FFCP PHASE1:Hg19::chr12:79371576..79371593,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:79371576..79371593,+ to FFCP PHASE1:Hg19::chr12:79371576..79371593,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6857 | |EntrezGene=6857 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11509 | |HGNC=11509 | ||
|TSSclassifier=strong | |||
|UniProt=F8VZY3 | |UniProt=F8VZY3 | ||
|association_with_transcript=11bp_to_ENST00000551304_5end | |||
|cluster_id=chr12:79371576..79371593,+ | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_12_at_SYT1_5end | |||
|id=chr12:79371576..79371593,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;3.67e-08;1!CL:0000164;3.67e-08;1!CL:0000502;3.67e-08;1!CL:0000172;3.67e-08;1!CL:0000173;3.67e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,4.07e-08,1;CL:0000164,4.07e-08,1;CL:0000502,4.07e-08,1;CL:0000172,4.07e-08,1;CL:0000173,4.07e-08,1;CL:0002351,4.07e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.06e-09;3!CL:0002351;3.67e-08;1!UBERON:0006222;1.00e-07;1!UBERON:0010115;1.00e-07;1!UBERON:0006601;1.55e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;3.67e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,4.07e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000073!7.56e-51!94;UBERON:0001016!7.56e-51!94;UBERON:0001017!1.75e-48!82;UBERON:0005743!5.28e-47!86;UBERON:0001049!3.03e-44!57;UBERON:0005068!3.03e-44!57;UBERON:0006241!3.03e-44!57;UBERON:0007135!3.03e-44!57;UBERON:0002616!4.25e-42!59;UBERON:0002780!9.89e-41!41;UBERON:0001890!9.89e-41!41;UBERON:0006240!9.89e-41!41;UBERON:0000955!1.00e-40!69;UBERON:0006238!1.00e-40!69;UBERON:0003080!1.72e-39!42;UBERON:0001869!8.12e-37!32;UBERON:0002020!1.52e-36!34;UBERON:0003528!1.52e-36!34;UBERON:0001893!2.22e-36!34;UBERON:0002791!5.81e-35!33;UBERON:0003075!1.35e-34!86;UBERON:0007284!1.35e-34!86;UBERON:0002346!7.03e-34!90;UBERON:0002619!3.91e-32!22;UBERON:0007023!2.65e-29!115;UBERON:0001950!3.46e-29!20;UBERON:0003056!5.16e-28!61;UBERON:0000956!1.62e-27!25;UBERON:0000203!1.62e-27!25;UBERON:0004121!3.66e-26!169;UBERON:0000924!4.07e-26!173;UBERON:0006601!4.07e-26!173;UBERON:0000033!3.06e-24!123;UBERON:0000153!1.85e-23!129;UBERON:0007811!1.85e-23!129;UBERON:0002420!5.27e-11!9;UBERON:0007245!5.27e-11!9;UBERON:0010009!5.27e-11!9;UBERON:0010011!5.27e-11!9;UBERON:0000454!5.27e-11!9;UBERON:0000200!7.39e-11!6;UBERON:0001871!1.06e-10!7;UBERON:0000025!1.90e-10!194;UBERON:0002308!2.29e-10!9;UBERON:0000125!2.29e-10!9;UBERON:0000349!3.83e-09!5;UBERON:0001872!6.24e-09!5;UBERON:0002021!7.57e-09!5;UBERON:0000064!8.35e-09!219;UBERON:0009663!6.35e-08!7;UBERON:0000369!3.19e-07!4;UBERON:0002435!3.19e-07!4;UBERON:0000204!3.19e-07!4;UBERON:0010082!3.19e-07!4;UBERON:0004733!3.58e-07!12;UBERON:0002028!3.58e-07!12;UBERON:0007277!3.58e-07!12;UBERON:0000922!5.91e-07!612;UBERON:0003076!6.45e-07!15;UBERON:0003057!6.45e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.13e-45;22!UBERON:0001950;1.45e-42;20!UBERON:0000956;7.11e-40;25!UBERON:0000203;7.11e-40;25!UBERON:0001869;9.16e-34;32!UBERON:0002791;9.92e-34;32!UBERON:0003528;1.02e-32;34!UBERON:0002020;1.02e-32;34!UBERON:0001893;2.09e-29;34!UBERON:0002780;5.92e-26;41!UBERON:0001890;5.92e-26;41!UBERON:0001871;2.44e-23;6!UBERON:0000073;2.44e-22;53!UBERON:0002616;2.44e-22;53!UBERON:0000200;1.30e-17;6!UBERON:0000955;3.71e-16;68!UBERON:0001017;2.06e-14;75!UBERON:0002771;2.54e-14;2!UBERON:0001876;3.42e-14;2!UBERON:0002360;9.14e-14;2!UBERON:0002702;9.14e-14;2!UBERON:0000094;9.14e-14;2!UBERON:0010743;9.14e-14;2!UBERON:0001016;3.64e-13;83!UBERON:0002021;2.14e-12;5!UBERON:0000349;2.45e-12;5!UBERON:0001870;1.78e-09;3!UBERON:0003112;3.67e-08;1!UBERON:0011158;3.67e-08;1!UBERON:0003128;3.67e-08;1!UBERON:0001703;3.67e-08;1!UBERON:0002241;3.67e-08;1!UBERON:0002363;1.00e-07;1!UBERON:0001874;1.00e-07;1!UBERON:0011216;3.73e-07;132!UBERON:0002420;4.64e-07;9!UBERON:0007245;4.64e-07;9!UBERON:0010009;4.64e-07;9!UBERON:0010011;4.64e-07;9!UBERON:0000454;4.64e-07;9!UBERON:0002680;4.94e-07;9!UBERON:0001895;4.94e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,4.70e-46,22;UBERON:0001950,3.19e-43,20;UBERON:0000956,1.88e-40,25;UBERON:0000203,1.88e-40,25;UBERON:0001017,2.62e-40,81;UBERON:0000073,1.11e-39,53;UBERON:0002616,1.11e-39,53;UBERON:0003528,4.91e-39,34;UBERON:0002020,4.91e-39,34;UBERON:0001049,2.15e-37,56;UBERON:0005068,2.15e-37,56;UBERON:0006241,2.15e-37,56;UBERON:0007135,2.15e-37,56;UBERON:0002780,1.08e-36,41;UBERON:0001890,1.08e-36,41;UBERON:0003080,1.08e-36,41;UBERON:0006240,1.08e-36,41;UBERON:0002791,2.78e-36,32;UBERON:0001869,2.78e-36,32;UBERON:0001016,6.40e-36,89;UBERON:0001893,4.73e-34,34;UBERON:0000955,3.55e-33,68;UBERON:0006238,3.55e-33,68;UBERON:0003075,1.75e-24,82;UBERON:0007284,1.75e-24,82;UBERON:0003056,8.15e-24,61;UBERON:0001871,1.22e-23,6;UBERON:0002346,3.52e-23,86;UBERON:0007023,9.26e-19,114;UBERON:0010371,1.51e-18,104;UBERON:0000200,4.92e-18,6;UBERON:0010314,2.14e-17,132;UBERON:0004121,8.13e-17,171;UBERON:0000924,8.13e-17,171;UBERON:0006601,8.13e-17,171;UBERON:0011216,7.68e-16,223;UBERON:0002771,1.77e-14,2;UBERON:0001876,2.02e-14,2;UBERON:0002702,3.01e-14,2;UBERON:0002360,1.75e-13,2;UBERON:0000094,1.75e-13,2;UBERON:0010743,1.75e-13,2;UBERON:0002021,1.57e-12,5;UBERON:0000349,1.77e-12,5;UBERON:0001870,8.52e-10,3;UBERON:0000025,2.39e-08,192;UBERON:0003112,3.80e-08,1;UBERON:0011158,3.80e-08,1;UBERON:0003128,3.80e-08,1;UBERON:0001703,3.80e-08,1;UBERON:0002241,3.80e-08,1;UBERON:0004761,3.80e-08,1;UBERON:0009617,3.80e-08,1;UBERON:0002363,1.54e-07,1;UBERON:0007645,1.54e-07,1;UBERON:0007647,1.54e-07,1;UBERON:0010115,1.54e-07,1;UBERON:0001874,1.75e-07,1;UBERON:0002420,4.70e-07,9;UBERON:0007245,4.70e-07,9;UBERON:0010009,4.70e-07,9;UBERON:0010011,4.70e-07,9;UBERON:0000454,4.70e-07,9;UBERON:0002680,7.26e-07,9;UBERON:0001895,7.26e-07,9;UBERON:0010092,7.26e-07,9 | |||
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|short_description=p12@SYT1 | |||
}} | }} |
Latest revision as of 23:22, 24 September 2015
Short description: | p12@SYT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SYT1_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 11bp_to_ENST00000551304_5end |
EntrezGene: | SYT1 |
HGNC: | 11509 |
UniProt: | F8VZY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 4.07e-08 | 1 |
enteroendocrine cell | 4.07e-08 | 1 |
type D enteroendocrine cell | 4.07e-08 | 1 |
somatostatin secreting cell | 4.07e-08 | 1 |
pancreatic D cell | 4.07e-08 | 1 |
progenitor cell of endocrine pancreas | 4.07e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 4.07e-08 | 1 |