597462138,7.82224377630302,4.12658804939722,6.65939452896706,2.94622108790052,3.16462387440884,2.5350634357433,2.33864729961548,1.88692780957538,5.39177429503177,5.55654503513573,7.07192581467153,0.855038231223746,0.19891667719909,0.365328307529268,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0,0,0,0,4.02420515822182,1.15076305659177,0.361439152384566,0,1.59331170856906,1.5905718941022,0.486634870302636,1.03988298880475,0,1.31752178539689,0.982343066232845,0,0,2.59637914923747,4.35324343248168,5.05240249971688,0,0.571994910780128,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.225222960966644,0,0,0.183201743930407,1.31780417436063,19.3890132074163,0,0,0,0,0.286836620748814,0.354668382198357,0.560677600142307,0,0,2.17847724779836,0.134710672069688,0.163461903113459,0.302714855289863,0,0.937285727335186,0.624320153660641,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0.494533858557114,0,0,0.336672227908132,0.500474079487857,0,0.438977620880838,0.919463387397059,1.05166641234618,0.340296549480063,0,0,0,0.300091096084402,0,0,0.18611685633159,0,0.194874010322397,0,0,0.161646056818812,0,0,0.169560592310488,0.57978255948989,0,0.286804595389004,1.70763188581434,0.530119073285941,2.5562667431294,1.45125477021519,0.756962552626885,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0,0.236613600079688,0.168584690078102,0,0.330881918197182,0.217879444092406,0,0.674156540800822,0,0,0,0,2.057870056657,0,0,0,0,0,1.72183813960359,0.686271241194102,0,0,0.301586917234893,0,0,0,2.88662684050547,1.62302566965108,0.469634776943287,0,0,0,0,0,12.5570673104573,10.7641961964049,10.7014436847884,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.336393253036082,0.87192013766656,0.4400297149257,0.129271715757778,0,0,2.6593811658487,0,0.771622122786426,0,0.532844358032199,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,6.08118903205952,7.5338563714819,0,0,0,0,0.434343920002738,0.61642896765115,0.358121926479791,0,0.197030760201927,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0.335032530668698,0,3.74503511973591,8.97484377612075,4.97298616123243,0.12269149171914,1.00034104211935,0.813795071099207,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0.587403472388222,0.343143423810856,2.27444828735176,1.94142780736755,1.70764092485511,0,0,0,0.496215615637554,0,0.561320188866147,0.768834895534206,0,0,0,0.308419387605311,0.532685175939381,0.246381468041427,0,0.116210378459959,1.45031339509947,0,0.0920809889358963,0.34444334449382,0,0.393373244878272,1.35359883872224,0.462092022626489,0.784349769176855,0,0.73886140225013,0,0.680374821106063,0,0,1.08378575017541,0,2.03901018436031,0.831076008928724,1.34324852833307,0,0,0.256450125116389,0.656029291399411,2.27764876265012,2.16386124460217,0,0,0,0,0,0.290012154876366,1.23238893691716,2.14905144616581,1.7918754422989,1.28904293841928,1.30515024522806,1.70453254832202,0.979352392114111,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0.744316738719335,0,0.38126038784765,0.255897791311334,0,0,0,1.07923474549989,1.37268514868027,1.06031162111118,0.202182481573316,0,0,0.975267478179181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0,0,0,1.47775344708365,0.658589785919804,0,0.349934720244983,0,0,0,2.44773882019626,0,0,0,0,2.02979043692868,3.0585488285695,3.41788312304498,0.952927101831156,2.46817363851717,3.8908398671563,2.16012574895246,2.37937552888281,0,0,2.20536194382929,2.04383492638291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0.447352215784832,0.333698283423817,0,0,0,0,0,0,4.6785135102055,3.36968812325356,6.79618921797275,0,2.27308917445131,0.71623345421307,0.890894042497916,0.307160702099232,0,0.281338832821026,0,0,0,0.996239941255349,1.38141957765574,0.251932747854276,0,0,0,1.16828856491525,0,0,1.97286811273867,4.7896618469388,0,0,0.0927680981618513,0,1.30213880542617,0,7.24999575434793,0.910347586283997,0,0.236387681767936,0,0,0.69449997973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| ||
|short_description=p2@PLBD1 | |||
}} | }} |
Latest revision as of 13:24, 17 September 2015
Short description: | p2@PLBD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PLBD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -33bp_to_NM_024829, uc001rcc.1_5end |
EntrezGene: | PLBD1 |
HGNC: | 26215 |
UniProt: | Q6P4A8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.68e-30 | 72 |
defensive cell | 1.58e-27 | 48 |
phagocyte | 1.58e-27 | 48 |
monopoietic cell | 1.82e-27 | 59 |
monocyte | 1.82e-27 | 59 |
monoblast | 1.82e-27 | 59 |
promonocyte | 1.82e-27 | 59 |
macrophage dendritic cell progenitor | 5.95e-26 | 61 |
classical monocyte | 1.23e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.23e-23 | 42 |
myeloid lineage restricted progenitor cell | 1.37e-22 | 66 |
granulocyte monocyte progenitor cell | 5.54e-22 | 67 |
myeloid cell | 1.43e-17 | 108 |
common myeloid progenitor | 1.43e-17 | 108 |
leukocyte | 4.54e-11 | 136 |
nongranular leukocyte | 1.05e-08 | 115 |
germ line cell | 8.50e-08 | 7 |
germ cell | 8.50e-08 | 7 |
granulocyte | 8.54e-08 | 8 |
hematopoietic stem cell | 9.53e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.51e-20 | 98 |
blood island | 2.51e-20 | 98 |
bone marrow | 5.45e-18 | 76 |
hemolymphoid system | 2.70e-17 | 108 |
bone element | 2.77e-17 | 82 |
skeletal element | 8.95e-15 | 90 |
immune system | 1.03e-13 | 93 |
skeletal system | 1.03e-12 | 100 |
gastrointestinal system | 1.35e-09 | 25 |
intestine | 1.60e-07 | 17 |
pancreas | 2.04e-07 | 10 |
viscus | 2.20e-07 | 18 |
musculoskeletal system | 2.49e-07 | 167 |