FFCP PHASE1:Hg19::chr13:37494904..37494911,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4093 | |EntrezGene=4093 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6774 | |HGNC=6774 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_ENST00000483941_5end | |||
|cluster_id=chr13:37494904..37494911,- | |||
|coexpression_cluster_id=C85 | |||
|description=CAGE_peak_24_at_SMAD9_5end | |||
|id=chr13:37494904..37494911,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.48e-40;5!CL:0002321;1.22e-14;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:169!2.48e-12!6;DOID:0050619!6.65e-09!1;DOID:1357!6.65e-09!1;DOID:171!1.40e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:169;4.27e-34;6!DOID:171;3.81e-21;10!DOID:3095;1.80e-10;22!DOID:2994;1.80e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,4.27e-34,6;DOID:171,3.81e-21,10;DOID:3095,1.80e-10,22;DOID:2994,1.80e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0000013!1.08e-14!5;UBERON:0002410!1.08e-14!5;UBERON:0001736!3.58e-09!1;UBERON:0006298!3.58e-09!1;UBERON:0001874!6.16e-09!1;UBERON:0000073!6.44e-09!94;UBERON:0001016!6.44e-09!94;UBERON:0001764!6.65e-09!1;UBERON:0001825!6.65e-09!1;UBERON:0002336!1.78e-08!1;UBERON:0001018!1.78e-08!1;UBERON:0002473!1.78e-08!1;UBERON:0005340!1.78e-08!1;UBERON:0002316!1.78e-08!1;UBERON:0003544!1.78e-08!1;UBERON:0001020!1.78e-08!1;UBERON:0005970!1.78e-08!1;UBERON:0002437!1.78e-08!1;UBERON:0001882!1.91e-08!1;UBERON:0005403!1.91e-08!1;UBERON:0002022!2.22e-08!1;UBERON:0000010!2.24e-08!8;UBERON:0000369!2.78e-08!4;UBERON:0002435!2.78e-08!4;UBERON:0000204!2.78e-08!4;UBERON:0010082!2.78e-08!4;UBERON:0002420!6.38e-08!9;UBERON:0007245!6.38e-08!9;UBERON:0010009!6.38e-08!9;UBERON:0010011!6.38e-08!9;UBERON:0000454!6.38e-08!9;UBERON:0002791!2.80e-07!33;UBERON:0001893!4.67e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.48e-40;5!UBERON:0002410;1.48e-40;5!UBERON:0000010;2.62e-23;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.48e-40,5;UBERON:0002410,1.48e-40,5;UBERON:0000010,2.62e-23,8 | |||
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|short_description=p24@SMAD9 | |||
}} | }} |
Latest revision as of 06:22, 17 September 2015
Short description: | p24@SMAD9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_SMAD9_5end |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | -2bp_to_ENST00000483941_5end |
EntrezGene: | SMAD9 |
HGNC: | 6774 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.48e-40 | 5 |
autonomic nervous system | 1.48e-40 | 5 |
peripheral nervous system | 2.62e-23 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 4.27e-34 | 6 |
neuroectodermal tumor | 3.81e-21 | 10 |
germ cell and embryonal cancer | 1.80e-10 | 22 |
germ cell cancer | 1.80e-10 | 22 |