FFCP PHASE1:Hg19::chr12:72666647..72666674,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:72666647..72666674,+ to FFCP PHASE1:Hg19::chr12:72666647..72666674,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29953 | |EntrezGene=29953 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30748 | |HGNC=30748 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UKU6 | |UniProt=Q9UKU6 | ||
|association_with_transcript=111bp_to_AY358765_5end | |||
|cluster_id=chr12:72666647..72666674,+ | |||
|coexpression_cluster_id=C1686 | |||
|description=CAGE_peak_4_at_TRHDE_5end | |||
|id=chr12:72666647..72666674,+ | |||
|ontology_enrichment_celltype=CL:1000507!2.94e-07!12;CL:1000494!2.94e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000507;8.65e-09;10!CL:1000494;8.65e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.26e-08,10;CL:1000494,1.26e-08,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!8.45e-16!34;UBERON:0002346!9.34e-16!90;UBERON:0002020!1.98e-15!34;UBERON:0003528!1.98e-15!34;UBERON:0001869!3.71e-15!32;UBERON:0002791!5.82e-15!33;UBERON:0003075!4.16e-14!86;UBERON:0007284!4.16e-14!86;UBERON:0001049!1.13e-13!57;UBERON:0005068!1.13e-13!57;UBERON:0006241!1.13e-13!57;UBERON:0007135!1.13e-13!57;UBERON:0002780!1.48e-13!41;UBERON:0001890!1.48e-13!41;UBERON:0006240!1.48e-13!41;UBERON:0003056!2.65e-13!61;UBERON:0001950!2.82e-13!20;UBERON:0003080!5.37e-13!42;UBERON:0000956!7.89e-13!25;UBERON:0000203!7.89e-13!25;UBERON:0002616!8.58e-13!59;UBERON:0000475!8.76e-13!365;UBERON:0000073!9.92e-13!94;UBERON:0001016!9.92e-13!94;UBERON:0002619!1.27e-12!22;UBERON:0000955!1.49e-12!69;UBERON:0006238!1.49e-12!69;UBERON:0001017!4.00e-12!82;UBERON:0007023!4.41e-12!115;UBERON:0005743!1.78e-11!86;UBERON:0000033!6.95e-11!123;UBERON:0000153!9.73e-11!129;UBERON:0007811!9.73e-11!129;UBERON:0000924!1.19e-10!173;UBERON:0006601!1.19e-10!173;UBERON:0004121!1.77e-09!169;UBERON:0000064!1.15e-08!219;UBERON:0000481!1.72e-07!347;UBERON:0009773!2.94e-07!12;UBERON:0001231!2.94e-07!12;UBERON:0004810!2.94e-07!12;UBERON:0003887!5.04e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;7.45e-25;20!UBERON:0002619;2.38e-22;22!UBERON:0000956;2.55e-19;25!UBERON:0000203;2.55e-19;25!UBERON:0001869;1.46e-15;32!UBERON:0001893;4.34e-14;34!UBERON:0002791;5.07e-13;32!UBERON:0003528;1.16e-11;34!UBERON:0002020;1.16e-11;34!UBERON:0000200;9.77e-11;6!UBERON:0004211;8.65e-09;10!UBERON:0009773;8.65e-09;10!UBERON:0001231;8.65e-09;10!UBERON:0004810;8.65e-09;10!UBERON:0001872;1.27e-08;5!UBERON:0002021;1.27e-08;5!UBERON:0002780;1.47e-08;41!UBERON:0001890;1.47e-08;41!UBERON:0001870;3.25e-08;3!UBERON:0002346;4.99e-07;4!UBERON:0000923;4.99e-07;4!UBERON:0010316;4.99e-07;4!UBERON:0005291;4.99e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.06e-25,20;UBERON:0002619,1.06e-22,22;UBERON:0000956,1.26e-19,25;UBERON:0000203,1.26e-19,25;UBERON:0001869,7.49e-17,32;UBERON:0001893,1.19e-15,34;UBERON:0002791,1.21e-14,32;UBERON:0003528,1.37e-13,34;UBERON:0002020,1.37e-13,34;UBERON:0002780,2.30e-12,41;UBERON:0001890,2.30e-12,41;UBERON:0003080,2.30e-12,41;UBERON:0006240,2.30e-12,41;UBERON:0002346,2.92e-11,86;UBERON:0000200,4.01e-11,6;UBERON:0003056,1.44e-10,61;UBERON:0000073,4.93e-10,53;UBERON:0002616,4.93e-10,53;UBERON:0001049,2.73e-09,56;UBERON:0005068,2.73e-09,56;UBERON:0006241,2.73e-09,56;UBERON:0007135,2.73e-09,56;UBERON:0001872,1.11e-08,5;UBERON:0002021,1.11e-08,5;UBERON:0004810,1.26e-08,10;UBERON:0001870,1.28e-08,3;UBERON:0003075,1.40e-08,82;UBERON:0007284,1.40e-08,82;UBERON:0001016,3.05e-08,89;UBERON:0000955,7.40e-08,68;UBERON:0006238,7.40e-08,68;UBERON:0001017,7.34e-07,81 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.893922188854576,0,0,0,0.522371256399677,0,0,0,0,0.495065411840187,0,0,0,0,0,0.246242116153576,0.408001382488506,0,0,0.684372125364421,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,1.55210578223795,0.43917392846563,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0.323745888736263,0.140450806702248,0.816616685019573,1.35117749042945,0.206651562351531,0,0,0,0,0.336672227908132,0.500474079487857,0.554128230968366,0,0,0,0,2.15267562826634,0.213557388818567,0.211931901159562,1.20036438433761,0.824420233907511,1.54584324027377,0.558350568994769,0,0,1.26216887122057,0.276149695926898,1.13152239773168,2.4850671476163,0.705264687593482,0.847802961552438,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0.129271715757778,0,0,0.531876233169741,1.04007436911366,0,0,1.0656887160644,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,1.42636905040718,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.542530047399471,0.415941723061614,0,0,0.117141414992713,0,0,0,0,0.368738337083406,1.47702144595741,0.587403472388222,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0.462629081407967,0.177561725313127,0.410635780069046,1.03850885836724,0.116210378459959,0,0,0,0.459257792658427,1.0925470080403,0.786746489756545,0.451199612907412,1.61732207919271,1.56869953835371,1.46139224653261,2.00548094896464,0,0,0.431831832204279,0,0.541892875087706,1.00337954770971,1.01950509218015,0,0.671624264166535,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0.193341436584244,0.308097234229289,0,0,0.107420244868274,0,0.255679882248303,0,0,0,0,0,0,0.94443704049192,0,0,0,0,0,0,0,0,0,0.255897791311334,1.28381696410176,0,0,0.359744915166629,0,0.235624804691373,0,0,0,0.975267478179181,0,0,2.45699840534374,0,1.13008116620243,0,0,0,0,0,0.202910376962704,0,0.563391205064483,0,0.0982490410131212,0.35667105148125,1.41904425628239,0,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45792611446766,2.90778940260141,3.17013369252626,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.556543525114529,0,27.6574284647671,0.19924798825107,0.276283915531148,0,0,0,0,0.539210106883961,0,0,0,0,0,1.93866549219044,0.556608588971108,0,0,0,0,0,0,0,0,7.87332456134787,0,0,0.120596438625408,1.52581736317083,0.442317039724898,0,0.87754158861589,0,0,1.92375646259493,0,0,1.25660702173681,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,11.7527621874586,0,0,0,0,0,0,0,0,0.202203398942031,0,0.468528891450678,0,0,0,0.394584402849391,0,3.36680037793539,0,0,0,0,0,0,0,0.569219092059585,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0.685209623233754,1.58971689362392,1.64608069485285,0,0,0.640358984218058,0,0,0,15.6151448054388,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0.482259445395058,0.412618309791701,1.66176135211674,0,0,2.24773359634691,0,0.551639951094387,2.36045646607491,2.95680942254338,0,0.383830394638891,0,0,0,0,0.864221491201268,1.63293680054705,1.19730191562487,2.9553307469762,0,1.24643300672138,0,0,0.258565912723101,0.26446520348538,0,0,0.213574825135389,0.943225830597996,0,0.496166021811951,0,0,0,1.08803560673895,0.2506898940227,1.53172788381731,0,0,1.77213635993397,2.56255156294123,1.251909307065,0,0.221858103073705,0.0620964029413835,0.138348634936231,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0.796483835818512,0,0.155262956876259,0.829412415681711,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.926089897295336,0,0,0,0,0.530067437837643,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0.853533837553127,0,0,0,0,0,0,0,0.314531883711793,0.764467467344097,1.52759276958623,6.1646726829488,3.59413716351106,1.11728983594649,0,0,0,0,0.6124909547064,0.706521476061055,2.8339315265117,0.319267718114302,1.64093091392604,1.26035848110859,1.1756732918917,0.645902582527404,0,0,0,0,0,0,1.3807198521202,0,0.451261970095544,0,0,0.785720083444267,0,0,1.62090203084147,2.34323429584154,1.65349437200947,0.697573912132975,1.09394961803644,0,0.496211178389294,0,0,0,0,0,0.455324382702595,0.0887023701626388,0,0,0.135939465953663,1.51277379194553,0,0.444925607568277,1.0989032999072,0.314231179832004,0,0.913158720509496,0,0,0.142953088353313,0.316027223465453,0,0,1.60342272946051,0,0,0,0,1.064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| ||
|short_description=p4@TRHDE | |||
}} | }} |
Latest revision as of 18:40, 24 September 2015
Short description: | p4@TRHDE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TRHDE_5end |
Coexpression cluster: | C1686_anaplastic_clear_gastrointestinal_carcinoid_acute_occipital_neuroectodermal |
Association with transcript: | 111bp_to_AY358765_5end |
EntrezGene: | TRHDE |
HGNC: | 30748 |
UniProt: | Q9UKU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.26e-08 | 10 |
nephron tubule epithelial cell | 1.26e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
neocortex | 3.06e-25 | 20 |
regional part of cerebral cortex | 1.06e-22 | 22 |
cerebral cortex | 1.26e-19 | 25 |
pallium | 1.26e-19 | 25 |
cerebral hemisphere | 7.49e-17 | 32 |
telencephalon | 1.19e-15 | 34 |
regional part of telencephalon | 1.21e-14 | 32 |
brain grey matter | 1.37e-13 | 34 |
gray matter | 1.37e-13 | 34 |
regional part of forebrain | 2.30e-12 | 41 |
forebrain | 2.30e-12 | 41 |
anterior neural tube | 2.30e-12 | 41 |
future forebrain | 2.30e-12 | 41 |
neurectoderm | 2.92e-11 | 86 |
gyrus | 4.01e-11 | 6 |
pre-chordal neural plate | 1.44e-10 | 61 |
regional part of nervous system | 4.93e-10 | 53 |
regional part of brain | 4.93e-10 | 53 |
neural tube | 2.73e-09 | 56 |
neural rod | 2.73e-09 | 56 |
future spinal cord | 2.73e-09 | 56 |
neural keel | 2.73e-09 | 56 |
parietal lobe | 1.11e-08 | 5 |
occipital lobe | 1.11e-08 | 5 |
nephron tubule epithelium | 1.26e-08 | 10 |
frontal cortex | 1.28e-08 | 3 |
neural plate | 1.40e-08 | 82 |
presumptive neural plate | 1.40e-08 | 82 |
nervous system | 3.05e-08 | 89 |
brain | 7.40e-08 | 68 |
future brain | 7.40e-08 | 68 |
central nervous system | 7.34e-07 | 81 |