FFCP PHASE1:Hg19::chr12:92529815..92529831,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:92529815..92529831,- to FFCP PHASE1:Hg19::chr12:92529815..92529831,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:92529815..92529831,- | |||
|coexpression_cluster_id=C306 | |||
|description=CAGE_peak_at_chr12:92529815..92529831,- | |||
|id=chr12:92529815..92529831,- | |||
|ontology_enrichment_celltype=CL:0000738!1.09e-24!140;CL:0002087!2.85e-24!119;CL:0000542!2.97e-20!53;CL:0000051!2.97e-20!53;CL:0000838!1.12e-19!52;CL:0000037!2.51e-19!172;CL:0000566!2.51e-19!172;CL:0002031!3.68e-19!124;CL:0000988!2.22e-18!182;CL:0002032!2.43e-18!165;CL:0000837!2.43e-18!165;CL:0002057!4.48e-12!42;CL:0000860!1.00e-10!45;CL:0000084!1.55e-10!25;CL:0000827!1.55e-10!25;CL:0000791!3.80e-10!18;CL:0000789!3.80e-10!18;CL:0002420!3.80e-10!18;CL:0002419!3.80e-10!18;CL:0000790!3.80e-10!18;CL:0000236!7.60e-08!14;CL:0000945!1.07e-07!24;CL:0000826!1.07e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.44e-28;18!CL:0000789;2.44e-28;18!CL:0002419;2.44e-28;18!CL:0000625;6.53e-21;11!CL:0000084;5.29e-20;25!CL:0000623;5.88e-20;3!CL:0000542;3.55e-19;53!CL:0000236;1.68e-17;13!CL:0000624;8.15e-11;6!CL:0002393;1.29e-10;6!CL:0002397;1.29e-10;6!CL:0000945;3.06e-09;24!CL:0002087;1.55e-08;104!CL:0000228;1.14e-07;1!CL:0002372;1.14e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.26e-37,52;CL:0000542,2.50e-36,53;CL:0000051,2.50e-36,53;CL:0000791,2.62e-28,18;CL:0000789,2.62e-28,18;CL:0002420,2.62e-28,18;CL:0002419,2.62e-28,18;CL:0000790,2.62e-28,18;CL:0002087,4.67e-23,115;CL:0000738,6.19e-23,136;CL:0000625,7.41e-21,11;CL:0000623,5.01e-20,3;CL:0000825,5.01e-20,3;CL:0000084,5.56e-20,25;CL:0000827,5.56e-20,25;CL:0002031,1.05e-19,120;CL:0000037,1.04e-17,168;CL:0002032,7.26e-17,161;CL:0000837,7.26e-17,161;CL:0000988,1.41e-16,177;CL:0000236,2.62e-16,14;CL:0000624,7.77e-11,6;CL:0000945,2.71e-09,24;CL:0000826,2.71e-09,24;CL:0000228,9.72e-08,1;CL:0002372,9.72e-08,1;CL:0002393,3.43e-07,9;CL:0002397,3.43e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000790;2.44e-28;18!CL:0000051;3.55e-19;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0.46480320348181,0.142169232487422,0,2.76997704265939,2.20598892217156,2.38711957787437,0,0,0,0.145398238779565,0.377875943688809,0,0.232429036905685,0,0,0,0,0.47296445977717,0.689491361473237,0.645484683583826,0,0.564727018627814,0.545812300115692,0.224723484445085,0.612167784741805,0.320929027076094,0,0,0,0,0,0.56738522469114,0,0.251248665256743,0.521482918420201,0,0,0.368277635987565,0.632924774881769,0.211255286311942,0.212604299965044,0,0.336985893439485,0.300353785683013,0.803627933485401,0.855038231223746,0.39783335439818,0,1.75996244461323,0,0,3.41384178053206,0.400395987036012,0.574752439954483,1.32208974556972,0,3.41527781465669,1.76171156811282,1.14681968437569,0,0,0,3.93419540227666,6.6811829667358,2.46721798799411,0,0.651844533267181,0.946895611469467,0,0,0.883817722424512,1.32920336750173,0.270803863765016,0.384273959177026,0.650296737799391,0.164437904603676,0.276350017785848,0.869409257205157,0.889719378972363,1.07016331235885,0,0.113309342697566,0,0.68725489096526,0.253019692019503,0,0,0,1.20460095262218,0.255973222308837,1.24930726552346,0,1.64225599384209,2.21767417547206,4.81392352410313,2.46201486600758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0.112085143993527,1.18218456121156,2.80315847317372,1.54011643535698,0,1.30139853857622,0,0.167516265334349,0,1.49801404789436,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,2.80428461064202,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.822724546172388,0.648473311192717,0,0,0,0,0.490080431962063,0.185803175125719,0.144269212976445,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0.425846237690326,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0.333926115068718,0,1.05562704063997,0,0,0,0,0.123084805461069,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0.221158519862449,0.295547618953547,0,0,0.278847488557207,0,0.341826167541004,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0.489698424477443,0,0,0,0,0,0.593042257361244,0,0.104421949505455,0,0,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0.343189995723929,0.14405479798815,0,0.235694034616795,0,0.104602846312333,0,0,0,0,0,0,0.262887354279314,0,0.458320848023367,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0.393709926058995,0.0846733320657845,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0.335434687599266,0,0,0.105600336519406,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0.197611631897944,0,0,1.08803560673895,0.5013797880454,0.306345576763462,0,0.314108192500469,0,0,0,0,0,0,0.415045904808692,0,0,0,0.941063278792687,0,0.28984205722165,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363697318405119,0,0.464033759878494,0,0,0,0,0,0.385239660814607,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.327130788511688,0.327609848846413,0.245772908753719,0.211312123358627,0.19998739585493,0,0,0,0,0.139879507719444,0.622077260032973,0,0.323474434190045,0.314531883711793,0,0,0.212574920101683,0.247871528518004,0.558644917973244,0,0.0788617450012534,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0.0981477185010256,0,0.183428598521679,0.115525666150338,0,0,0.198916222116275,0,0.20170506870352,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.691403925334676,0,0,0,0.118193840883968,0,0,0,0.280272163313789,0,0.431855182437243,0,0,0,0.23248285073625,0,0,0,0.3414369541879,0,0,0,0.0852134047591577,0,0,0,0,0.111855431797792,0.196300467230486,0.121917924982269,0,0,0,0,0,0.596852325484105,0.118920090777569,0.11294608203896,0.109940516745429,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0.342233301085281,0,0,0,0,0.106727345877715,1.9307228228694,0,0,0,0,0,0,0.320568492303233 | 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| ||
|short_description=p@chr12:92529815..92529831,- | |||
}} | }} |
Latest revision as of 13:32, 24 July 2015
Short description: | p@chr12:92529815..92529831, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:92529815..92529831, - |
Coexpression cluster: | C306_CD4_CD8_Neutrophils_Natural_CD19_CD14_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 4.26e-37 | 52 |
lymphocyte | 2.50e-36 | 53 |
common lymphoid progenitor | 2.50e-36 | 53 |
mature alpha-beta T cell | 2.62e-28 | 18 |
alpha-beta T cell | 2.62e-28 | 18 |
immature T cell | 2.62e-28 | 18 |
mature T cell | 2.62e-28 | 18 |
immature alpha-beta T cell | 2.62e-28 | 18 |
nongranular leukocyte | 4.67e-23 | 115 |
leukocyte | 6.19e-23 | 136 |
CD8-positive, alpha-beta T cell | 7.41e-21 | 11 |
natural killer cell | 5.01e-20 | 3 |
pro-NK cell | 5.01e-20 | 3 |
T cell | 5.56e-20 | 25 |
pro-T cell | 5.56e-20 | 25 |
hematopoietic lineage restricted progenitor cell | 1.05e-19 | 120 |
hematopoietic stem cell | 1.04e-17 | 168 |
hematopoietic oligopotent progenitor cell | 7.26e-17 | 161 |
hematopoietic multipotent progenitor cell | 7.26e-17 | 161 |
hematopoietic cell | 1.41e-16 | 177 |
B cell | 2.62e-16 | 14 |
CD4-positive, alpha-beta T cell | 7.77e-11 | 6 |
lymphocyte of B lineage | 2.71e-09 | 24 |
pro-B cell | 2.71e-09 | 24 |
multinucleate cell | 9.72e-08 | 1 |
myotube | 9.72e-08 | 1 |
intermediate monocyte | 3.43e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.43e-07 | 9 |