FFCP PHASE1:Hg19::chr12:3309893..3309896,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10867 | |EntrezGene=10867 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21640 | |HGNC=21640 | ||
|TSSclassifier=strong | |||
|UniProt=B5MD23 | |UniProt=B5MD23 | ||
|association_with_transcript=-444bp_to_ENST00000407263_5end | |||
|cluster_id=chr12:3309893..3309896,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_6_at_TSPAN9_5end | |||
|id=chr12:3309893..3309896,+ | |||
|ontology_enrichment_celltype=CL:0000319!3.31e-09!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.98e-131;3 | |||
|ontology_enrichment_disease=DOID:3030!3.31e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.00e-35!57;UBERON:0005068!4.00e-35!57;UBERON:0006241!4.00e-35!57;UBERON:0007135!4.00e-35!57;UBERON:0002616!8.64e-30!59;UBERON:0000955!4.52e-28!69;UBERON:0006238!4.52e-28!69;UBERON:0001017!2.65e-26!82;UBERON:0007023!6.89e-26!115;UBERON:0005743!5.84e-25!86;UBERON:0002780!7.41e-24!41;UBERON:0001890!7.41e-24!41;UBERON:0006240!7.41e-24!41;UBERON:0003080!2.97e-23!42;UBERON:0003075!2.16e-22!86;UBERON:0007284!2.16e-22!86;UBERON:0000073!2.42e-22!94;UBERON:0001016!2.42e-22!94;UBERON:0002346!2.85e-21!90;UBERON:0001869!3.11e-21!32;UBERON:0002020!5.38e-20!34;UBERON:0003528!5.38e-20!34;UBERON:0002619!5.54e-20!22;UBERON:0001893!6.24e-20!34;UBERON:0000033!9.16e-19!123;UBERON:0000153!9.53e-18!129;UBERON:0007811!9.53e-18!129;UBERON:0000956!1.47e-17!25;UBERON:0000203!1.47e-17!25;UBERON:0001950!7.25e-17!20;UBERON:0001897!1.27e-16!2;UBERON:0002791!1.30e-16!33;UBERON:0003056!1.70e-15!61;UBERON:0001872!2.77e-14!5;UBERON:0003076!3.77e-13!15;UBERON:0003057!3.77e-13!15;UBERON:0004121!1.07e-12!169;UBERON:0000924!2.49e-12!173;UBERON:0006601!2.49e-12!173;UBERON:0004733!6.65e-11!12;UBERON:0002028!6.65e-11!12;UBERON:0007277!6.65e-11!12;UBERON:0004732!4.49e-10!13;UBERON:0000025!1.85e-09!194;UBERON:0001000!2.22e-09!1;UBERON:0005352!2.22e-09!1;UBERON:0004111!3.77e-09!241;UBERON:0003112!4.54e-09!1;UBERON:0000032!4.54e-09!1;UBERON:0005253!4.54e-09!1;UBERON:0003128!4.54e-09!1;UBERON:0002241!4.54e-09!1;UBERON:0001703!4.54e-09!1;UBERON:0004761!4.54e-09!1;UBERON:0009617!4.54e-09!1;UBERON:0007190!5.31e-09!1;UBERON:0002902!7.85e-09!1;UBERON:0009899!7.85e-09!1;UBERON:0002581!9.17e-09!1;UBERON:0001882!1.07e-08!1;UBERON:0005403!1.07e-08!1;UBERON:0002680!1.33e-08!9;UBERON:0001895!1.33e-08!9;UBERON:0010092!1.33e-08!9;UBERON:0000477!4.03e-08!286;UBERON:0002021!4.43e-07!5;UBERON:0000349!6.18e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.83e-66;6!UBERON:0002680;9.75e-45;9!UBERON:0001895;9.75e-45;9!UBERON:0004733;5.98e-34;12!UBERON:0002028;5.98e-34;12!UBERON:0004732;1.86e-31;13!UBERON:0000073;3.43e-07;53!UBERON:0002616;3.43e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.83e-66,6;UBERON:0006215,2.83e-66,6;UBERON:0002680,9.75e-45,9;UBERON:0001895,9.75e-45,9;UBERON:0010092,9.75e-45,9;UBERON:0004733,5.98e-34,12;UBERON:0002028,5.98e-34,12;UBERON:0007277,5.98e-34,12;UBERON:0004732,1.86e-31,13;UBERON:0003076,1.82e-27,15;UBERON:0003057,1.82e-27,15;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p6@TSPAN9 | |||
}} | }} |
Latest revision as of 05:23, 18 September 2015
Short description: | p6@TSPAN9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TSPAN9_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -444bp_to_ENST00000407263_5end |
EntrezGene: | TSPAN9 |
HGNC: | 21640 |
UniProt: | B5MD23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.83e-66 | 6 |
rhombic lip | 2.83e-66 | 6 |
regional part of metencephalon | 9.75e-45 | 9 |
metencephalon | 9.75e-45 | 9 |
future metencephalon | 9.75e-45 | 9 |
segmental subdivision of hindbrain | 5.98e-34 | 12 |
hindbrain | 5.98e-34 | 12 |
presumptive hindbrain | 5.98e-34 | 12 |
segmental subdivision of nervous system | 1.86e-31 | 13 |
posterior neural tube | 1.82e-27 | 15 |
chordal neural plate | 1.82e-27 | 15 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |