FFCP PHASE1:Hg19::chr12:16758835..16758863,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:16758835..16758863,- to FFCP PHASE1:Hg19::chr12:16758835..16758863,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55885 | |EntrezGene=55885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6643 | |HGNC=6643 | ||
|TSSclassifier=strong | |||
|UniProt=Q05D86,B4DG90 | |UniProt=Q05D86,B4DG90 | ||
|association_with_transcript=0bp_to_ENST00000539232,ENST00000541295_5end | |||
|cluster_id=chr12:16758835..16758863,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_16_at_LMO3_5end | |||
|id=chr12:16758835..16758863,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;8.21e-17;2!UBERON:0006601;1.20e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.72e-60!57;UBERON:0005068!8.72e-60!57;UBERON:0006241!8.72e-60!57;UBERON:0007135!8.72e-60!57;UBERON:0001893!3.65e-57!34;UBERON:0002780!4.11e-57!41;UBERON:0001890!4.11e-57!41;UBERON:0006240!4.11e-57!41;UBERON:0003080!1.44e-55!42;UBERON:0002791!1.27e-54!33;UBERON:0007023!6.02e-54!115;UBERON:0002020!8.32e-53!34;UBERON:0003528!8.32e-53!34;UBERON:0001869!9.81e-53!32;UBERON:0002616!2.94e-51!59;UBERON:0000955!3.49e-47!69;UBERON:0006238!3.49e-47!69;UBERON:0001017!2.70e-45!82;UBERON:0002619!3.87e-45!22;UBERON:0005743!1.06e-42!86;UBERON:0003075!8.00e-41!86;UBERON:0007284!8.00e-41!86;UBERON:0002346!9.79e-41!90;UBERON:0001950!6.20e-40!20;UBERON:0000073!1.06e-39!94;UBERON:0001016!1.06e-39!94;UBERON:0000956!3.08e-39!25;UBERON:0000203!3.08e-39!25;UBERON:0003056!1.08e-35!61;UBERON:0000033!1.10e-23!123;UBERON:0000153!2.05e-23!129;UBERON:0007811!2.05e-23!129;UBERON:0002420!8.10e-20!9;UBERON:0007245!8.10e-20!9;UBERON:0010009!8.10e-20!9;UBERON:0010011!8.10e-20!9;UBERON:0000454!8.10e-20!9;UBERON:0000924!6.20e-19!173;UBERON:0006601!6.20e-19!173;UBERON:0004121!1.70e-18!169;UBERON:0001871!3.84e-17!7;UBERON:0000200!4.02e-17!6;UBERON:0000349!3.37e-15!5;UBERON:0000025!8.62e-15!194;UBERON:0002308!9.76e-15!9;UBERON:0000125!9.76e-15!9;UBERON:0009663!1.83e-14!7;UBERON:0004111!7.65e-13!241;UBERON:0000369!1.19e-12!4;UBERON:0002435!1.19e-12!4;UBERON:0000204!1.19e-12!4;UBERON:0010082!1.19e-12!4;UBERON:0000477!9.33e-12!286;UBERON:0000483!5.85e-10!309;UBERON:0005383!6.77e-10!3;UBERON:0005382!6.77e-10!3;UBERON:0000119!9.53e-10!312;UBERON:0002771!1.37e-09!3;UBERON:0000064!1.59e-09!219;UBERON:0001872!1.67e-09!5;UBERON:0000475!2.08e-09!365;UBERON:0002021!5.39e-09!5;UBERON:0000481!1.65e-08!347;UBERON:0002298!6.95e-08!8;UBERON:0003076!1.68e-07!15;UBERON:0003057!1.68e-07!15;UBERON:0001876!3.46e-07!2;UBERON:0001873!4.23e-07!2;UBERON:0010122!4.23e-07!2;UBERON:0001954!6.31e-07!2;UBERON:0003022!6.31e-07!2;UBERON:0002421!6.31e-07!2;UBERON:0002600!6.31e-07!2;UBERON:0000923!8.26e-07!604;UBERON:0005291!8.26e-07!604;UBERON:0006598!8.26e-07!604;UBERON:0002532!8.26e-07!604;UBERON:0001870!8.84e-07!2;UBERON:0002050!9.02e-07!605;UBERON:0005423!9.02e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.89e-87;32!UBERON:0002619;4.15e-82;22!UBERON:0001893;6.40e-82;34!UBERON:0002791;3.22e-80;32!UBERON:0003528;6.94e-75;34!UBERON:0002020;6.94e-75;34!UBERON:0000956;2.55e-72;25!UBERON:0000203;2.55e-72;25!UBERON:0001950;1.18e-68;20!UBERON:0002780;1.04e-53;41!UBERON:0001890;1.04e-53;41!UBERON:0000349;1.38e-39;5!UBERON:0000073;1.85e-34;53!UBERON:0002616;1.85e-34;53!UBERON:0000369;2.97e-32;4!UBERON:0002435;2.97e-32;4!UBERON:0000204;2.97e-32;4!UBERON:0002420;1.35e-31;9!UBERON:0007245;1.35e-31;9!UBERON:0010009;1.35e-31;9!UBERON:0010011;1.35e-31;9!UBERON:0000454;1.35e-31;9!UBERON:0000200;1.86e-31;6!UBERON:0001871;1.43e-27;6!UBERON:0005383;1.46e-24;3!UBERON:0005382;1.46e-24;3!UBERON:0001872;2.36e-24;5!UBERON:0001017;2.87e-23;75!UBERON:0000955;2.01e-20;68!UBERON:0009663;1.51e-18;7!UBERON:0001876;4.02e-17;2!UBERON:0001873;8.21e-17;2!UBERON:0001954;1.37e-16;2!UBERON:0003022;1.37e-16;2!UBERON:0002421;1.37e-16;2!UBERON:0002600;1.37e-16;2!UBERON:0001016;2.32e-16;83!UBERON:0002771;2.99e-16;2!UBERON:0000125;1.80e-14;9!UBERON:0002308;1.80e-14;9!UBERON:0007023;7.94e-12;114!UBERON:0001870;2.26e-11;3!UBERON:0001874;1.60e-09;1!UBERON:0001882;1.81e-09;1!UBERON:0005403;1.81e-09;1!UBERON:0002022;2.21e-09;1!UBERON:0003112;3.72e-09;1!UBERON:0011158;3.72e-09;1!UBERON:0003128;3.72e-09;1!UBERON:0001703;3.72e-09;1!UBERON:0002241;3.72e-09;1!UBERON:0002581;8.16e-09;1!UBERON:0007190;8.16e-09;1!UBERON:0011216;1.44e-08;132!UBERON:0010314;2.19e-07;132!UBERON:0002021;6.76e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,3.09e-99,32;UBERON:0001893,2.25e-93,34;UBERON:0002791,7.02e-90,32;UBERON:0003528,1.48e-84,34;UBERON:0002020,1.48e-84,34;UBERON:0002619,4.91e-82,22;UBERON:0002780,3.02e-77,41;UBERON:0001890,3.02e-77,41;UBERON:0003080,3.02e-77,41;UBERON:0006240,3.02e-77,41;UBERON:0000956,2.96e-72,25;UBERON:0000203,2.96e-72,25;UBERON:0001950,1.12e-68,20;UBERON:0000073,2.29e-65,53;UBERON:0002616,2.29e-65,53;UBERON:0001049,9.68e-62,56;UBERON:0005068,9.68e-62,56;UBERON:0006241,9.68e-62,56;UBERON:0007135,9.68e-62,56;UBERON:0000955,2.01e-54,68;UBERON:0006238,2.01e-54,68;UBERON:0003056,3.26e-51,61;UBERON:0001017,1.30e-49,81;UBERON:0001016,2.14e-44,89;UBERON:0003075,2.83e-41,82;UBERON:0007284,2.83e-41,82;UBERON:0000349,1.75e-39,5;UBERON:0002346,3.28e-39,86;UBERON:0007023,3.95e-35,114;UBERON:0000369,2.35e-32,4;UBERON:0002435,2.35e-32,4;UBERON:0000204,2.35e-32,4;UBERON:0010082,2.35e-32,4;UBERON:0010371,7.36e-32,104;UBERON:0000200,9.51e-32,6;UBERON:0002420,1.07e-31,9;UBERON:0007245,1.07e-31,9;UBERON:0010009,1.07e-31,9;UBERON:0010011,1.07e-31,9;UBERON:0000454,1.07e-31,9;UBERON:0001871,9.73e-28,6;UBERON:0010314,6.26e-27,132;UBERON:0005383,1.11e-24,3;UBERON:0005382,1.11e-24,3;UBERON:0001872,2.83e-24,5;UBERON:0004121,1.15e-21,171;UBERON:0000924,1.15e-21,171;UBERON:0006601,1.15e-21,171;UBERON:0009663,1.32e-18,7;UBERON:0011216,2.48e-17,223;UBERON:0001876,3.57e-17,2;UBERON:0001873,6.23e-17,2;UBERON:0010122,6.23e-17,2;UBERON:0002771,1.60e-16,2;UBERON:0001954,1.88e-16,2;UBERON:0003022,1.88e-16,2;UBERON:0002421,1.88e-16,2;UBERON:0002600,1.88e-16,2;UBERON:0000025,1.31e-15,192;UBERON:0000125,1.62e-14,9;UBERON:0002308,1.62e-14,9;UBERON:0004111,1.00e-11,240;UBERON:0001870,2.26e-11,3;UBERON:0001874,1.60e-09,1;UBERON:0001882,1.89e-09,1;UBERON:0005403,1.89e-09,1;UBERON:0002022,2.40e-09,1;UBERON:0003112,3.31e-09,1;UBERON:0011158,3.31e-09,1;UBERON:0003128,3.31e-09,1;UBERON:0001703,3.31e-09,1;UBERON:0002241,3.31e-09,1;UBERON:0004761,3.31e-09,1;UBERON:0009617,3.31e-09,1;UBERON:0007190,5.75e-09,1;UBERON:0002581,7.85e-09,1;UBERON:0000483,2.36e-08,306;UBERON:0000119,3.10e-08,309;UBERON:0002021,7.18e-07,5 | |||
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| ||
|short_description=p16@LMO3 | |||
}} | }} |
Latest revision as of 16:16, 17 September 2015
Short description: | p16@LMO3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_LMO3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000539232, ENST00000541295_5end |
EntrezGene: | LMO3 |
HGNC: | 6643 |
UniProt: | Q05D86B4DG90 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data