FFCP PHASE1:Hg19::chr12:7242235..7242247,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:7242235..7242247,- to FFCP PHASE1:Hg19::chr12:7242235..7242247,-: NSchange) |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:7242235..7242247,- | |||
|coexpression_cluster_id=C424 | |||
|description=CAGE_peak_at_chr12:7242235..7242247,- | |||
|id=chr12:7242235..7242247,- | |||
|ontology_enrichment_celltype=CL:0000055!5.36e-11!180;CL:0000057!3.29e-10!75 | |||
|ontology_enrichment_celltype_v019=CL:0000499;8.39e-10;28!CL:0000136;4.03e-09;13!CL:0000135;7.68e-08;3!CL:0000388;7.68e-08;3!CL:0002615;6.35e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.30e-11,15;CL:0000499,1.31e-09,28;CL:0000135,7.94e-08,3;CL:0000388,7.94e-08,3;CL:0002615,5.86e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.41e-08!27;UBERON:0002100!3.35e-08!216;UBERON:0005256!4.41e-08!143;UBERON:0000475!6.36e-08!365;UBERON:0000481!8.45e-08!347;UBERON:0000948!1.48e-07!24;UBERON:0005498!1.48e-07!24;UBERON:0004140!1.48e-07!24;UBERON:0009881!1.48e-07!24;UBERON:0004141!1.48e-07!24;UBERON:0003084!1.48e-07!24;UBERON:0007005!1.48e-07!24;UBERON:0004139!1.48e-07!24;UBERON:0004291!1.48e-07!24;UBERON:0003104!2.56e-07!238;UBERON:0009142!2.56e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;7.68e-08;3!UBERON:0000043;7.68e-08;3!UBERON:0007845;7.68e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,7.94e-08,3;UBERON:0000043,7.94e-08,3;UBERON:0007845,7.94e-08,3;UBERON:0003104,7.32e-07,160;UBERON:0009142,7.32e-07,160 | |||
|phase1_expression=1.2717486548939,7.06531728840244,1.69145284915165,2.00146596706261,6.25745532198203,6.97870819280295,0,1.26343974685366,4.70134130759709,0,0,0,0,0.495065411840187,1.98838425436749,1.34465029290355,0,0,0.487932798790507,0.123121058076788,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0.670700859703636,0.12786256184353,0.361439152384566,2.00535164254356,2.462390822334,0,4.37971383272372,0.0945348171640679,0,0.175669571386252,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.993943903390637,0.633152558322899,0.132409180813219,5.16305917347865,0.354668382198357,1.68203280042692,0,0.74000264525148,0,0.67355336034844,0,0.454072282934794,0.576175924479999,0,0,0,0.298897361103602,0,0,0.140450806702248,0,0,0.413303124703062,3.56400857184616,6.42894016124248,0,2.87447256726495,0.168336113954066,0.125118519871964,0,0,0.919463387397059,2.70428506031874,0,0.89694817844431,1.92201649936711,0.847727604638247,0.300091096084402,0.824420233907511,1.28820270022815,0.18611685633159,0.337552664482532,0.389748020644795,0.504867548488229,0.828449087780694,5.4959659318396,0.710019185033229,0,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,1.28648187638577,0,0.928735856063958,0.721879481669586,0,0.337169380156203,0,0.220587945464788,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0.4115740113314,1.47008711385542,27.8861076608028,10.8110993834539,12.9973779469909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761016608938393,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,1.30788020649984,0.07333828582095,0.517086863031111,3.57656445851882,0,0,1.04007436911366,0,0,0.266422179016099,0.857867961948885,2.17048642156577,0.823240336780769,0.325736184293735,1.06617584622764,0,0,0,0.499864955910285,0,0,0,0.239624855491583,2.29723871668228,0,0.144781306667579,1.64381058040307,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,2.94459580125936,1.00034104211935,0.813795071099207,2.49565033836969,2.49800584316026,0.315404830067869,1.17141414992713,0.300946099727719,11.3703752027992,2.0694614258501,0,0,0.695068915744663,0.195801157462741,1.37257369524342,0,0,0,0,0,0,0,0.306923946576125,1.12264037773229,0.512556597022804,0.511707249066704,0.321707842287215,2.96836132889982,0.154209693802656,0.532685175939381,0,0.519254429183621,0.116210378459959,0,0,0,1.14814448164607,1.0925470080403,4.19598127870157,0,0,0,0,0,0,0,0,1.54227252690289,0,0.501689773854853,0,0,0,0,0,0,0,0.325378394664303,2.16386124460217,0.27470839445503,0,0,0.650060246036521,1.6068392984416,0.193341436584244,0.308097234229289,0.307007349452259,0.137836572484531,0.859361958946189,1.30515024522806,0,0.356128142586949,0.165284915360978,0,0,0,0,0.62962469366128,0,0.308033580176089,0.532306030317022,0.869932992075073,0,0.143124886741991,0,0.316379424718726,0.38126038784765,0.511795582622668,0.855877976067841,0,0,0.179872457583315,1.92175920815238,0.471249609382746,0,1.58510321173008,0.421258456238981,0,2.43713489631284,0,0.136499911407986,0.989838023675989,1.13008116620243,0,0,0.876901770507525,0.578775534266688,1.31178950409327,0,0,0,0,0.0982490410131212,0,0,4.85547561184627,14.4889752902357,0,0.349934720244983,0,0,0,2.2594512186427,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0,1.59398390600856,0,0,0,0,0,0,0,0,1.7755813014648,0,0,0,0,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0.438770794307945,0,0,0.769502585037971,0.797594390929008,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,1.32691817219825,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,2.62090002363045,0,0,0,0,1.74580229679155,0,1.35588444468319,0,0,0,0,0.240476460754601,2.98834192635094,0,0,0,0,0,0,0,0,0,0.305994652908965,0.288950589901519,0,0.273810757783986,0,0,0,2.23425921017803,0.687481272035051,0.717873024576814,0.399358000997982,0.429226048136571,0.669514372325618,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472834243795189,0.157363764404994,0,0,0,3.57347663186684,3.97255182219259,0.25426853765475,0.542999601753713,1.72844298240254,0,0,0,0,0,5.8620893471233,1.32506888912221,0,0,0,0,0.854299300541557,0.628817220398664,0.828478110694391,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0.3755727921195,0,0.110929051536852,0.0620964029413835,0,0,0,0.285465333544967,0.235265819698172,0,0,0.298509605773748,0.934853239388898,0.554805861502613,0.378806010550178,2.0125432140206,6.22867855117575,0.457680136793847,1.81477108515887,0.466311601748341,1.47855149989634,0.159296767163702,0.449803112163605,0,0.829412415681711,0,0,1.20206087197775,0.761610424337591,0.813741466409323,0.181848659202559,0.537052785212442,0.464033759878494,0,0,1.37358282073117,1.34699795506368,0,0,0.214441591374926,0,1.36023555307363,0.231522474323834,0.734210113519403,0.179088841081487,1.23520578864389,0.877136198314828,0.176689145945881,0,0.337884881306145,0,0,0.607719912354764,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0.736423801007363,0,0.622077260032973,0,0,0,0,0,0.425149840203366,0,0,0,0,0,1.76337971845342,7.65613693383001,0,0,0,0,0.252071696221718,0,0.161475645631851,0,0.0981477185010256,0,0.366857197043358,0,0.381382095467167,0,0,1.80504788038217,0.20170506870352,0,0,0,0,0,0,0.206686796501184,0,0,0,2.97726707033577,0,0.127762427639595,0.535701835878287,0,0,0,0.443511850813194,0,0.685952037749674,0,0.0657727735628491,0,0.111231401892069,1.02041020705668,0.157115589916002,0,0.913158720509496,0.215927591218621,1.43325506366115,0.357382720883282,0,0,0,0,0.414432328326074,0.6828739083758,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.307988420568741,2.3196288626764,1.45713297917742,0,0,0.118920090777569,0,0,0,0.308696632431779,0.218559560503957,0,2.20633489578515,0,0,0.297046400327086,1.2679671827502,0.169927114687817,0.469919589899268,0.386747327841463,0,0,0,0,0,0.458729283404541,0,0,0,0,1.5870805215462,8.18389039966853,10.6300394585226,5.19151874548547,0,0,0,0,0.26721740526556,0,0,1.43979526614655,0.535928260312357,0,0,0.426467963801962,0.714193294391221,0.0645889098360061,0.0620747142958579,0,0.572824424503484,0.202117188958219,1.95945073107265,0.342233301085281,0.134704106029175,1.00411087549747,0.665320713092027,0,0,0,0,0,0.488965776731466,0.406896178315738,3.99454064511308,1.20764276154616,0 | |phase1_expression=1.2717486548939,7.06531728840244,1.69145284915165,2.00146596706261,6.25745532198203,6.97870819280295,0,1.26343974685366,4.70134130759709,0,0,0,0,0.495065411840187,1.98838425436749,1.34465029290355,0,0,0.487932798790507,0.123121058076788,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0.670700859703636,0.12786256184353,0.361439152384566,2.00535164254356,2.462390822334,0,4.37971383272372,0.0945348171640679,0,0.175669571386252,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.993943903390637,0.633152558322899,0.132409180813219,5.16305917347865,0.354668382198357,1.68203280042692,0,0.74000264525148,0,0.67355336034844,0,0.454072282934794,0.576175924479999,0,0,0,0.298897361103602,0,0,0.140450806702248,0,0,0.413303124703062,3.56400857184616,6.42894016124248,0,2.87447256726495,0.168336113954066,0.125118519871964,0,0,0.919463387397059,2.70428506031874,0,0.89694817844431,1.92201649936711,0.847727604638247,0.300091096084402,0.824420233907511,1.28820270022815,0.18611685633159,0.337552664482532,0.389748020644795,0.504867548488229,0.828449087780694,5.4959659318396,0.710019185033229,0,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,1.28648187638577,0,0.928735856063958,0.721879481669586,0,0.337169380156203,0,0.220587945464788,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0.4115740113314,1.47008711385542,27.8861076608028,10.8110993834539,12.9973779469909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761016608938393,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,1.30788020649984,0.07333828582095,0.517086863031111,3.57656445851882,0,0,1.04007436911366,0,0,0.266422179016099,0.857867961948885,2.17048642156577,0.823240336780769,0.325736184293735,1.06617584622764,0,0,0,0.499864955910285,0,0,0,0.239624855491583,2.29723871668228,0,0.144781306667579,1.64381058040307,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,2.94459580125936,1.00034104211935,0.813795071099207,2.49565033836969,2.49800584316026,0.315404830067869,1.17141414992713,0.300946099727719,11.3703752027992,2.0694614258501,0,0,0.695068915744663,0.195801157462741,1.37257369524342,0,0,0,0,0,0,0,0.306923946576125,1.12264037773229,0.512556597022804,0.511707249066704,0.321707842287215,2.96836132889982,0.154209693802656,0.532685175939381,0,0.519254429183621,0.116210378459959,0,0,0,1.14814448164607,1.0925470080403,4.19598127870157,0,0,0,0,0,0,0,0,1.54227252690289,0,0.501689773854853,0,0,0,0,0,0,0,0.325378394664303,2.16386124460217,0.27470839445503,0,0,0.650060246036521,1.6068392984416,0.193341436584244,0.308097234229289,0.307007349452259,0.137836572484531,0.859361958946189,1.30515024522806,0,0.356128142586949,0.165284915360978,0,0,0,0,0.62962469366128,0,0.308033580176089,0.532306030317022,0.869932992075073,0,0.143124886741991,0,0.316379424718726,0.38126038784765,0.511795582622668,0.855877976067841,0,0,0.179872457583315,1.92175920815238,0.471249609382746,0,1.58510321173008,0.421258456238981,0,2.43713489631284,0,0.136499911407986,0.989838023675989,1.13008116620243,0,0,0.876901770507525,0.578775534266688,1.31178950409327,0,0,0,0,0.0982490410131212,0,0,4.85547561184627,14.4889752902357,0,0.349934720244983,0,0,0,2.2594512186427,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0,1.59398390600856,0,0,0,0,0,0,0,0,1.7755813014648,0,0,0,0,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0.438770794307945,0,0,0.769502585037971,0.797594390929008,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,1.32691817219825,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,2.62090002363045,0,0,0,0,1.74580229679155,0,1.35588444468319,0,0,0,0,0.240476460754601,2.98834192635094,0,0,0,0,0,0,0,0,0,0.305994652908965,0.288950589901519,0,0.273810757783986,0,0,0,2.23425921017803,0.687481272035051,0.717873024576814,0.399358000997982,0.429226048136571,0.669514372325618,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472834243795189,0.157363764404994,0,0,0,3.57347663186684,3.97255182219259,0.25426853765475,0.542999601753713,1.72844298240254,0,0,0,0,0,5.8620893471233,1.32506888912221,0,0,0,0,0.854299300541557,0.628817220398664,0.828478110694391,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0.3755727921195,0,0.110929051536852,0.0620964029413835,0,0,0,0.285465333544967,0.235265819698172,0,0,0.298509605773748,0.934853239388898,0.554805861502613,0.378806010550178,2.0125432140206,6.22867855117575,0.457680136793847,1.81477108515887,0.466311601748341,1.47855149989634,0.159296767163702,0.449803112163605,0,0.829412415681711,0,0,1.20206087197775,0.761610424337591,0.813741466409323,0.181848659202559,0.537052785212442,0.464033759878494,0,0,1.37358282073117,1.34699795506368,0,0,0.214441591374926,0,1.36023555307363,0.231522474323834,0.734210113519403,0.179088841081487,1.23520578864389,0.877136198314828,0.176689145945881,0,0.337884881306145,0,0,0.607719912354764,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0.736423801007363,0,0.622077260032973,0,0,0,0,0,0.425149840203366,0,0,0,0,0,1.76337971845342,7.65613693383001,0,0,0,0,0.252071696221718,0,0.161475645631851,0,0.0981477185010256,0,0.366857197043358,0,0.381382095467167,0,0,1.80504788038217,0.20170506870352,0,0,0,0,0,0,0.206686796501184,0,0,0,2.97726707033577,0,0.127762427639595,0.535701835878287,0,0,0,0.443511850813194,0,0.685952037749674,0,0.0657727735628491,0,0.111231401892069,1.02041020705668,0.157115589916002,0,0.913158720509496,0.215927591218621,1.43325506366115,0.357382720883282,0,0,0,0,0.414432328326074,0.6828739083758,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.307988420568741,2.3196288626764,1.45713297917742,0,0,0.118920090777569,0,0,0,0.308696632431779,0.218559560503957,0,2.20633489578515,0,0,0.297046400327086,1.2679671827502,0.169927114687817,0.469919589899268,0.386747327841463,0,0,0,0,0,0.458729283404541,0,0,0,0,1.5870805215462,8.18389039966853,10.6300394585226,5.19151874548547,0,0,0,0,0.26721740526556,0,0,1.43979526614655,0.535928260312357,0,0,0.426467963801962,0.714193294391221,0.0645889098360061,0.0620747142958579,0,0.572824424503484,0.202117188958219,1.95945073107265,0.342233301085281,0.134704106029175,1.00411087549747,0.665320713092027,0,0,0,0,0,0.488965776731466,0.406896178315738,3.99454064511308,1.20764276154616,0 | ||
|short_description=p@chr12:7242235..7242247,- | |||
}} | }} |
Latest revision as of 12:15, 24 July 2015
Short description: | p@chr12:7242235..7242247, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:7242235..7242247, - |
Coexpression cluster: | C424_Hepatocyte_liver_Synoviocyte_tenocyte_Fibroblast_Adipocyte_Cardiac |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.30e-11 | 15 |
stromal cell | 1.31e-09 | 28 |
fibrocyte | 7.94e-08 | 3 |
tendon cell | 7.94e-08 | 3 |
adipocyte of omentum tissue | 5.86e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 7.94e-08 | 3 |
tendon | 7.94e-08 | 3 |
regular connective tissue | 7.94e-08 | 3 |
mesenchyme | 7.32e-07 | 160 |
entire embryonic mesenchyme | 7.32e-07 | 160 |