FFCP PHASE1:Hg19::chr12:54332652..54332671,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3229 | |EntrezGene=3229 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5125 | |HGNC=5125 | ||
|TSSclassifier=strong | |||
|UniProt=P31276 | |UniProt=P31276 | ||
|association_with_transcript=76bp_to_NM_017410,uc001sei.2,uc010sop.1_5end | |||
|cluster_id=chr12:54332652..54332671,+ | |||
|coexpression_cluster_id=C2216 | |||
|description=CAGE_peak_2_at_HOXC13_5end | |||
|id=chr12:54332652..54332671,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.10e-21!254;CL:0000076!1.14e-15!62;CL:0000077!1.31e-08!19;CL:0002327!4.39e-08!4;CL:0002150!5.84e-07!3;CL:0000861!5.84e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000515;3.21e-11;3!CL:0002327;4.60e-09;4!CL:0000056;1.58e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.30e-14,253;CL:0000076,1.43e-09,63;CL:0002327,3.60e-09,4;CL:0000515,1.59e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000515;1.58e-08;4!UBERON:0008947;1.63e-08;29 | |||
|ontology_enrichment_disease=DOID:0050687!1.85e-40!143;DOID:162!1.18e-34!235;DOID:14566!1.97e-33!239;DOID:305!2.53e-31!106;DOID:1749!3.37e-19!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.07e-12;14!DOID:305;1.42e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.01e-21,106;DOID:0050687,3.29e-21,143;DOID:162,8.22e-18,235;DOID:14566,3.07e-17,239;DOID:1749,5.13e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.94e-16!9;UBERON:0001557!3.14e-08!19;UBERON:0001911!4.39e-08!4;UBERON:0005333!4.39e-08!4;UBERON:0008425!4.39e-08!4;UBERON:0005311!4.39e-08!4;UBERON:0003343!6.74e-08!4;UBERON:0004785!6.74e-08!4;UBERON:0008947!1.18e-07!38;UBERON:0003258!1.18e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.02e-31;9!UBERON:0001557;4.02e-31;9!UBERON:0001911;4.60e-09;4!UBERON:0003343;4.60e-09;4!UBERON:0004785;4.60e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.44e-31,9;UBERON:0001557,3.16e-17,19;UBERON:0001911,3.60e-09,4;UBERON:0005333,3.60e-09,4;UBERON:0008425,3.60e-09,4;UBERON:0005311,3.60e-09,4;UBERON:0003343,4.24e-09,4;UBERON:0004785,4.24e-09,4 | |||
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| ||
|short_description=p2@HOXC13 | |||
}} | }} |
Latest revision as of 04:02, 19 September 2015
Short description: | p2@HOXC13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HOXC13_5end |
Coexpression cluster: | C2216_keratoacanthoma_cervical_synovial_Wilms_gastric_oral_mesothelioma |
Association with transcript: | 76bp_to_NM_017410, uc001sei.2, uc010sop.1_5end |
EntrezGene: | HOXC13 |
HGNC: | 5125 |
UniProt: | P31276 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.30e-14 | 253 |
squamous epithelial cell | 1.43e-09 | 63 |
mammary gland epithelial cell | 3.60e-09 | 4 |
skeletal muscle myoblast | 1.59e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.44e-31 | 9 |
upper respiratory tract | 3.16e-17 | 19 |
mammary gland | 3.60e-09 | 4 |
mammary bud | 3.60e-09 | 4 |
mammary ridge | 3.60e-09 | 4 |
mammary placode | 3.60e-09 | 4 |
mucosa of oral region | 4.24e-09 | 4 |
respiratory system mucosa | 4.24e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.01e-21 | 106 |
cell type cancer | 3.29e-21 | 143 |
cancer | 8.22e-18 | 235 |
disease of cellular proliferation | 3.07e-17 | 239 |
squamous cell carcinoma | 5.13e-12 | 14 |