FFCP PHASE1:Hg19::chr15:68643106..68643126,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:68643106..68643126,- to FFCP PHASE1:Hg19::chr15:68643106..68643126,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22801 | |EntrezGene=22801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6136 | |HGNC=6136 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZX6 | |UniProt=F5GZX6 | ||
|association_with_transcript=-40bp_to_ENST00000535491_5end | |||
|cluster_id=chr15:68643106..68643126,- | |||
|coexpression_cluster_id=C240 | |||
|description=CAGE_peak_4_at_ITGA11_5end | |||
|id=chr15:68643106..68643126,- | |||
|ontology_enrichment_celltype=CL:0000057!8.68e-20!75;CL:0000055!8.79e-17!180;CL:0002620!6.22e-15!23;CL:0000048!1.55e-09!430;CL:0002320!3.91e-09!365;CL:0000723!4.41e-09!436;CL:0000034!1.68e-08!444;CL:0000134!6.75e-08!358;CL:0000219!8.06e-08!390;CL:0002334!9.96e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002579;1.30e-16;3!CL:0002615;1.98e-16;3!CL:0002334;3.09e-15;12!CL:0000136;6.58e-14;13!CL:0002617;2.50e-11;2!CL:0002580;4.41e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,1.49e-16,3;CL:0002615,2.26e-16,3;CL:0002334,2.77e-15,12;CL:0000136,6.99e-12,15;CL:0000057,8.71e-12,76;CL:0002617,4.08e-11,2;CL:0000134,9.52e-09,354;CL:0002320,1.91e-08,361;CL:0002580,4.06e-08,3;CL:0000048,1.91e-07,427;CL:0000219,2.20e-07,386;CL:0000723,3.05e-07,433;CL:0000034,5.56e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!4.95e-08!5;DOID:450!4.95e-08!5;DOID:66!4.95e-08!5;DOID:423!4.95e-08!5;DOID:0080000!4.95e-08!5;DOID:11722!4.95e-08!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!2.68e-11!6;UBERON:0002358!2.68e-11!6;UBERON:0003684!2.68e-11!6;UBERON:0001178!2.68e-11!6;UBERON:0002384!9.13e-10!375;UBERON:0002097!6.69e-09!40;UBERON:0004457!1.38e-08!12;UBERON:0000042!1.38e-08!12;UBERON:0002199!2.27e-07!45;UBERON:0002416!2.27e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.96e-31;6!UBERON:0002358;2.96e-31;6!UBERON:0003684;2.96e-31;6!UBERON:0001178;2.96e-31;6!UBERON:0004457;1.19e-20;9!UBERON:0000042;1.19e-20;9!UBERON:0005406;4.51e-11;2!UBERON:0000310;1.43e-08;10!UBERON:0001443;8.51e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.86e-31,6;UBERON:0002358,3.86e-31,6;UBERON:0003684,3.86e-31,6;UBERON:0001178,3.86e-31,6;UBERON:0004457,2.77e-15,12;UBERON:0000042,2.77e-15,12;UBERON:0005406,3.33e-11,2;UBERON:0002384,7.54e-09,371;UBERON:0000310,1.64e-08,10;UBERON:0001443,9.65e-08,11;UBERON:0004923,2.73e-07,66 | |||
|phase1_expression=1.09007027562334,9.63452357509424,1.26858963686374,16.0117277365009,8.93922188854576,2.61701557230111,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0.730310090387373,0.487932798790507,0,0.408001382488506,0.940364164434263,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,1.44846518960824,0,1.94653948121054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.633152558322899,0,2.58152958673932,0.354668382198357,0.560677600142307,0,2.22000793575444,0,0,0.163461903113459,0.302714855289863,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0,0,1.18800285728205,0.741800787835671,0,0,0,0,0,0,1.22595118319608,0.300476117813194,0,0.717558542755448,1.49490172172997,0.211931901159562,0.600182192168805,0.92747276314595,0.772921620136887,0.558350568994769,0.675105328965065,1.75386609290158,0.252433774244115,0.552299391853796,0.161646056818812,1.42003837006646,0.906768884048762,0.169560592310488,0,0,0,0,0,0,0,0,0,0,3.85944562915731,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.387815147273333,0,0,0.797814349754612,1.04007436911366,0,0,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0.099972991182057,0,0,0,1.19812427745791,4.59447743336456,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0,1.60586089917446,0.788512075169673,0.117141414992713,0,13.6444502433591,0,0,1.29058417979192,0.0868836144680828,0.195801157462741,0.686286847621712,0,0,0,0,0,0,0.992431231275107,2.91577749247319,19.084886421449,2.05022638809122,7.16390148693385,7.23842645146234,1.48418066444991,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21367859688319,0.096670718292122,0,0.15350367472613,0,0,0,0,0.267096106940212,0,0,0,0,0,1.25924938732256,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0.274537029736055,0.235624804691373,0,0,0.421258456238981,0,0.243713489631284,0,0,0.565621727814851,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0.844430541190656,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.996239941255349,0,0,0.102268682502155,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0.683652335082007,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.339936274560377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0.701139929541673,0,0.568209015825267,0.50313580350515,0,0,0.604923695052956,0,0,0,0,0.310525913752519,0,0.53168342911599,1.5652351854352,0.450772826991655,0,0,0.181848659202559,0.214821114084977,0,0.398095888698616,1.20008329398946,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63804924423206,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,3.3687002508852,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09194519983426,0.924351257262837,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0.426467963801962,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0.366724332548599,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=1.09007027562334,9.63452357509424,1.26858963686374,16.0117277365009,8.93922188854576,2.61701557230111,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0.730310090387373,0.487932798790507,0,0.408001382488506,0.940364164434263,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,1.44846518960824,0,1.94653948121054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.633152558322899,0,2.58152958673932,0.354668382198357,0.560677600142307,0,2.22000793575444,0,0,0.163461903113459,0.302714855289863,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0,0,1.18800285728205,0.741800787835671,0,0,0,0,0,0,1.22595118319608,0.300476117813194,0,0.717558542755448,1.49490172172997,0.211931901159562,0.600182192168805,0.92747276314595,0.772921620136887,0.558350568994769,0.675105328965065,1.75386609290158,0.252433774244115,0.552299391853796,0.161646056818812,1.42003837006646,0.906768884048762,0.169560592310488,0,0,0,0,0,0,0,0,0,0,3.85944562915731,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.387815147273333,0,0,0.797814349754612,1.04007436911366,0,0,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0.099972991182057,0,0,0,1.19812427745791,4.59447743336456,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0,1.60586089917446,0.788512075169673,0.117141414992713,0,13.6444502433591,0,0,1.29058417979192,0.0868836144680828,0.195801157462741,0.686286847621712,0,0,0,0,0,0,0.992431231275107,2.91577749247319,19.084886421449,2.05022638809122,7.16390148693385,7.23842645146234,1.48418066444991,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21367859688319,0.096670718292122,0,0.15350367472613,0,0,0,0,0.267096106940212,0,0,0,0,0,1.25924938732256,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0.274537029736055,0.235624804691373,0,0,0.421258456238981,0,0.243713489631284,0,0,0.565621727814851,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0.844430541190656,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.996239941255349,0,0,0.102268682502155,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0.683652335082007,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.339936274560377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0.701139929541673,0,0.568209015825267,0.50313580350515,0,0,0.604923695052956,0,0,0,0,0.310525913752519,0,0.53168342911599,1.5652351854352,0.450772826991655,0,0,0.181848659202559,0.214821114084977,0,0.398095888698616,1.20008329398946,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63804924423206,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,3.3687002508852,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09194519983426,0.924351257262837,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0.426467963801962,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0.366724332548599,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p4@ITGA11 | |||
}} | }} |
Latest revision as of 18:33, 18 September 2015
Short description: | p4@ITGA11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ITGA11_5end |
Coexpression cluster: | C240_Adipocyte_Preadipocyte_Osteoblast_Chondrocyte_tenocyte_Synoviocyte_mesenchymal |
Association with transcript: | -40bp_to_ENST00000535491_5end |
EntrezGene: | ITGA11 |
HGNC: | 6136 |
UniProt: | F5GZX6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 1.49e-16 | 3 |
adipocyte of omentum tissue | 2.26e-16 | 3 |
preadipocyte | 2.77e-15 | 12 |
fat cell | 6.99e-12 | 15 |
fibroblast | 8.71e-12 | 76 |
adipocyte of breast | 4.08e-11 | 2 |
mesenchymal cell | 9.52e-09 | 354 |
connective tissue cell | 1.91e-08 | 361 |
preadipocyte of the breast | 4.06e-08 | 3 |
multi fate stem cell | 1.91e-07 | 427 |
motile cell | 2.20e-07 | 386 |
somatic stem cell | 3.05e-07 | 433 |
stem cell | 5.56e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.86e-31 | 6 |
peritoneum | 3.86e-31 | 6 |
abdominal cavity | 3.86e-31 | 6 |
visceral peritoneum | 3.86e-31 | 6 |
cavity lining | 2.77e-15 | 12 |
serous membrane | 2.77e-15 | 12 |
perirenal fat | 3.33e-11 | 2 |
connective tissue | 7.54e-09 | 371 |
breast | 1.64e-08 | 10 |
chest | 9.65e-08 | 11 |
organ component layer | 2.73e-07 | 66 |