FFCP PHASE1:Hg19::chr14:24641247..24641304,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:24641247..24641304,+ to FFCP PHASE1:Hg19::chr14:24641247..24641304,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9985 | |EntrezGene=9985 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16879 | |HGNC=16879 | ||
|TSSclassifier=strong | |||
|UniProt=O95072 | |UniProt=O95072 | ||
|association_with_transcript=13bp_to_ENST00000559919,NM_001048205,NM_005132,uc001wmr.2,uc001wms.2_5end | |||
|cluster_id=chr14:24641247..24641304,+ | |||
|coexpression_cluster_id=C3416 | |||
|description=CAGE_peak_1_at_REC8_5end | |||
|id=chr14:24641247..24641304,+ | |||
|ontology_enrichment_celltype=CL:1000449!7.35e-11!16;CL:0002681!7.09e-09!13;CL:0002584!7.09e-09!13;CL:1000507!1.29e-08!12;CL:1000494!1.29e-08!12;CL:1000497!1.57e-08!18;CL:0002518!1.57e-08!18;CL:0000147!6.81e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:1000449;9.71e-12;15!CL:0002681;1.35e-09;12!CL:0002584;1.35e-09;12!CL:1000497;2.30e-09;17!CL:0002518;2.30e-09;17!CL:1000507;9.68e-09;10!CL:1000494;9.68e-09;10!CL:0000147;3.09e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,9.67e-12,15;CL:0002681,1.34e-09,12;CL:0002584,1.34e-09,12;CL:1000497,2.29e-09,17;CL:0002518,2.29e-09,17;CL:1000507,9.76e-09,10;CL:1000494,9.76e-09,10;CL:0000147,2.65e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!1.95e-25!86;UBERON:0007284!1.95e-25!86;UBERON:0002346!8.46e-25!90;UBERON:0005743!7.05e-23!86;UBERON:0003056!1.37e-21!61;UBERON:0000073!1.37e-21!94;UBERON:0001016!1.37e-21!94;UBERON:0001017!1.27e-20!82;UBERON:0001049!8.10e-19!57;UBERON:0005068!8.10e-19!57;UBERON:0006241!8.10e-19!57;UBERON:0007135!8.10e-19!57;UBERON:0002616!1.59e-18!59;UBERON:0000153!3.79e-16!129;UBERON:0007811!3.79e-16!129;UBERON:0000955!4.42e-16!69;UBERON:0006238!4.42e-16!69;UBERON:0000033!1.44e-15!123;UBERON:0004121!1.68e-15!169;UBERON:0000924!1.97e-15!173;UBERON:0006601!1.97e-15!173;UBERON:0007023!9.20e-15!115;UBERON:0002780!8.05e-13!41;UBERON:0001890!8.05e-13!41;UBERON:0006240!8.05e-13!41;UBERON:0003080!1.10e-12!42;UBERON:0000064!2.37e-12!219;UBERON:0003887!1.73e-11!21;UBERON:0000080!2.87e-11!18;UBERON:0002120!2.87e-11!18;UBERON:0004875!2.87e-11!18;UBERON:0005721!2.87e-11!18;UBERON:0005754!2.87e-11!18;UBERON:0007297!2.87e-11!18;UBERON:0002020!4.66e-11!34;UBERON:0003528!4.66e-11!34;UBERON:0006555!7.02e-11!17;UBERON:0005103!7.02e-11!17;UBERON:0000083!7.02e-11!17;UBERON:0009201!7.02e-11!17;UBERON:0004819!7.02e-11!17;UBERON:0006553!7.02e-11!17;UBERON:0003074!7.02e-11!17;UBERON:0003060!7.02e-11!17;UBERON:0004211!7.35e-11!16;UBERON:0001285!7.35e-11!16;UBERON:0007684!7.35e-11!16;UBERON:0003220!7.35e-11!16;UBERON:0004208!7.35e-11!16;UBERON:0001893!7.46e-11!34;UBERON:0002791!1.11e-10!33;UBERON:0002104!1.12e-10!21;UBERON:0000019!1.85e-10!19;UBERON:0000047!1.85e-10!19;UBERON:0004088!1.85e-10!19;UBERON:0003072!1.85e-10!19;UBERON:0003071!1.85e-10!19;UBERON:0004128!1.85e-10!19;UBERON:0001869!2.44e-10!32;UBERON:0000970!2.54e-10!20;UBERON:0004876!9.86e-10!20;UBERON:0001032!4.10e-09!24;UBERON:0004456!4.10e-09!24;UBERON:0000956!5.12e-09!25;UBERON:0000203!5.12e-09!25;UBERON:0001456!5.96e-09!21;UBERON:0001225!7.09e-09!13;UBERON:0008987!7.09e-09!13;UBERON:0000020!9.36e-09!23;UBERON:0009773!1.29e-08!12;UBERON:0001231!1.29e-08!12;UBERON:0004810!1.29e-08!12;UBERON:0007625!1.11e-07!11;UBERON:0000119!1.16e-07!312;UBERON:0003076!1.37e-07!15;UBERON:0003057!1.37e-07!15;UBERON:0000353!1.74e-07!17;UBERON:0000483!1.82e-07!309;UBERON:0000058!1.92e-07!26;UBERON:0002619!2.11e-07!22;UBERON:0001801!2.11e-07!14;UBERON:0001851!2.81e-07!16;UBERON:0000481!3.46e-07!347;UBERON:0001950!6.45e-07!20;UBERON:0004732!6.78e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;9.71e-12;15!UBERON:0004819;9.71e-12;15!UBERON:0001285;9.71e-12;15!UBERON:0007684;9.71e-12;15!UBERON:0002104;2.34e-11;21!UBERON:0000019;3.87e-11;19!UBERON:0000047;3.87e-11;19!UBERON:0004088;3.87e-11;19!UBERON:0010230;3.87e-11;19!UBERON:0000073;4.43e-11;53!UBERON:0002616;4.43e-11;53!UBERON:0000970;5.63e-11;20!UBERON:0003528;2.80e-10;34!UBERON:0002020;2.80e-10;34!UBERON:0002780;3.09e-10;41!UBERON:0001890;3.09e-10;41!UBERON:0002791;3.28e-10;32!UBERON:0001869;3.69e-10;32!UBERON:0001893;5.11e-10;34!UBERON:0001225;1.35e-09;12!UBERON:0008987;1.35e-09;12!UBERON:0000956;1.58e-09;25!UBERON:0000203;1.58e-09;25!UBERON:0001032;2.02e-09;24!UBERON:0004456;2.02e-09;24!UBERON:0000353;3.07e-09;15!UBERON:0001456;3.53e-09;21!UBERON:0000020;4.90e-09;23!UBERON:0004211;9.68e-09;10!UBERON:0009773;9.68e-09;10!UBERON:0001231;9.68e-09;10!UBERON:0004810;9.68e-09;10!UBERON:0000955;1.80e-08;68!UBERON:0007625;3.70e-08;11!UBERON:0001017;3.86e-08;75!UBERON:0001851;5.40e-08;15!UBERON:0001801;7.54e-08;14!UBERON:0002619;8.50e-08;22!UBERON:0004732;2.61e-07;13!UBERON:0001950;2.79e-07;20!UBERON:0001016;4.58e-07;83!UBERON:0004733;6.26e-07;12!UBERON:0002028;6.26e-07;12 | |||
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| ||
|short_description=p1@REC8 | |||
}} | }} |
Latest revision as of 13:40, 19 September 2015
Short description: | p1@REC8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_REC8_5end |
Coexpression cluster: | C3416_Alveolar_Renal_Mesothelial_Retinal_mesothelioma_mesenchymal_Ciliary |
Association with transcript: | 13bp_to_ENST00000559919, NM_001048205, NM_005132, uc001wmr.2, uc001wms.2_5end |
EntrezGene: | REC8 |
HGNC: | 16879 |
UniProt: | O95072 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 9.67e-12 | 15 |
kidney cortical cell | 1.34e-09 | 12 |
renal cortical epithelial cell | 1.34e-09 | 12 |
kidney cell | 2.29e-09 | 17 |
kidney epithelial cell | 2.29e-09 | 17 |
kidney tubule cell | 9.76e-09 | 10 |
nephron tubule epithelial cell | 9.76e-09 | 10 |
pigment cell | 2.65e-07 | 14 |