FFCP PHASE1:Hg19::chr14:35183868..35183883,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:35183868..35183883,- to FFCP PHASE1:Hg19::chr14:35183868..35183883,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1073 | |EntrezGene=1073 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1875 | |HGNC=1875 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y281 | |UniProt=Q9Y281 | ||
|association_with_transcript=12bp_to_ENST00000298159_5end | |||
|cluster_id=chr14:35183868..35183883,- | |||
|description=CAGE_peak_3_at_CFL2_5end | |||
|id=chr14:35183868..35183883,- | |||
|ontology_enrichment_celltype=CL:0000055!2.03e-16!180;CL:0000680!1.35e-10!57;CL:0000056!1.35e-10!57;CL:0000355!1.35e-10!57;CL:0000222!1.96e-10!119;CL:0000187!1.94e-09!54;CL:0000057!3.88e-09!75;CL:0000183!5.06e-09!59;CL:0000192!8.26e-08!42;CL:0000514!8.26e-08!42;CL:0000393!4.82e-07!60;CL:0000211!4.82e-07!60 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,4.19e-11,58;CL:0000056,4.19e-11,58;CL:0000355,4.19e-11,58;CL:0000222,5.68e-11,121;CL:0000187,6.26e-10,55;CL:0000057,1.73e-09,76;CL:0000192,2.69e-08,43;CL:0000514,2.69e-08,43;CL:0000393,1.98e-07,61;CL:0000211,1.98e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!6.91e-19!143;UBERON:0000481!3.96e-17!347;UBERON:0000475!3.99e-17!365;UBERON:0000119!8.89e-17!312;UBERON:0002100!1.94e-16!216;UBERON:0000483!4.14e-16!309;UBERON:0000477!2.24e-15!286;UBERON:0000490!4.33e-15!138;UBERON:0003104!3.79e-14!238;UBERON:0009142!3.79e-14!238;UBERON:0000914!2.04e-13!83;UBERON:0002329!2.04e-13!83;UBERON:0003077!2.04e-13!83;UBERON:0003059!2.04e-13!83;UBERON:0007282!2.04e-13!83;UBERON:0009618!2.04e-13!83;UBERON:0007285!2.04e-13!83;UBERON:0004290!4.16e-12!70;UBERON:0004111!5.02e-12!241;UBERON:0002385!7.84e-12!63;UBERON:0001015!7.84e-12!63;UBERON:0000383!7.84e-12!63;UBERON:0001134!1.16e-11!61;UBERON:0002036!1.16e-11!61;UBERON:0003082!1.16e-11!61;UBERON:0000468!1.08e-10!659;UBERON:0003914!2.71e-10!118;UBERON:0000486!5.21e-10!82;UBERON:0002049!5.02e-09!79;UBERON:0007798!5.02e-09!79;UBERON:0000025!5.71e-09!194;UBERON:0000467!2.52e-08!625;UBERON:0000480!2.61e-08!626;UBERON:0000055!1.42e-07!69;UBERON:0004872!6.06e-07!84 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,2.48e-18,160;UBERON:0009142,2.48e-18,160;UBERON:0005256,1.44e-17,122;UBERON:0000119,1.27e-16,309;UBERON:0000490,3.01e-16,148;UBERON:0000483,5.89e-16,306;UBERON:0002100,1.70e-13,199;UBERON:0002329,1.29e-12,71;UBERON:0003059,1.29e-12,71;UBERON:0007282,1.29e-12,71;UBERON:0004290,1.29e-12,71;UBERON:0009618,1.29e-12,71;UBERON:0003077,2.24e-12,72;UBERON:0007285,2.24e-12,72;UBERON:0007524,2.34e-12,73;UBERON:0002385,2.38e-12,64;UBERON:0001015,2.38e-12,64;UBERON:0000383,2.38e-12,64;UBERON:0001134,3.52e-12,62;UBERON:0002036,3.52e-12,62;UBERON:0003082,3.52e-12,62;UBERON:0004111,1.52e-11,240;UBERON:0007503,2.14e-11,78;UBERON:0000486,1.86e-10,83;UBERON:0003914,5.67e-10,117;UBERON:0002049,1.02e-08,78;UBERON:0007798,1.02e-08,78;UBERON:0000025,1.70e-08,192;UBERON:0000055,2.82e-07,68 | |||
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| ||
|short_description=p3@CFL2 | |||
}} | }} |
Latest revision as of 19:18, 19 September 2015
Short description: | p3@CFL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CFL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_ENST00000298159_5end |
EntrezGene: | CFL2 |
HGNC: | 1875 |
UniProt: | Q9Y281 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 4.19e-11 | 58 |
myoblast | 4.19e-11 | 58 |
multi-potent skeletal muscle stem cell | 4.19e-11 | 58 |
mesodermal cell | 5.68e-11 | 121 |
muscle cell | 6.26e-10 | 55 |
fibroblast | 1.73e-09 | 76 |
smooth muscle cell | 2.69e-08 | 43 |
smooth muscle myoblast | 2.69e-08 | 43 |
electrically responsive cell | 1.98e-07 | 61 |
electrically active cell | 1.98e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 2.48e-18 | 160 |
entire embryonic mesenchyme | 2.48e-18 | 160 |
trunk mesenchyme | 1.44e-17 | 122 |
cell layer | 1.27e-16 | 309 |
unilaminar epithelium | 3.01e-16 | 148 |
epithelium | 5.89e-16 | 306 |
trunk | 1.70e-13 | 199 |
somite | 1.29e-12 | 71 |
presomitic mesoderm | 1.29e-12 | 71 |
presumptive segmental plate | 1.29e-12 | 71 |
dermomyotome | 1.29e-12 | 71 |
trunk paraxial mesoderm | 1.29e-12 | 71 |
paraxial mesoderm | 2.24e-12 | 72 |
presumptive paraxial mesoderm | 2.24e-12 | 72 |
dense mesenchyme tissue | 2.34e-12 | 73 |
muscle tissue | 2.38e-12 | 64 |
musculature | 2.38e-12 | 64 |
musculature of body | 2.38e-12 | 64 |
skeletal muscle tissue | 3.52e-12 | 62 |
striated muscle tissue | 3.52e-12 | 62 |
myotome | 3.52e-12 | 62 |
anatomical conduit | 1.52e-11 | 240 |
epithelial vesicle | 2.14e-11 | 78 |
multilaminar epithelium | 1.86e-10 | 83 |
epithelial tube | 5.67e-10 | 117 |
vasculature | 1.02e-08 | 78 |
vascular system | 1.02e-08 | 78 |
tube | 1.70e-08 | 192 |
vessel | 2.82e-07 | 68 |