FFCP PHASE1:Hg19::chr13:51483881..51483935,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:51483881..51483935,+ to FFCP PHASE1:Hg19::chr13:51483881..51483935,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79621 | |EntrezGene=79621 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25671 | |HGNC=25671 | ||
|TSSclassifier=strong | |||
|UniProt=G3XAJ1 | |UniProt=G3XAJ1 | ||
|association_with_transcript=0bp_to_ENST00000422660,ENST00000494721,uc001vfa.3,uc001vfb.3_5end | |||
|cluster_id=chr13:51483881..51483935,+ | |||
|coexpression_cluster_id=C3382 | |||
|description=CAGE_peak_1_at_RNASEH2B_5end | |||
|id=chr13:51483881..51483935,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.17e-25!172;CL:0000566!2.17e-25!172;CL:0000988!3.32e-23!182;CL:0002032!2.93e-22!165;CL:0000837!2.93e-22!165;CL:0000542!7.12e-22!53;CL:0000051!7.12e-22!53;CL:0000838!1.95e-21!52;CL:0002087!9.93e-15!119;CL:0000738!2.58e-14!140;CL:0002031!2.75e-14!124;CL:0000945!1.99e-11!24;CL:0000826!1.99e-11!24;CL:0000084!1.46e-10!25;CL:0000827!1.46e-10!25;CL:0000236!4.02e-10!14;CL:0000791!1.71e-09!18;CL:0000789!1.71e-09!18;CL:0002420!1.71e-09!18;CL:0002419!1.71e-09!18;CL:0000790!1.71e-09!18 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.17e-13;53!CL:0000945;1.56e-11;24!CL:0000084;1.27e-10;25!CL:0000236;9.05e-10;13!CL:0000791;1.77e-09;18!CL:0000789;1.77e-09;18!CL:0002419;1.77e-09;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.40e-26,168;CL:0000988,8.05e-24,177;CL:0002032,9.46e-23,161;CL:0000837,9.46e-23,161;CL:0000542,7.12e-22,53;CL:0000051,7.12e-22,53;CL:0000838,1.95e-21,52;CL:0002087,3.36e-15,115;CL:0002031,1.01e-14,120;CL:0000738,1.07e-14,136;CL:0000945,1.99e-11,24;CL:0000826,1.99e-11,24;CL:0000084,1.46e-10,25;CL:0000827,1.46e-10,25;CL:0000236,4.02e-10,14;CL:0000791,1.71e-09,18;CL:0000789,1.71e-09,18;CL:0002420,1.71e-09,18;CL:0002419,1.71e-09,18;CL:0000790,1.71e-09,18 | |||
|ontology_enrichment_development_v019=CL:0000051;2.17e-13;53!CL:0000790;1.77e-09;18 | |||
|ontology_enrichment_disease=DOID:2531!7.98e-17!51;DOID:0060083!7.98e-17!51;DOID:1240!3.47e-15!39;DOID:8692!1.05e-12!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.45e-12;39!DOID:8692;3.28e-12;31!DOID:2531;2.98e-10;51!DOID:0060083;2.98e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.98e-17,51;DOID:0060083,7.98e-17,51;DOID:1240,3.47e-15,39;DOID:8692,1.05e-12,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@RNASEH2B | |||
}} | }} |
Latest revision as of 18:12, 17 September 2015
Short description: | p1@RNASEH2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RNASEH2B_5end |
Coexpression cluster: | C3382_Hodgkin_acute_chronic_CD19_CD133_thymus_granulocyte |
Association with transcript: | 0bp_to_ENST00000422660, ENST00000494721, uc001vfa.3, uc001vfb.3_5end |
EntrezGene: | RNASEH2B |
HGNC: | 25671 |
UniProt: | G3XAJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 6.40e-26 | 168 |
hematopoietic cell | 8.05e-24 | 177 |
hematopoietic oligopotent progenitor cell | 9.46e-23 | 161 |
hematopoietic multipotent progenitor cell | 9.46e-23 | 161 |
lymphocyte | 7.12e-22 | 53 |
common lymphoid progenitor | 7.12e-22 | 53 |
lymphoid lineage restricted progenitor cell | 1.95e-21 | 52 |
nongranular leukocyte | 3.36e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 1.01e-14 | 120 |
leukocyte | 1.07e-14 | 136 |
lymphocyte of B lineage | 1.99e-11 | 24 |
pro-B cell | 1.99e-11 | 24 |
T cell | 1.46e-10 | 25 |
pro-T cell | 1.46e-10 | 25 |
B cell | 4.02e-10 | 14 |
mature alpha-beta T cell | 1.71e-09 | 18 |
alpha-beta T cell | 1.71e-09 | 18 |
immature T cell | 1.71e-09 | 18 |
mature T cell | 1.71e-09 | 18 |
immature alpha-beta T cell | 1.71e-09 | 18 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.98e-17 | 51 |
immune system cancer | 7.98e-17 | 51 |
leukemia | 3.47e-15 | 39 |
myeloid leukemia | 1.05e-12 | 31 |