FFCP PHASE1:Hg19::chr13:100622496..100622512,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:100622496..100622512,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_at_chr13:100622496..100622512,- | |||
|id=chr13:100622496..100622512,- | |||
|ontology_enrichment_celltype=CL:0000047!3.88e-08!8;CL:0000540!1.00e-07!6;CL:0000031!1.00e-07!6;CL:0000404!1.00e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.57e-09;2!CL:0002178;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.89e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.77e-51;3!UBERON:0010115;4.83e-18;1!UBERON:0006241;9.11e-07;3!UBERON:0003057;9.11e-07;3 | |||
|ontology_enrichment_disease=DOID:0050687!7.46e-10!143;DOID:305!4.73e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:3371;1.03e-17;1!DOID:4549;1.03e-17;1!DOID:5861;1.03e-17;1!DOID:6496;1.03e-17;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,7.37e-18,1;DOID:4549,7.37e-18,1;DOID:5861,7.37e-18,1;DOID:6496,7.37e-18,1 | |||
|ontology_enrichment_uberon=UBERON:0002346!3.57e-23!90;UBERON:0001017!3.61e-22!82;UBERON:0005743!4.52e-22!86;UBERON:0000073!1.86e-21!94;UBERON:0001016!1.86e-21!94;UBERON:0003075!1.19e-20!86;UBERON:0007284!1.19e-20!86;UBERON:0001049!1.09e-16!57;UBERON:0005068!1.09e-16!57;UBERON:0006241!1.09e-16!57;UBERON:0007135!1.09e-16!57;UBERON:0003076!1.22e-15!15;UBERON:0003057!1.22e-15!15;UBERON:0000924!8.36e-15!173;UBERON:0006601!8.36e-15!173;UBERON:0002616!4.13e-13!59;UBERON:0004121!4.72e-13!169;UBERON:0000955!4.18e-12!69;UBERON:0006238!4.18e-12!69;UBERON:0004733!3.63e-11!12;UBERON:0002028!3.63e-11!12;UBERON:0007277!3.63e-11!12;UBERON:0004732!3.83e-10!13;UBERON:0007023!5.18e-10!115;UBERON:0000033!5.83e-10!123;UBERON:0000153!4.71e-09!129;UBERON:0007811!4.71e-09!129;UBERON:0003056!7.19e-09!61;UBERON:0000488!4.03e-07!4;UBERON:0002780!7.38e-07!41;UBERON:0001890!7.38e-07!41;UBERON:0006240!7.38e-07!41;UBERON:0002680!9.87e-07!9;UBERON:0001895!9.87e-07!9;UBERON:0010092!9.87e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;6.62e-26;6!UBERON:0004733;1.23e-22;12!UBERON:0002028;1.23e-22;12!UBERON:0004732;6.28e-21;13!UBERON:0002363;4.83e-18;1!UBERON:0002680;1.62e-17;9!UBERON:0001895;1.62e-17;9!UBERON:0002360;1.07e-09;2!UBERON:0000094;1.07e-09;2!UBERON:0010743;1.07e-09;2!UBERON:0001017;2.17e-07;75!UBERON:0001896;9.11e-07;3!UBERON:0002240;9.11e-07;3!UBERON:0002418;9.11e-07;3!UBERON:0005174;9.11e-07;3!UBERON:0004755;9.11e-07;3!UBERON:0005290;9.11e-07;3!UBERON:0001137;9.11e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,9.94e-28,15;UBERON:0003057,9.94e-28,15;UBERON:0002037,6.62e-26,6;UBERON:0006215,6.62e-26,6;UBERON:0004733,1.38e-22,12;UBERON:0002028,1.38e-22,12;UBERON:0007277,1.38e-22,12;UBERON:0004732,6.96e-21,13;UBERON:0002363,5.26e-18,1;UBERON:0007645,5.26e-18,1;UBERON:0007647,5.26e-18,1;UBERON:0010115,5.26e-18,1;UBERON:0002680,1.62e-17,9;UBERON:0001895,1.62e-17,9;UBERON:0010092,1.62e-17,9;UBERON:0001017,1.55e-15,81;UBERON:0001016,5.96e-14,89;UBERON:0002360,1.12e-09,2;UBERON:0000094,1.12e-09,2;UBERON:0010743,1.12e-09,2;UBERON:0001049,2.42e-07,56;UBERON:0005068,2.42e-07,56;UBERON:0006241,2.42e-07,56;UBERON:0007135,2.42e-07,56;UBERON:0004121,5.19e-07,171;UBERON:0000924,5.19e-07,171;UBERON:0006601,5.19e-07,171;UBERON:0002418,8.15e-07,3;UBERON:0004755,8.15e-07,3;UBERON:0002240,9.12e-07,3;UBERON:0005174,9.12e-07,3;UBERON:0001137,9.12e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.443458794925128,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397589304964456,0,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0.237270619111097,0,0.392442930250692,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0.34779121492523,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0.43596006883328,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52456774533478,0,0.773288812777695,0,3.18969375826582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1750647824022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0.994147647766298,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0.227586896570999,0,0.945550727071745,0,0,0.173624994933292,0.885741385813839,0,13.7323562685375,5.41838373663001,14.7773809476774,0.438770794307945,0.21787692703798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0.485560759068186,0,0,0,3.03295582216742,0.450970258243478,0.103688191397247,0,0,0,0,0.569219092059585,0,0,0,0.34823682632161,0,0,0.0967563312890851,0.146178634172371,0,0.0969890164884194,1.6768664071385,0.677942222341597,0.137041924646751,0,0,0.195551382734803,0.320635281006135,0,0,1.00863292007874,0.229073192331831,0,0.14405479798815,0.372757606696298,0.235694034616795,0,0,0,1.73370353940911,0,0,0,0,0,0,0,0.717873024576814,0,0.429226048136571,0,0,0,0,0,0,0,0.196854963029498,0,0,0.136203406111576,0.482259445395058,0.137539436597234,0.415440338029185,0,0,0.303747783290123,0,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0.681552087141687,0,0,0,0.129282956361551,0,0.171086837884329,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0.471162288750703,0,0,0,1.14681839138014,0.443716206147409,0.807253238237985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0.260994291965212,0,0,0,0,0,0.438568099157414,0,0.192914038270915,0,0,0,0.607719912354764,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327628914576042,0.33946505990805,0,0.619678821295011,0.558644917973244,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0.345786262321089,0.484426936895553,0,0,0,0.183428598521679,0,0,0,0.397832444232549,0,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.0634158101939068,0,0,0,0.175871244359621,0,0,0.336283722218824,0,0,0,0,0,0.135939465953663,0.0657727735628491,0,0,0,0,0,0,0.215927591218621,0,0.714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0.671132590786754,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.942706188406504,0.588925401344836,0.297046400327086,1.2679671827502,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0.0757786982182394,0.267964130156178,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0.244209805832924,0.426909383510862,0,0.449126010532934,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.443458794925128,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397589304964456,0,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0.237270619111097,0,0.392442930250692,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0.34779121492523,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0.43596006883328,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52456774533478,0,0.773288812777695,0,3.18969375826582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1750647824022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0.994147647766298,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0.227586896570999,0,0.945550727071745,0,0,0.173624994933292,0.885741385813839,0,13.7323562685375,5.41838373663001,14.7773809476774,0.438770794307945,0.21787692703798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0.485560759068186,0,0,0,3.03295582216742,0.450970258243478,0.103688191397247,0,0,0,0,0.569219092059585,0,0,0,0.34823682632161,0,0,0.0967563312890851,0.146178634172371,0,0.0969890164884194,1.6768664071385,0.677942222341597,0.137041924646751,0,0,0.195551382734803,0.320635281006135,0,0,1.00863292007874,0.229073192331831,0,0.14405479798815,0.372757606696298,0.235694034616795,0,0,0,1.73370353940911,0,0,0,0,0,0,0,0.717873024576814,0,0.429226048136571,0,0,0,0,0,0,0,0.196854963029498,0,0,0.136203406111576,0.482259445395058,0.137539436597234,0.415440338029185,0,0,0.303747783290123,0,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0.681552087141687,0,0,0,0.129282956361551,0,0.171086837884329,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0.471162288750703,0,0,0,1.14681839138014,0.443716206147409,0.807253238237985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0.260994291965212,0,0,0,0,0,0.438568099157414,0,0.192914038270915,0,0,0,0.607719912354764,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327628914576042,0.33946505990805,0,0.619678821295011,0.558644917973244,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0.345786262321089,0.484426936895553,0,0,0,0.183428598521679,0,0,0,0.397832444232549,0,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.0634158101939068,0,0,0,0.175871244359621,0,0,0.336283722218824,0,0,0,0,0,0.135939465953663,0.0657727735628491,0,0,0,0,0,0,0.215927591218621,0,0.714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0.671132590786754,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.942706188406504,0.588925401344836,0.297046400327086,1.2679671827502,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0.0757786982182394,0.267964130156178,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0.244209805832924,0.426909383510862,0,0.449126010532934,0,0,0,0,0,0 | ||
|short_description=p@chr13:100622496..100622512,- | |||
}} | }} |
Latest revision as of 14:10, 24 July 2015
Short description: | p@chr13:100622496..100622512, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:100622496..100622512, - |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.89e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 9.94e-28 | 15 |
chordal neural plate | 9.94e-28 | 15 |
cerebellum | 6.62e-26 | 6 |
rhombic lip | 6.62e-26 | 6 |
segmental subdivision of hindbrain | 1.38e-22 | 12 |
hindbrain | 1.38e-22 | 12 |
presumptive hindbrain | 1.38e-22 | 12 |
segmental subdivision of nervous system | 6.96e-21 | 13 |
dura mater | 5.26e-18 | 1 |
future meninx | 5.26e-18 | 1 |
ectomeninx | 5.26e-18 | 1 |
future dura mater | 5.26e-18 | 1 |
regional part of metencephalon | 1.62e-17 | 9 |
metencephalon | 1.62e-17 | 9 |
future metencephalon | 1.62e-17 | 9 |
central nervous system | 1.55e-15 | 81 |
nervous system | 5.96e-14 | 89 |
meninx | 1.12e-09 | 2 |
membrane organ | 1.12e-09 | 2 |
meningeal cluster | 1.12e-09 | 2 |
neural tube | 2.42e-07 | 56 |
neural rod | 2.42e-07 | 56 |
future spinal cord | 2.42e-07 | 56 |
neural keel | 2.42e-07 | 56 |
ectoderm-derived structure | 5.19e-07 | 171 |
ectoderm | 5.19e-07 | 171 |
presumptive ectoderm | 5.19e-07 | 171 |
cartilage tissue | 8.15e-07 | 3 |
skeletal tissue | 8.15e-07 | 3 |
spinal cord | 9.12e-07 | 3 |
dorsal region element | 9.12e-07 | 3 |
dorsum | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 7.37e-18 | 1 |
extraosseous chondrosarcoma | 7.37e-18 | 1 |
myxoid chondrosarcoma | 7.37e-18 | 1 |
extraskeletal myxoid chondrosarcoma | 7.37e-18 | 1 |