FFCP PHASE1:Hg19::chr12:56114189..56114208,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:56114189..56114208,+ to FFCP PHASE1:Hg19::chr12:56114189..56114208,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5959 | |EntrezGene=5959 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9940 | |HGNC=9940 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000548082,ENST00000550608_5end | |||
|cluster_id=chr12:56114189..56114208,+ | |||
|description=CAGE_peak_2_at_RDH5_5end | |||
|id=chr12:56114189..56114208,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.32e-18!180;CL:0000057!1.92e-11!75;CL:0000136!1.10e-10!15;CL:0000680!1.09e-09!57;CL:0000056!1.09e-09!57;CL:0000355!1.09e-09!57;CL:0000187!3.16e-08!54;CL:0000183!1.07e-07!59;CL:0000359!5.41e-07!32;CL:0000192!5.65e-07!42;CL:0000514!5.65e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000136;4.70e-15;13!CL:0002540;4.03e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.47e-17,15;CL:0002540,3.25e-10,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.29e-15!365;UBERON:0000914!5.52e-15!83;UBERON:0002329!5.52e-15!83;UBERON:0003077!5.52e-15!83;UBERON:0003059!5.52e-15!83;UBERON:0007282!5.52e-15!83;UBERON:0009618!5.52e-15!83;UBERON:0007285!5.52e-15!83;UBERON:0004290!7.90e-12!70;UBERON:0002385!2.30e-11!63;UBERON:0001015!2.30e-11!63;UBERON:0000383!2.30e-11!63;UBERON:0001134!1.39e-10!61;UBERON:0002036!1.39e-10!61;UBERON:0003082!1.39e-10!61;UBERON:0000481!1.50e-09!347;UBERON:0000486!1.74e-09!82;UBERON:0005256!2.24e-09!143;UBERON:0003102!7.48e-09!95;UBERON:0002199!2.78e-08!45;UBERON:0002416!2.78e-08!45;UBERON:0000468!7.65e-08!659;UBERON:0002100!8.31e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;3.36e-08;14!UBERON:0002204;3.93e-08;70!UBERON:0001434;2.52e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,3.28e-08,14 | |||
|phase1_expression=0.54503513781167,5.1384125733836,1.9733616573436,1.0007329835313,7.15137751083661,0,10.1319951267324,3.15859936713415,11.7533532689927,0,0,0,0,6.93091576576261,4.97096063591874,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0.408001382488506,0.626909442956176,0.85870796139317,0.136874425072884,1.00434111675842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2529523714611,4.51204119572301,2.02785126545153,0,0.486634870302636,0.378139268656271,1.10864698731282,0.263504357079378,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0.496971951695318,1.01304409331664,2.51577443545116,1.72101972449288,1.41867352879343,0,0,0.24666754841716,0.311211035399766,0,0,0,0,0.234321431833797,4.05808099879417,0,5.67904986096844,0.117434498643765,0,0.561803226808994,6.32877930890169,0.368502951935304,5.57959218349133,1.18800285728205,2.22540236350701,0,0.718618141816238,1.0100166837244,1.00094815897571,3.04770527032601,0.877955241761676,2.14541457059314,2.55404700141215,0.113432183160021,0.358779271377724,2.13557388818567,0.635795703478686,2.70081986475962,0.618315175430633,0.257640540045629,0.18611685633159,1.18143432568886,0.292311015483596,0,1.19664868234989,0.969876340912871,1.42003837006646,0.705264687593482,0.67824236924195,0,0,0,0,0,0.232387885739037,0,0,0,0,0.643240938192885,4.14404764057442,1.85747171212792,11.5500717067134,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,0.982827216677626,3.54473944008842,0,0.737930631258681,0.171567810298526,0,0,0,0,0,1.03993478527958,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.358234090811393,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.15312891703765,0,0.26593811658487,0,1.28603687131071,4.25547396069835,2.66422179016099,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,1.91699884393266,1.14861935834114,0,3.4747513600219,3.90405012845728,1.25342674267927,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.736148950314839,2.00068208423871,0.813795071099207,0.415941723061614,2.3195768543631,1.41932173530541,2.10854546986884,0.902838299183157,4.5481500811197,3.10419213877515,0,0.737476674166813,2.08520674723399,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0.61384789315225,0.280660094433074,0.384417447767103,0,0.321707842287215,0,0.771048469013278,2.30830242907065,2.05317890034523,0.519254429183621,0.813472649219715,0.362578348774867,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0.541892875087706,0,0.254876273045038,0,0,0,0,3.07740150139667,0.656029291399411,4.88067591996455,4.32772248920434,0,0,0.574265537996172,0,0,0.193341436584244,2.31072925671967,1.5350367472613,1.37836572484531,0.859361958946189,0.725083469571143,0.511359764496605,0.534192213880424,0,0,0.127612712494584,0,0.929691098594572,3.77774816196768,1.3940745403212,0,2.12922412126809,0.869932992075073,0.37064843820784,0.429374660225974,0.372158369359667,3.79655309662471,0.38126038784765,2.55897791311334,0.42793898803392,2.22742273548156,0,0.179872457583315,0,0,1.2130948894399,1.58510321173008,1.26377536871694,0,0.243713489631284,0,0,0,2.26016233240486,0.551365343546124,0.66343897524122,0.876901770507525,1.73632660280006,1.31178950409327,0,0.6196469961995,1.40847801266121,0,0,0,1.41904425628239,8.65541304720423,7.57378253807774,1.51789269506286,0.699869440489966,0,0,0,3.85989583184795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.00683535014765,0,0,0,0,0,0,0,0.140669416410513,0,0,0,1.39473591775749,0.276283915531148,0.251932747854276,0.409074730008619,0,4.66559381492711,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,5.07499702804355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23840590304675,0.611030144933625,0,0,0,0.337005664903385,0,0.234264445725339,0,0,0.242780379534093,0.394584402849391,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0.277349346026277,0,0,0,1.22308667769421,0.171986032471617,0,0,0,0.581934098930517,0,5.19755703795225,0,0,0.0633107959558787,0,0,1.49417096317547,0,0.144090417154106,0.114536596165916,0,0,0.124252535565433,0,0.951329442515298,0.523014231561666,0,0,0,0,0,0.859530882839914,0,0,3.43740636017525,0,1.79711100449092,1.28767814440971,0,0.0671834724867263,0.720599767084807,0,0,0.329663433524666,0.337017719270924,0.295282444544246,0,0,0.272406812223151,0,0,0,0,0,0,0,1.02447419488958,1.04909176269996,0,0,0,0,0.662091970365432,0,5.42999601753713,0.864221491201268,2.61269888087527,0,0,0.851940108927109,0,6.15519381447946,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,25.5688367583653,41.8652123017909,46.5645276680462,21.6395936268471,0,0.886068179966986,0.366078794705889,0,0.573409195690071,0.332787154610557,0.558867626472451,0,0,0.454947352624943,0.570930667089935,0.705797459094515,0,0,1.34329322598187,0,3.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| 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| ||
|short_description=p2@RDH5 | |||
}} | }} |
Latest revision as of 07:59, 19 September 2015
Short description: | p2@RDH5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RDH5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000548082, ENST00000550608_5end |
EntrezGene: | RDH5 |
HGNC: | 9940 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.47e-17 | 15 |
mesenchymal stem cell of the bone marrow | 3.25e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 3.28e-08 | 14 |