FFCP PHASE1:Hg19::chr15:48818401..48818413,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:48818401..48818413,- to FFCP PHASE1:Hg19::chr15:48818401..48818413,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:48818401..48818413,- | |||
|coexpression_cluster_id=C834 | |||
|description=CAGE_peak_at_chr15:48818401..48818413,- | |||
|id=chr15:48818401..48818413,- | |||
|ontology_enrichment_celltype=CL:0000055!3.37e-32!180;CL:0000057!4.31e-24!75;CL:0000680!1.15e-13!57;CL:0000056!1.15e-13!57;CL:0000355!1.15e-13!57;CL:0000187!1.53e-12!54;CL:0002620!2.78e-12!23;CL:0000183!1.42e-11!59;CL:0000192!2.39e-10!42;CL:0000514!2.39e-10!42;CL:0000393!2.49e-10!60;CL:0000211!2.49e-10!60;CL:0000359!2.62e-10!32;CL:0000048!5.04e-10!430;CL:0000723!3.28e-09!436;CL:0002334!8.60e-09!12;CL:0000034!3.41e-08!444;CL:0000222!7.16e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.03e-10;23!CL:0002334;1.55e-09;12!CL:0000134;2.39e-07;55!CL:1000306;2.76e-07;4!CL:0002547;2.76e-07;4!CL:0000057;5.22e-07;73!CL:0000153;5.48e-07;9!CL:0000447;5.48e-07;9!CL:0002320;9.29e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.85e-20,76;CL:0000048,1.98e-14,427;CL:0000723,7.33e-14,433;CL:0000034,3.94e-13,441;CL:0002620,4.55e-10,23;CL:0002334,6.29e-10,12;CL:0002320,7.22e-10,361;CL:0000134,1.74e-09,354;CL:0000219,9.29e-08,386;CL:1000306,2.61e-07,4;CL:0002547,2.61e-07,4;CL:0000153,6.06e-07,9;CL:0000447,6.06e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.93e-08;5!DOID:450;1.93e-08;5!DOID:66;1.93e-08;5!DOID:423;1.93e-08;5!DOID:0080000;1.93e-08;5!DOID:11722;1.93e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.53e-08,5;DOID:450,1.53e-08,5;DOID:66,1.53e-08,5;DOID:423,1.53e-08,5;DOID:0080000,1.53e-08,5;DOID:11722,1.53e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!9.11e-17!83;UBERON:0002329!9.11e-17!83;UBERON:0003077!9.11e-17!83;UBERON:0003059!9.11e-17!83;UBERON:0007282!9.11e-17!83;UBERON:0009618!9.11e-17!83;UBERON:0007285!9.11e-17!83;UBERON:0004290!2.68e-14!70;UBERON:0001134!2.73e-12!61;UBERON:0002036!2.73e-12!61;UBERON:0003082!2.73e-12!61;UBERON:0000486!8.94e-12!82;UBERON:0002385!2.15e-11!63;UBERON:0001015!2.15e-11!63;UBERON:0000383!2.15e-11!63;UBERON:0005256!2.30e-11!143;UBERON:0004872!5.46e-11!84;UBERON:0004923!5.24e-10!57;UBERON:0002199!1.81e-09!45;UBERON:0002416!1.81e-09!45;UBERON:0002049!1.22e-08!79;UBERON:0007798!1.22e-08!79;UBERON:0002100!1.72e-08!216;UBERON:0000475!2.28e-08!365;UBERON:0001637!2.82e-08!42;UBERON:0003509!2.82e-08!42;UBERON:0004572!2.82e-08!42;UBERON:0003102!8.42e-08!95;UBERON:0002097!1.64e-07!40;UBERON:0001981!2.77e-07!60;UBERON:0007500!2.77e-07!60;UBERON:0004537!2.77e-07!60;UBERON:0006965!2.77e-07!60;UBERON:0004535!4.21e-07!110;UBERON:0004573!5.54e-07!33;UBERON:0004571!5.54e-07!33;UBERON:0001009!6.81e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;5.26e-09;9!UBERON:0000042;5.26e-09;9!UBERON:0002384;5.23e-08;198!UBERON:0002199;9.25e-08;46!UBERON:0002416;9.25e-08;46!UBERON:0004797;2.76e-07;4!UBERON:0000415;2.76e-07;4!UBERON:0007240;2.76e-07;4!UBERON:0005742;2.76e-07;4!UBERON:0005734;2.76e-07;4!UBERON:0004664;2.76e-07;4!UBERON:0004663;2.76e-07;4!UBERON:0003688;3.77e-07;6!UBERON:0002358;3.77e-07;6!UBERON:0003684;3.77e-07;6!UBERON:0001178;3.77e-07;6!UBERON:0002097;9.67e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.17e-10,46;UBERON:0002416,1.17e-10,46;UBERON:0002384,1.54e-10,371;UBERON:0002097,6.54e-09,41;UBERON:0000415,2.61e-07,4;UBERON:0007240,2.61e-07,4;UBERON:0005742,2.61e-07,4;UBERON:0005734,2.61e-07,4;UBERON:0004664,2.61e-07,4;UBERON:0004663,2.61e-07,4;UBERON:0003688,2.81e-07,6;UBERON:0002358,2.81e-07,6;UBERON:0003684,2.81e-07,6;UBERON:0001178,2.81e-07,6;UBERON:0004923,3.09e-07,66 | |||
|phase1_expression=1.2717486548939,4.92431204949261,2.53717927372748,6.00439790118782,0.893922188854576,6.97870819280295,2.53299878168311,0.631719873426831,0.261185628199839,0,0,0.436882744260345,0.263766978228454,0.618831764800233,1.98838425436749,0.672325146451775,1.20538905604795,0.730310090387373,1.46379839637152,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0.251085279189606,0.0764134057479513,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0,2.1686349143074,4.01070328508712,4.92478164466801,0.795285947051099,3.40644409211845,1.03988298880475,3.32594096193846,1.75669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.267899184852239,0,0,0,0,0,0,0,0,3.97577561356255,3.41902381494365,1.45650098894541,10.3261183469573,2.12801029319014,0.560677600142307,0,2.96001058100592,0.622422070799533,1.61652806483626,0.653847612453835,0.302714855289863,2.88087962239999,0,0.624320153660641,0.570471821544449,0.597794722207204,0.352303495931295,0.161872944368132,0.280901613404497,0,0.491337269247072,0.309977343527296,1.18800285728205,4.45080472701402,0,0,0.673344455816265,0.500474079487857,0,0.438977620880838,2.75839016219118,2.55404700141215,0.567160915800105,2.87023417102179,2.34913127700424,2.33125091275518,5.70173082560364,1.44273540933814,2.57640540045629,0.930584281657949,1.18143432568886,1.16924406193438,2.27190396819703,1.47279837827679,1.45481451136931,5.68015348026583,1.30977727695932,1.18692414617341,0,0,0,0,0,0,0,0,0,1.56449532329816,4.5026865673502,0,0.464367928031979,1.44375896333917,0.236613600079688,0.168584690078102,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,1.18157981336281,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.70445216541493,0.288732895522148,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0,0.387815147273333,0,0,0.26593811658487,1.04007436911366,0.257207374262142,0,0.532844358032199,1.14382394926518,3.7983512377401,0.823240336780769,0.325736184293735,1.77695974371273,0,0,0,0,0,0,0,2.15662369942424,1.14861935834114,0,3.04040744001916,1.02738161275192,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,1.2269149171914,0.500170521059677,0.271265023699736,1.87173775377726,6.60187258549499,1.10391690523754,0.937131319941706,0.902838299183157,0,1.03473071292505,1.32845119707087,0.737476674166813,1.04260337361699,0,0.686286847621712,0,0,0,0,3.32870879020994,1.81434175997808,0.744323423456331,1.99500565274481,5.61320188866147,2.69092213436972,1.53512174720011,4.82561763430822,5.93672265779964,1.54209693802656,2.13074070375753,0.492762936082855,1.55776328755086,0.813472649219715,0,0,0,0.114814448164607,0.910455840033585,1.04899531967539,0,0.15403067420883,0,0,0.105551628892876,0,0,0.431831832204279,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0.412164046590889,0,0,0,0,6.42735719376638,0.580024309752732,1.3864375540318,0.921022048356777,1.10269257987624,0.751941714077915,1.45016693914229,0.511359764496605,0.801288320820636,0,0,0,0,0,5.35180989612088,0.6970372701606,0.924100740528266,0.532306030317022,0.869932992075073,0.74129687641568,0,0,1.2655176988749,1.71567174531442,0,0.42793898803392,0.636406495851874,0,0.719489830333259,1.37268514868027,1.17812402345686,0.404364963146632,3.17020642346017,0.421258456238981,0,1.21856744815642,2.11300293513511,0.272999822815972,2.12108147930569,3.39024349860728,2.2054613741845,2.65375590096488,0.438450885253763,0,0.655894752046633,0.405820753925408,0.92947049429925,0.281695602532241,0.430234056612155,0.294747123039363,1.07001315444375,0,5.06658324714394,5.59801318031833,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,1.43246690842614,0.593929361665277,1.22864280839693,0,0,0.445234820091624,0.494411622680279,0,0.398495976502139,0.276283915531148,0,0.306806047506464,0,4.66559381492711,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.538651809526579,1.13942055847001,0,0,0,7.97502899329799,0.732780747214898,10.1276607443541,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,1.20990716048664,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0.484945082442097,0,0.677942222341597,0.137041924646751,0,0.126621591911757,0,0,0,0,0,0,0,0,0.124252535565433,0,0.135904206073614,1.04602846312333,0,0.288950589901519,0,0.136905378891993,0,0.429765441419957,0,0.837847203816763,0.687481272035051,0.717873024576814,0.599037001496973,0,0,0,1.44119953416961,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0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| ||
|short_description=p@chr15:48818401..48818413,- | |||
}} | }} |
Latest revision as of 02:09, 25 July 2015
Short description: | p@chr15:48818401..48818413, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:48818401..48818413, - |
Coexpression cluster: | C834_Fibroblast_Sertoli_chorionic_Smooth_Synoviocyte_Preadipocyte_normal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.85e-20 | 76 |
multi fate stem cell | 1.98e-14 | 427 |
somatic stem cell | 7.33e-14 | 433 |
stem cell | 3.94e-13 | 441 |
skin fibroblast | 4.55e-10 | 23 |
preadipocyte | 6.29e-10 | 12 |
connective tissue cell | 7.22e-10 | 361 |
mesenchymal cell | 1.74e-09 | 354 |
motile cell | 9.29e-08 | 386 |
fibroblast of tunica adventitia of artery | 2.61e-07 | 4 |
fibroblast of the aortic adventitia | 2.61e-07 | 4 |
GAG secreting cell | 6.06e-07 | 9 |
carbohydrate secreting cell | 6.06e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
integument | 1.17e-10 | 46 |
integumental system | 1.17e-10 | 46 |
connective tissue | 1.54e-10 | 371 |
skin of body | 6.54e-09 | 41 |
artery wall | 2.61e-07 | 4 |
tunica adventitia of artery | 2.61e-07 | 4 |
adventitia | 2.61e-07 | 4 |
tunica adventitia of blood vessel | 2.61e-07 | 4 |
aorta tunica adventitia | 2.61e-07 | 4 |
aorta wall | 2.61e-07 | 4 |
omentum | 2.81e-07 | 6 |
peritoneum | 2.81e-07 | 6 |
abdominal cavity | 2.81e-07 | 6 |
visceral peritoneum | 2.81e-07 | 6 |
organ component layer | 3.09e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.53e-08 | 5 |
myotonic disease | 1.53e-08 | 5 |
muscle tissue disease | 1.53e-08 | 5 |
myopathy | 1.53e-08 | 5 |
muscular disease | 1.53e-08 | 5 |
myotonic dystrophy | 1.53e-08 | 5 |