FFCP PHASE1:Hg19::chr14:20813564..20813582,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:20813564..20813582,+ to FFCP PHASE1:Hg19::chr14:20813564..20813582,+: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:20813564..20813582,+ | |||
|description=CAGE_peak_at_chr14:20813564..20813582,+ | |||
|id=chr14:20813564..20813582,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000228;2.07e-12;1!CL:0002372;2.07e-12;1!CL:0000540;1.90e-08;6!CL:0000404;1.90e-08;6!CL:0002262;7.82e-07;2!CL:1000398;7.82e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,1.40e-12,1;CL:0002372,1.40e-12,1;CL:0000540,1.94e-08,6;CL:0000031,1.94e-08,6;CL:0000404,1.94e-08,6;CL:0002262,6.80e-07,2;CL:1000398,6.80e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000031;1.90e-08;6 | |||
|ontology_enrichment_disease=DOID:14566!3.35e-07!239;DOID:0050687!4.61e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:154;4.87e-23;2!DOID:4236;4.87e-23;2!DOID:3910;7.82e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,3.91e-23,2;DOID:4236,3.91e-23,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;3.04e-07;7!UBERON:0002771;4.55e-07;2!UBERON:0001905;7.82e-07;2!UBERON:0004903;7.82e-07;2!UBERON:0001281;7.82e-07;2!UBERON:0003497;7.82e-07;2!UBERON:0003909;7.82e-07;2!UBERON:0002757;7.82e-07;2!UBERON:0010134;7.82e-07;2!UBERON:0003835;7.82e-07;2!UBERON:0005408;7.82e-07;2!UBERON:0001899;7.82e-07;2!UBERON:0002173;7.82e-07;2!UBERON:0002186;7.82e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003513,2.69e-07,7;UBERON:0002771,4.56e-07,2;UBERON:0001281,6.80e-07,2;UBERON:0003497,6.80e-07,2;UBERON:0003909,6.80e-07,2;UBERON:0003835,6.80e-07,2 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0.872338524100369,0,0,0,0,0.697801167972428,0.436882744260345,0,0,0,0,0,0.730310090387373,0,0,0.204000691244253,0,0.286235987131057,0.410623275218653,0.502170558379211,0.152826811495903,0.164201178899891,0.314843125254717,0,0,0.154816123316076,0,0,0.369754010166788,0.232401601740905,0.142169232487422,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0,0,0,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0.526768169550154,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0.384273959177026,0.130059347559878,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0.670700859703636,0,0,0.50133791063589,0,0,0.486634870302636,0.189069634328136,0.443458794925128,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0.354668382198357,0,0,0.49333509683432,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0.23486899728753,0.161872944368132,0.280901613404497,0,0.368502951935304,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0.213557388818567,0.211931901159562,0,0,0,0.18611685633159,0.337552664482532,0.0974370051611986,0,0.0920498986422993,0,0,0.10075209822764,0.339121184620975,0,0.272746120590835,0.286804595389004,0.487894824518382,0.265059536642971,0.232387885739037,0.310983165046111,0.504641701751257,0,0,0,0,0,0,0.828147600278907,0.505754070234305,0.241011029883482,0.441175890929576,0.217879444092406,0.71181185733329,0.539325232640658,0.392442930250692,1.53898862778556,0.738155454624648,1.40241773803446,0,0,0,0,0,0.882926198829301,0,0,0,0,0.402115889646523,0,0,0,0,0,0,0,0,0.570762456703795,0.790204397959275,0,0,0,0.297262324577456,0,0,0,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0,0,0,0.317489471460845,0,0,0,0.205654985406647,0.300343057843917,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0,0,0.399891964728228,0,0,0,0,0,1.42636905040718,0.144781306667579,0.205476322550383,0,0,0,0,0.385029108839245,0,0,0.773288812777695,0.167516265334349,1.27587750330633,0,0,0,0,0,0.271265023699736,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0.308419387605311,0,0.0821271560138091,0.519254429183621,0.116210378459959,0.120859449591622,0,0.184161977871793,0,0.182091168006717,0,0.451199612907412,0,0,0,0,0,0,0.647747748306418,0,0,0,0,0,0.223874754722178,0,0.522870902049801,0.512900250232778,0,0,0,1.09883357782012,0,0,0,0,0,0.308097234229289,0.460511024178389,0.551346289938122,0.214840489736547,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0.286249773483982,0,0,0.190630193923825,0.255897791311334,0,0,0.78494864019923,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0.282810863907425,0,0,1.32687795048244,0.876901770507525,0,0,0,0,0,0,0.0982490410131212,0,0,0,0.329294892959902,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0.411362273086194,0,0,0,0.320472213382419,0.962479855263359,0,0.371606350251437,0,0,0.159426272728822,0.59873811429845,0,0.846694330895531,0.324621940274555,0,0,0,0,0,0.802940375518498,0.605399121573143,0,0,0,0,0.166849141711909,0,0.278406173895242,0,0.270455678475983,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0.994147647766298,0.140669416410513,0.333926115068718,0.16480387422676,0.422250816255987,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,1.01701460117107,0,0.344743373241465,0,1.04174996959975,0.885741385813839,0.723578631752448,0,0.663475559587348,0.295547618953547,0.438770794307945,0,0,0.0769502585037971,0.455768223388005,0.23056390438806,0.0897576444097721,0.54323685961004,0,0.0915975934018623,0,0,0.156980256395025,0,0,0.392125068635479,0.167821586975843,0,0,0.632994193584081,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0.104421949505455,0,0.802577647298789,0.702793337176017,0.91227394607833,0.19566461893209,0,0,0,0.61214552326098,0,0.450970258243478,0.103688191397247,0,1.323967823502,0,0,0,0,0.520679215005393,0.0979923974143777,0,0.34945333648406,0.51595809741485,0.580537987734511,0.730893170861856,0,0,0.0882561266915003,0,0.137041924646751,0.397429223405979,0.126621591911757,0.391102765469606,0.160317640503067,0,0.999048047910651,0.432271251462318,0,1.20116498503375,0.14405479798815,0,0.707082103850386,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0.858452096273142,0,0.0671834724867263,0,0,0.236349546921671,0.741742725430498,0.674035438541849,0,0.254019996197353,0,0.272406812223151,0.321506296930038,0.137539436597234,2.07720169014593,0,0,0.182248669974074,0,0.0788057072991982,0.0524545881349981,0,0.35857467866569,0,0.714695326373367,0,0.5085370753095,0.542999601753713,0.864221491201268,0.653174720218818,0,0.246277562248017,0,0,0,0,0.387848869084652,0,0,0,0,0,0,0.496166021811951,0,0.243585196761792,0,0,0,0,0,0,0.886068179966986,3.05065662254908,0.3755727921195,0.573409195690071,0,0.124192805882767,0.691743174681154,0.249960815924213,0,0.285465333544967,0,0.468334905806882,0.144921028610825,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0.310874401165561,0.295710299979268,0.159296767163702,0,0,0.414706207840855,0,0,0,0.380805212168795,0,0.363697318405119,0.107410557042488,0,1.59238355479446,1.60011105865261,0,0,0,0,0,0.260994291965212,0.453411851024545,0,0.244736704506468,0.895444205407437,0,0.219284049578707,0,0.964570191354574,0,0.256241518587947,0.345430341731199,0.303859956177382,0.553033744606923,0,0,0.163565394255844,1.63804924423206,0,0,0,0.213383459388282,0,0.567515953566836,0,0,0,0.127894371303652,0.215649622793364,0.629063767423586,0.109209638192014,0.169732529954025,0,0.123935764259002,0.558644917973244,0,0,0,0.352675943690684,0.3062454773532,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0,0.484426936895553,0,0,0,0.917142992608395,0.231051332300676,0,0.690359926060101,0,0,0.40341013740704,0,0,0.327543835020193,0,0.202612753855184,0,0.413373593002368,0,0.546974809018219,0.548257766857182,0.992422356778588,0.175871244359621,0.383287282918786,1.07140367175657,0,0,0,0,0.460935950223117,0.171488009437418,0.135939465953663,0.0657727735628491,0.709163045303809,0.111231401892069,0,0.157115589916002,0,0,0,0,0,0.158013611732727,0.23248285073625,0.173858272302579,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,0,0,0,0.111855431797792,0.196300467230486,0,0,0.102662806856247,1.1598144313382,0.485710993059139,0.233939463462106,0.795803100645473,0.356760272332706,0,0.549702583727146,0.301925687133347,0,0.218559560503957,0.470317296361523,0.245148321753905,0,0,0,0,0,0,0,0.199882311849858,0.71421575442263,0.352894871715692,0.0802413666891683,0,0.458729283404541,0.286679166302903,0,0,0.872701380680755,0.5290268405154,0.743990036333503,0.924351257262837,0,0,0.327796715891087,0.126698501011437,0.305966489225945,0.26721740526556,0.275684698604535,0.250707539292375,0.151557396436479,0.535928260312357,0,0.310298987585686,0.213233981900981,0.476128862927481,0,0,0.112131862580613,0,0.202117188958219,0,0,0.0673520530145875,0,0,0.162806537221949,0.213454691755431,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0.872338524100369,0,0,0,0,0.697801167972428,0.436882744260345,0,0,0,0,0,0.730310090387373,0,0,0.204000691244253,0,0.286235987131057,0.410623275218653,0.502170558379211,0.152826811495903,0.164201178899891,0.314843125254717,0,0,0.154816123316076,0,0,0.369754010166788,0.232401601740905,0.142169232487422,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0,0,0,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0.526768169550154,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0.384273959177026,0.130059347559878,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0.670700859703636,0,0,0.50133791063589,0,0,0.486634870302636,0.189069634328136,0.443458794925128,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0.354668382198357,0,0,0.49333509683432,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0.23486899728753,0.161872944368132,0.280901613404497,0,0.368502951935304,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0.213557388818567,0.211931901159562,0,0,0,0.18611685633159,0.337552664482532,0.0974370051611986,0,0.0920498986422993,0,0,0.10075209822764,0.339121184620975,0,0.272746120590835,0.286804595389004,0.487894824518382,0.265059536642971,0.232387885739037,0.310983165046111,0.504641701751257,0,0,0,0,0,0,0.828147600278907,0.505754070234305,0.241011029883482,0.441175890929576,0.217879444092406,0.71181185733329,0.539325232640658,0.392442930250692,1.53898862778556,0.738155454624648,1.40241773803446,0,0,0,0,0,0.882926198829301,0,0,0,0,0.402115889646523,0,0,0,0,0,0,0,0,0.570762456703795,0.790204397959275,0,0,0,0.297262324577456,0,0,0,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0,0,0,0.317489471460845,0,0,0,0.205654985406647,0.300343057843917,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0,0,0.399891964728228,0,0,0,0,0,1.42636905040718,0.144781306667579,0.205476322550383,0,0,0,0,0.385029108839245,0,0,0.773288812777695,0.167516265334349,1.27587750330633,0,0,0,0,0,0.271265023699736,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0.308419387605311,0,0.0821271560138091,0.519254429183621,0.116210378459959,0.120859449591622,0,0.184161977871793,0,0.182091168006717,0,0.451199612907412,0,0,0,0,0,0,0.647747748306418,0,0,0,0,0,0.223874754722178,0,0.522870902049801,0.512900250232778,0,0,0,1.09883357782012,0,0,0,0,0,0.308097234229289,0.460511024178389,0.551346289938122,0.214840489736547,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0.286249773483982,0,0,0.190630193923825,0.255897791311334,0,0,0.78494864019923,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0.282810863907425,0,0,1.32687795048244,0.876901770507525,0,0,0,0,0,0,0.0982490410131212,0,0,0,0.329294892959902,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0.411362273086194,0,0,0,0.320472213382419,0.962479855263359,0,0.371606350251437,0,0,0.159426272728822,0.59873811429845,0,0.846694330895531,0.324621940274555,0,0,0,0,0,0.802940375518498,0.605399121573143,0,0,0,0,0.166849141711909,0,0.278406173895242,0,0.270455678475983,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0.994147647766298,0.140669416410513,0.333926115068718,0.16480387422676,0.422250816255987,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,1.01701460117107,0,0.344743373241465,0,1.04174996959975,0.885741385813839,0.723578631752448,0,0.663475559587348,0.295547618953547,0.438770794307945,0,0,0.0769502585037971,0.455768223388005,0.23056390438806,0.0897576444097721,0.54323685961004,0,0.0915975934018623,0,0,0.156980256395025,0,0,0.392125068635479,0.167821586975843,0,0,0.632994193584081,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0.104421949505455,0,0.802577647298789,0.702793337176017,0.91227394607833,0.19566461893209,0,0,0,0.61214552326098,0,0.450970258243478,0.103688191397247,0,1.323967823502,0,0,0,0,0.520679215005393,0.0979923974143777,0,0.34945333648406,0.51595809741485,0.580537987734511,0.730893170861856,0,0,0.0882561266915003,0,0.137041924646751,0.397429223405979,0.126621591911757,0.391102765469606,0.160317640503067,0,0.999048047910651,0.432271251462318,0,1.20116498503375,0.14405479798815,0,0.707082103850386,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0.858452096273142,0,0.0671834724867263,0,0,0.236349546921671,0.741742725430498,0.674035438541849,0,0.254019996197353,0,0.272406812223151,0.321506296930038,0.137539436597234,2.07720169014593,0,0,0.182248669974074,0,0.0788057072991982,0.0524545881349981,0,0.35857467866569,0,0.714695326373367,0,0.5085370753095,0.542999601753713,0.864221491201268,0.653174720218818,0,0.246277562248017,0,0,0,0,0.387848869084652,0,0,0,0,0,0,0.496166021811951,0,0.243585196761792,0,0,0,0,0,0,0.886068179966986,3.05065662254908,0.3755727921195,0.573409195690071,0,0.124192805882767,0.691743174681154,0.249960815924213,0,0.285465333544967,0,0.468334905806882,0.144921028610825,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0.310874401165561,0.295710299979268,0.159296767163702,0,0,0.414706207840855,0,0,0,0.380805212168795,0,0.363697318405119,0.107410557042488,0,1.59238355479446,1.60011105865261,0,0,0,0,0,0.260994291965212,0.453411851024545,0,0.244736704506468,0.895444205407437,0,0.219284049578707,0,0.964570191354574,0,0.256241518587947,0.345430341731199,0.303859956177382,0.553033744606923,0,0,0.163565394255844,1.63804924423206,0,0,0,0.213383459388282,0,0.567515953566836,0,0,0,0.127894371303652,0.215649622793364,0.629063767423586,0.109209638192014,0.169732529954025,0,0.123935764259002,0.558644917973244,0,0,0,0.352675943690684,0.3062454773532,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0,0.484426936895553,0,0,0,0.917142992608395,0.231051332300676,0,0.690359926060101,0,0,0.40341013740704,0,0,0.327543835020193,0,0.202612753855184,0,0.413373593002368,0,0.546974809018219,0.548257766857182,0.992422356778588,0.175871244359621,0.383287282918786,1.07140367175657,0,0,0,0,0.460935950223117,0.171488009437418,0.135939465953663,0.0657727735628491,0.709163045303809,0.111231401892069,0,0.157115589916002,0,0,0,0,0,0.158013611732727,0.23248285073625,0.173858272302579,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,0,0,0,0.111855431797792,0.196300467230486,0,0,0.102662806856247,1.1598144313382,0.485710993059139,0.233939463462106,0.795803100645473,0.356760272332706,0,0.549702583727146,0.301925687133347,0,0.218559560503957,0.470317296361523,0.245148321753905,0,0,0,0,0,0,0,0.199882311849858,0.71421575442263,0.352894871715692,0.0802413666891683,0,0.458729283404541,0.286679166302903,0,0,0.872701380680755,0.5290268405154,0.743990036333503,0.924351257262837,0,0,0.327796715891087,0.126698501011437,0.305966489225945,0.26721740526556,0.275684698604535,0.250707539292375,0.151557396436479,0.535928260312357,0,0.310298987585686,0.213233981900981,0.476128862927481,0,0,0.112131862580613,0,0.202117188958219,0,0,0.0673520530145875,0,0,0.162806537221949,0.213454691755431,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr14:20813564..20813582,+ | |||
}} | }} |
Latest revision as of 18:48, 24 July 2015
Short description: | p@chr14:20813564..20813582, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:20813564..20813582, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 1.40e-12 | 1 |
myotube | 1.40e-12 | 1 |
neuron | 1.94e-08 | 6 |
neuroblast | 1.94e-08 | 6 |
electrically signaling cell | 1.94e-08 | 6 |
endothelial cell of sinusoid | 6.80e-07 | 2 |
endothelial cell of hepatic sinusoid | 6.80e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
trunk blood vessel | 2.69e-07 | 7 |
middle temporal gyrus | 4.56e-07 | 2 |
hepatic sinusoid | 6.80e-07 | 2 |
abdomen blood vessel | 6.80e-07 | 2 |
sinusoid | 6.80e-07 | 2 |
abdominal segment blood vessel | 6.80e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 3.91e-23 | 2 |
carcinosarcoma | 3.91e-23 | 2 |