FFCP PHASE1:Hg19::chr12:15035012..15035043,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:15035012..15035043,- to FFCP PHASE1:Hg19::chr12:15035012..15035043,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:15035012..15035043,- | |||
|coexpression_cluster_id=C491 | |||
|description=CAGE_peak_at_chr12:15035012..15035043,- | |||
|id=chr12:15035012..15035043,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.98e-11;13!CL:0002615;7.88e-11;3!CL:0002579;1.97e-09;3!CL:0002617;1.69e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,7.91e-11,3;CL:0000136,9.55e-10,15;CL:0002579,2.04e-09,3;CL:0002617,1.72e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006603;3.07e-08;65!UBERON:0005062;1.35e-07;4!UBERON:0007284;1.35e-07;4!UBERON:0007297;1.49e-07;2!UBERON:0006965;2.69e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.02e-23!115;UBERON:0007100!1.23e-13!27;UBERON:0000948!2.35e-11!24;UBERON:0005498!2.35e-11!24;UBERON:0004140!2.35e-11!24;UBERON:0009881!2.35e-11!24;UBERON:0004141!2.35e-11!24;UBERON:0003084!2.35e-11!24;UBERON:0007005!2.35e-11!24;UBERON:0004139!2.35e-11!24;UBERON:0004291!2.35e-11!24;UBERON:0003103!1.10e-09!69;UBERON:0003688!3.32e-09!6;UBERON:0002358!3.32e-09!6;UBERON:0003684!3.32e-09!6;UBERON:0001178!3.32e-09!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.62e-18;6!UBERON:0002358;1.62e-18;6!UBERON:0003684;1.62e-18;6!UBERON:0001178;1.62e-18;6!UBERON:0004457;4.41e-12;9!UBERON:0000042;4.41e-12;9!UBERON:0006947;2.21e-10;3!UBERON:0004054;2.21e-10;3!UBERON:0007100;3.56e-10;25!UBERON:0003978;5.19e-10;3!UBERON:0004151;5.19e-10;3!UBERON:0000946;5.19e-10;3!UBERON:0000948;1.09e-09;22!UBERON:0005904;7.22e-08;4!UBERON:0005406;1.22e-07;2!UBERON:0002081;2.27e-07;2!UBERON:0002133;2.27e-07;2!UBERON:0003135;4.00e-07;11!UBERON:0000341;6.18e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.67e-22,114;UBERON:0003688,1.68e-18,6;UBERON:0002358,1.68e-18,6;UBERON:0003684,1.68e-18,6;UBERON:0001178,1.68e-18,6;UBERON:0004797,2.00e-10,7;UBERON:0006947,2.15e-10,3;UBERON:0004054,2.15e-10,3;UBERON:0003978,4.47e-10,3;UBERON:0009751,4.47e-10,3;UBERON:0000946,4.47e-10,3;UBERON:0002523,4.47e-10,3;UBERON:0005983,4.47e-10,3;UBERON:0002165,4.47e-10,3;UBERON:0002062,4.47e-10,3;UBERON:0007280,4.47e-10,3;UBERON:0004151,4.61e-10,3;UBERON:0007100,2.93e-09,27;UBERON:0004457,7.44e-09,12;UBERON:0000042,7.44e-09,12;UBERON:0000948,9.48e-09,24;UBERON:0005498,9.48e-09,24;UBERON:0004140,9.48e-09,24;UBERON:0009881,9.48e-09,24;UBERON:0004141,9.48e-09,24;UBERON:0003084,9.48e-09,24;UBERON:0007005,9.48e-09,24;UBERON:0004139,9.48e-09,24;UBERON:0004291,9.48e-09,24;UBERON:0003103,1.36e-08,68;UBERON:0005904,7.08e-08,4;UBERON:0005406,1.22e-07,2;UBERON:0002081,2.21e-07,2;UBERON:0010227,2.21e-07,2;UBERON:0002133,2.28e-07,2;UBERON:0003135,3.96e-07,11;UBERON:0000341,4.87e-07,2 | |||
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|phase1_expression=12.717486548939,5.35251309727458,29.459470456058,42.0307853083148,103.694973907131,65.4253893075277,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,7.31420598941885,1.34140171940727,0.895037932904712,0.722878304769133,0.50133791063589,0.144846518960824,0,0.973269740605272,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0,1.72101972449288,1.06400514659507,0,0,0.24666754841716,4.04574346019696,0.538842688278752,3.59616186849609,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680593098960126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.469634776943287,0.144366447761074,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0,0,0.623912584592421,0.178428988797162,0,0.35142424497814,0.601892199455438,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,1.53766979106841,3.07024349440022,2.0911009748669,7.42090332224955,0,0,0,0,0,0,0,0,0,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0,0,0,0.42793898803392,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.545999645631943,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0,0,0,3.1668811219199,17.5338229660941,2.76283915531148,0,0,0,0,0,0,0,2.26879832964947,0,0,0,0.0927680981618513,0,0,0.174919999992391,7.97499532978273,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0.658156191461918,0,0,3.61666214967846,0,0,0,0,0.31900115973192,0.915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,1.50377859655677,1.83309043480088,0.296521128680622,0,0,0,0.802577647298789,0,0,0,0,4.73501283419269,1.20990716048664,0,3.22251556105289,0,0,0,0,0,0,0,0.277349346026277,0,0,0,21.1419268572856,0,0,0,0,1.35784623083787,0,2.48578814858586,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0,9.21631924198439,2.97908551215189,3.58936512288407,0.399358000997982,1.28767814440971,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472834243795189,0.104909176269996,0,0,0,9.29103924285377,2.64836788146173,0,1.08599920350743,0,0.326587360109409,0,0,0,0.113312091520126,0.58620893471233,0,0,0,0,0,1.28144895081234,0.943225830597996,17.8122793799294,0.496166021811951,0,0,0,0.544017803369474,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0.332787154610557,0,0.138348634936231,0,0,0,0,0.468334905806882,0,0.149254802886874,0,0,0,0,0,0,0,0.310874401165561,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0.705351887381368,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0.397832444232549,1.20336525358812,0,0.781514011233092,0,0,0,0,0,0,0,0,1.64477330057155,6.94695649745012,0.175871244359621,0,0.535701835878287,0,0,0.227662191351298,0.0887023701626388,0,2.05785611324902,0,0,0,0,1.41287567130925,0,0,0,0,0,0.643288897589907,0,1.51113852978563,0,0.801711364730253,0,0.6828739083758,0.691259661814092,0.860454717640555,0,0,5.92741870267301,0.22910686854405,0,0,0,0,0,0.647428837187895,0.205325613712494,1.1598144313382,1.94284397223656,0,0,0,0,0,0,0.617393264863557,0.218559560503957,0,4.16752146981639,0,1.57046773691956,0,1.6906229103336,0,0.187967835959707,0.0644578879735772,0,0,0,0,1.46067277649303,1.37618785021362,0,0,0,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,13.3370508864101,0,0,0,2.98527574661373,2.61870874610114,0,0.0620747142958579,0,1.46388464039779,2.42540626749863,1.74173398317569,0.684466602170562,0,0.358611026963382,4.9899053481902,0,0,0,0,2.34640942403454,0.855690109280065,0.813792356631477,0.665756774185513,2.21401172950129,0 | ||
|short_description=p@chr12:15035012..15035043,- | |||
}} | }} |
Latest revision as of 07:06, 24 July 2015
Short description: | p@chr12:15035012..15035043, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:15035012..15035043, - |
Coexpression cluster: | C491_Adipocyte_dura_aorta_Preadipocyte_heart_Fibroblast_epididymis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 7.91e-11 | 3 |
fat cell | 9.55e-10 | 15 |
omentum preadipocyte | 2.04e-09 | 3 |
adipocyte of breast | 1.72e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.67e-22 | 114 |
omentum | 1.68e-18 | 6 |
peritoneum | 1.68e-18 | 6 |
abdominal cavity | 1.68e-18 | 6 |
visceral peritoneum | 1.68e-18 | 6 |
blood vessel layer | 2.00e-10 | 7 |
male genital duct | 2.15e-10 | 3 |
internal male genitalia | 2.15e-10 | 3 |
valve | 4.47e-10 | 3 |
cardiac mesenchyme | 4.47e-10 | 3 |
cardial valve | 4.47e-10 | 3 |
tunica intima | 4.47e-10 | 3 |
heart layer | 4.47e-10 | 3 |
endocardium | 4.47e-10 | 3 |
endocardial cushion | 4.47e-10 | 3 |
presumptive endocardium | 4.47e-10 | 3 |
cardiac chamber | 4.61e-10 | 3 |
primary circulatory organ | 2.93e-09 | 27 |
cavity lining | 7.44e-09 | 12 |
serous membrane | 7.44e-09 | 12 |
heart | 9.48e-09 | 24 |
primitive heart tube | 9.48e-09 | 24 |
primary heart field | 9.48e-09 | 24 |
anterior lateral plate mesoderm | 9.48e-09 | 24 |
heart tube | 9.48e-09 | 24 |
heart primordium | 9.48e-09 | 24 |
cardiac mesoderm | 9.48e-09 | 24 |
cardiogenic plate | 9.48e-09 | 24 |
heart rudiment | 9.48e-09 | 24 |
compound organ | 1.36e-08 | 68 |
duct of male reproductive system | 7.08e-08 | 4 |
perirenal fat | 1.22e-07 | 2 |
cardiac atrium | 2.21e-07 | 2 |
future cardiac atrium | 2.21e-07 | 2 |
atrioventricular valve | 2.28e-07 | 2 |
male reproductive organ | 3.96e-07 | 11 |
throat | 4.87e-07 | 2 |