FFCP PHASE1:Hg19::chr12:7060440..7060453,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:7060440..7060453,+ to FFCP PHASE1:Hg19::chr12:7060440..7060453,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5777 | |EntrezGene=5777 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9658 | |HGNC=9658 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000543744_5end | |||
|cluster_id=chr12:7060440..7060453,+ | |||
|description=CAGE_peak_5_at_PTPN6_5end | |||
|id=chr12:7060440..7060453,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.17e-85!172;CL:0000566!1.17e-85!172;CL:0002032!4.57e-80!165;CL:0000837!4.57e-80!165;CL:0000738!3.34e-78!140;CL:0000988!7.38e-78!182;CL:0002031!1.96e-69!124;CL:0002087!5.57e-65!119;CL:0000763!1.38e-48!112;CL:0000049!1.38e-48!112;CL:0000766!1.21e-42!76;CL:0000839!2.02e-39!70;CL:0000557!5.16e-39!71;CL:0002009!1.68e-35!65;CL:0002194!2.79e-34!63;CL:0000576!2.79e-34!63;CL:0000040!2.79e-34!63;CL:0000559!2.79e-34!63;CL:0002057!5.97e-30!42;CL:0000860!8.59e-27!45;CL:0000542!1.77e-26!53;CL:0000051!1.77e-26!53;CL:0000838!5.86e-26!52;CL:0000134!7.59e-15!358;CL:0000791!1.16e-14!18;CL:0000789!1.16e-14!18;CL:0002420!1.16e-14!18;CL:0002419!1.16e-14!18;CL:0000790!1.16e-14!18;CL:0000084!6.89e-14!25;CL:0000827!6.89e-14!25;CL:0002320!9.29e-14!365;CL:0000945!1.13e-11!24;CL:0000826!1.13e-11!24;CL:0000219!4.43e-10!390;CL:0000625!9.84e-10!11;CL:0000236!1.77e-08!14;CL:0002393!4.30e-07!9;CL:0002397!4.30e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;6.15e-26;39!CL:0000234;6.15e-26;39!CL:0000860;4.80e-25;33!CL:0002057;4.80e-25;33!CL:0000766;1.77e-23;69!CL:0000576;4.26e-21;48!CL:0002087;3.90e-20;104!CL:0000791;4.01e-19;18!CL:0000789;4.01e-19;18!CL:0002419;4.01e-19;18!CL:0000738;9.41e-19;136!CL:0000084;3.26e-17;25!CL:0000542;1.83e-16;53!CL:0000988;8.57e-15;177!CL:0000763;1.08e-14;100!CL:0000625;1.30e-12;11!CL:0000945;2.96e-12;24!CL:0000219;4.92e-09;193!CL:0000236;8.20e-09;13!CL:0000097;1.62e-07;5!CL:0000624;2.31e-07;6!CL:0000235;2.81e-07;6!CL:0000840;8.71e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.62e-95,168;CL:0000738,1.98e-92,136;CL:0000988,1.09e-88,177;CL:0002032,2.49e-88,161;CL:0000837,2.49e-88,161;CL:0002031,1.41e-81,120;CL:0002087,9.36e-79,115;CL:0000766,5.73e-52,72;CL:0000763,1.35e-51,108;CL:0000049,1.35e-51,108;CL:0000557,1.14e-48,67;CL:0000839,5.31e-46,66;CL:0002009,9.78e-44,61;CL:0002194,4.29e-42,59;CL:0000576,4.29e-42,59;CL:0000040,4.29e-42,59;CL:0000559,4.29e-42,59;CL:0000473,2.30e-39,48;CL:0000234,2.30e-39,48;CL:0000860,1.73e-33,42;CL:0002057,1.73e-33,42;CL:0000542,3.39e-31,53;CL:0000051,3.39e-31,53;CL:0000838,1.69e-30,52;CL:0000134,1.96e-25,354;CL:0002320,3.07e-24,361;CL:0000219,4.53e-20,386;CL:0000791,2.53e-19,18;CL:0000789,2.53e-19,18;CL:0002420,2.53e-19,18;CL:0002419,2.53e-19,18;CL:0000790,2.53e-19,18;CL:0000084,2.02e-17,25;CL:0000827,2.02e-17,25;CL:0000048,4.45e-15,427;CL:0000723,2.11e-14,433;CL:0000034,5.47e-14,441;CL:0000625,1.22e-12,11;CL:0000945,3.21e-12,24;CL:0000826,3.21e-12,24;CL:0000236,8.55e-10,14;CL:0000624,1.38e-07,6;CL:0002393,1.53e-07,9;CL:0002397,1.53e-07,9;CL:0000097,1.79e-07,5;CL:0002028,1.79e-07,5;CL:0000235,3.06e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;9.35e-24;42!CL:0000790;4.01e-19;18!CL:0000051;1.83e-16;53!CL:0000049;2.01e-13;108 | |||
|ontology_enrichment_disease=DOID:1240!1.23e-09!39;DOID:2531!1.66e-09!51;DOID:0060083!1.66e-09!51;DOID:8692!9.76e-08!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.87e-08,39;DOID:2531,2.07e-07,51;DOID:0060083,2.07e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.59e-45!102;UBERON:0003061!1.59e-45!102;UBERON:0002193!2.28e-41!112;UBERON:0002371!5.26e-33!80;UBERON:0001474!6.09e-29!86;UBERON:0002405!4.08e-25!115;UBERON:0004765!9.59e-22!101;UBERON:0001434!9.59e-22!101;UBERON:0002384!1.17e-12!375;UBERON:0007023!3.72e-11!115;UBERON:0003081!2.73e-09!216;UBERON:0000178!7.11e-08!15;UBERON:0000179!7.11e-08!15;UBERON:0000463!7.11e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.08e-11;15!UBERON:0000179;7.08e-11;15!UBERON:0000463;7.08e-11;15!UBERON:0002390;6.69e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.42e-59,98;UBERON:0003061,1.42e-59,98;UBERON:0002193,2.84e-55,108;UBERON:0002405,7.96e-45,93;UBERON:0002371,4.34e-42,76;UBERON:0001474,1.47e-37,82;UBERON:0004765,1.75e-32,90;UBERON:0001434,2.57e-27,100;UBERON:0002384,1.28e-22,371;UBERON:0003081,6.41e-17,203;UBERON:0000178,1.11e-10,15;UBERON:0000179,1.11e-10,15;UBERON:0000463,1.11e-10,15;UBERON:0002204,5.29e-10,167;UBERON:0004177,2.70e-08,7;UBERON:0005057,2.70e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.50176521385249,5.17233713534658,5.74588703589859,1.96682138424452,0.767658796194425,1.39334510984468,0,0,0,0,0.142169232487422,1.76160263600908,0.553995408531877,2.4065333696417,1.51907609501096,3.13481663935894,3.56283032620878,0.77272670290256,4.65274364094607,2.64513160582167,1.94067248950253,6.0431549595478,6.98985409637104,7.43295290148249,9.49384894663097,10.5025889676931,6.3850202069918,3.44745680736619,5.16387746867061,5.41705946377367,1.88242339542605,2.72906150057846,2.02251136000576,5.20342617030534,3.20929027076094,3.83602275479425,4.61791820261403,8.7764009353518,6.39337125799041,0.580418477257168,1.70215567407342,1.24564449799115,12.8136819280939,15.1230046341858,8.68755378820467,0.605399502633369,0.736555271975129,1.58231193720442,3.16882929467913,3.18906449947565,2.72556239160889,2.69588714751588,2.55300717830561,2.89306056054744,5.70025487482497,5.9675003159727,4.56660384411585,3.51992488922645,3.27683166757279,3.55803701545422,3.41384178053206,2.00197993518006,1.72425731986345,5.94940385506376,6.67837628174755,3.41527781465669,1.17447437874188,1.91136614062614,1.32171328579026,0.560508562981536,0.526768169550154,2.75393678159366,2.35806457649499,3.90642848099067,2.00623794468814,9.77766799900771,10.8892995318989,17.534405556712,2.22820913770347,2.94605907474837,3.54454231333794,5.68688113906533,2.30564375506215,2.21100890851793,4.1109476150919,4.14525026678773,2.31842468588042,9.78691316869599,6.68852070224283,12.5442628565972,3.96582699441482,9.96373283364995,6.8725489096526,7.59059076058509,6.37130828648194,9.76625180784628,6.65316431113862,6.47473012034423,9.59899583658138,2.49861453104692,11.3653080981128,6.56902397536837,1.61285394579786,1.33720097891754,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,3.8945687238562,4.17911369518241,6.24902414438666,1.19245312152671,3.43196946468077,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.0463228654644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96973604869918,13.1042388477973,6.39113997841531,0,0,0,0,0,0,6.40462209264727,7.30802002309776,9.12243708379397,4.17947864909188,6.56460653817176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,3.01354254859276,2.10833939483032,0,0,0,0,0,0,2.24170287987055,1.18218456121156,2.37190332345469,2.56686072559497,0,0,0,0.167516265334349,0,4.49404214368309,8.97484377612075,5.8018171881045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,3.01999881146064,3.20182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0.522870902049801,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,5.07447609232169,8.41100927856613,5.69647187174163,7.38518503919146,3.70226045777575,11.6725196014689,5.40031437238115,8.72437693923697,0,0.962479855263359,0,1.85803175125719,0.432807638929335,13.0189573327598,1.91311527274587,3.79200805722352,1.34053759092657,2.75175657541048,0.973865820823666,1.40398589056729,0.912938716132769,2.19351854082233,2.50634477090067,1.18504244461122,2.56940920165919,2.42159648629257,1.70338495076131,1.37402137902306,1.53620382154229,1.3420566473545,0.834245708559542,2.73543333562856,0,0,1.08182271390393,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.398495976502139,8.28851746593443,0,0,3.44637455290994,0,0,0,9.20830266408369,0.0986434056369336,9.57932369387759,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66866435871542,1.82832850090172,0,0,0,0,0.635746315921515,0,0,0,0,0.995261931078505,0.442287822516696,0,0,0,0,0.269604531922708,1.60515529459758,0,0,0,0,0,1.20990716048664,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.678923115418936,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,2.36598618851383,0,0.229160424011684,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,2.45552662990775,0,0.272406812223151,0,0,0,2.4747128070665,2.32140586367385,0.485996453264197,0,0.236417121897595,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.492555124496034,0,0,0.293104467356165,0,0.517131825446202,0.13223260174269,0,0,1.28144895081234,0.78602152549833,3.72815149812476,5.95399226174341,0,0.730755590285376,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0.221858103073705,0.18628920882415,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0.389720617678777,0.132864840313363,0,0,0,0,0.59996218756479,1.17360902663555,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0.192687675289379,0,0,0.205116364240755,0,0.138314504928436,0.161475645631851,0,0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| ||
|short_description=p5@PTPN6 | |||
}} | }} |
Latest revision as of 08:13, 20 September 2015
Short description: | p5@PTPN6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PTPN6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000543744_5end |
EntrezGene: | PTPN6 |
HGNC: | 9658 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.42e-59 | 98 |
blood island | 1.42e-59 | 98 |
hemolymphoid system | 2.84e-55 | 108 |
immune system | 7.96e-45 | 93 |
bone marrow | 4.34e-42 | 76 |
bone element | 1.47e-37 | 82 |
skeletal element | 1.75e-32 | 90 |
skeletal system | 2.57e-27 | 100 |
connective tissue | 1.28e-22 | 371 |
lateral plate mesoderm | 6.41e-17 | 203 |
blood | 1.11e-10 | 15 |
haemolymphatic fluid | 1.11e-10 | 15 |
organism substance | 1.11e-10 | 15 |
musculoskeletal system | 5.29e-10 | 167 |
hemopoietic organ | 2.70e-08 | 7 |
immune organ | 2.70e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.87e-08 | 39 |
hematologic cancer | 2.07e-07 | 51 |
immune system cancer | 2.07e-07 | 51 |