FFCP PHASE1:Hg19::chr16:30064413..30064428,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:30064413..30064428,+ to FFCP PHASE1:Hg19::chr16:30064413..30064428,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=226 | |EntrezGene=226 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=414 | |HGNC=414 | ||
|TSSclassifier=strong | |||
|UniProt=P04075 | |UniProt=P04075 | ||
|association_with_transcript=2bp_to_NM_000034_5end | |||
|cluster_id=chr16:30064413..30064428,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_32_at_ALDOA_5end | |||
|id=chr16:30064413..30064428,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002592;1.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,1.21e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.74e-12;2!UBERON:0009117;6.20e-10;10!UBERON:0005564;6.20e-10;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3193;2.74e-12;2!DOID:962;2.74e-12;2!DOID:1192;1.26e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,3.62e-12,2;DOID:962,3.62e-12,2;DOID:1192,1.51e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.73e-15!57;UBERON:0005068!4.73e-15!57;UBERON:0006241!4.73e-15!57;UBERON:0007135!4.73e-15!57;UBERON:0000955!5.21e-15!69;UBERON:0006238!5.21e-15!69;UBERON:0001017!5.72e-15!82;UBERON:0005743!9.54e-14!86;UBERON:0000073!4.25e-13!94;UBERON:0001016!4.25e-13!94;UBERON:0002616!1.12e-11!59;UBERON:0003076!2.82e-11!15;UBERON:0003057!2.82e-11!15;UBERON:0007023!4.29e-10!115;UBERON:0002346!1.04e-09!90;UBERON:0003075!4.19e-09!86;UBERON:0007284!4.19e-09!86;UBERON:0000153!8.72e-09!129;UBERON:0007811!8.72e-09!129;UBERON:0000033!1.14e-08!123;UBERON:0002020!6.93e-08!34;UBERON:0003528!6.93e-08!34;UBERON:0004733!7.04e-08!12;UBERON:0002028!7.04e-08!12;UBERON:0007277!7.04e-08!12;UBERON:0001893!9.31e-08!34;UBERON:0002780!1.60e-07!41;UBERON:0001890!1.60e-07!41;UBERON:0006240!1.60e-07!41;UBERON:0001869!1.86e-07!32;UBERON:0000475!1.90e-07!365;UBERON:0000025!1.97e-07!194;UBERON:0003080!3.15e-07!42;UBERON:0002791!3.48e-07!33;UBERON:0004732!4.09e-07!13;UBERON:0000924!6.43e-07!173;UBERON:0006601!6.43e-07!173;UBERON:0002308!7.72e-07!9;UBERON:0000125!7.72e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001873;2.74e-12;2!UBERON:0003714;2.74e-12;2!UBERON:0000473;3.54e-12;8!UBERON:0003135;4.08e-09;11!UBERON:0001896;1.26e-08;3!UBERON:0003498;1.26e-08;3!UBERON:0005985;1.26e-08;3!UBERON:0001621;1.26e-08;3!UBERON:0005383;1.26e-08;3!UBERON:0005290;1.26e-08;3!UBERON:0005382;1.26e-08;3!UBERON:0000369;8.85e-07;4!UBERON:0002435;8.85e-07;4!UBERON:0000204;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001873,2.32e-12,2;UBERON:0010122,2.32e-12,2;UBERON:0000473,3.54e-12,8;UBERON:0003714,3.62e-12,2;UBERON:0003135,4.08e-09,11;UBERON:0005383,1.12e-08,3;UBERON:0005382,1.12e-08,3;UBERON:0001621,1.21e-08,3;UBERON:0001896,1.40e-08,3;UBERON:0005290,1.40e-08,3;UBERON:0010096,1.40e-08,3;UBERON:0000369,8.14e-07,4;UBERON:0002435,8.14e-07,4;UBERON:0000204,8.14e-07,4;UBERON:0010082,8.14e-07,4 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.0945348171640679,0,0,1.44076983047484,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.264818361626438,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0.206105058476878,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0.325808305310325,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.256278298511402,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0,0.274537029736055,0.235624804691373,0,1.58510321173008,0,0,0,0,0,0,0,0.551365343546124,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0.228234679033192,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0.63337622438398,0.19924798825107,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0.278304294485554,1.99613798001194,0,0,0,0,0,0,0,0.291604613383254,0.520874984799877,1.77148277162768,0.723578631752448,0,0.110579259931225,0.295547618953547,0,0.10893846351899,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0.216388639742091,0,0,0,0,0.123563938946503,0.104421949505455,0.202203398942031,0.802577647298789,0.234264445725339,0,0.19566461893209,0,0,0,0.61214552326098,0,0.300646838828985,0,0,0,0,0,0.284609546029793,0.277349346026277,0.173559738335131,0,0,0.17472666824203,0.343972064943233,0,0,0,0,0,0,0,0,0.316553979779393,0,0.0801588202515337,0.213452994739353,0.19980960958213,0,0,0.343189995723929,0,0,0.235694034616795,0.135904206073614,0.209205692624666,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.364497339948148,0,0.157611414598396,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,1.14681839138014,0.443716206147409,0.248385611765534,0,0.124980407962107,0,0,0,0.468334905806882,0.579684114443301,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0.212574920101683,0,1.11728983594649,0,0,0.80057074828547,0.705351887381368,0,0.256916900385838,0,0,0.41023272848151,0,0.207471757392654,0.807378228159255,0,0.0981477185010256,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.339848664884159,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0.0852134047591577,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0.4226557275834,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0.743990036333503,0.462175628631418,0,0,0,0,0,0,0,0,4.47094319487613,7.502995644373,0,0.310298987585686,0,0,0.129177819672012,0.0620747142958579,0,0.190941474834495,0.202117188958219,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.0945348171640679,0,0,1.44076983047484,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.264818361626438,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0.206105058476878,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0.325808305310325,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.256278298511402,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0,0.274537029736055,0.235624804691373,0,1.58510321173008,0,0,0,0,0,0,0,0.551365343546124,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0.228234679033192,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0.63337622438398,0.19924798825107,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0.278304294485554,1.99613798001194,0,0,0,0,0,0,0,0.291604613383254,0.520874984799877,1.77148277162768,0.723578631752448,0,0.110579259931225,0.295547618953547,0,0.10893846351899,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0.216388639742091,0,0,0,0,0.123563938946503,0.104421949505455,0.202203398942031,0.802577647298789,0.234264445725339,0,0.19566461893209,0,0,0,0.61214552326098,0,0.300646838828985,0,0,0,0,0,0.284609546029793,0.277349346026277,0.173559738335131,0,0,0.17472666824203,0.343972064943233,0,0,0,0,0,0,0,0,0.316553979779393,0,0.0801588202515337,0.213452994739353,0.19980960958213,0,0,0.343189995723929,0,0,0.235694034616795,0.135904206073614,0.209205692624666,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.364497339948148,0,0.157611414598396,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,1.14681839138014,0.443716206147409,0.248385611765534,0,0.124980407962107,0,0,0,0.468334905806882,0.579684114443301,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0.212574920101683,0,1.11728983594649,0,0,0.80057074828547,0.705351887381368,0,0.256916900385838,0,0,0.41023272848151,0,0.207471757392654,0.807378228159255,0,0.0981477185010256,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.339848664884159,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0.0852134047591577,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0.4226557275834,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0.743990036333503,0.462175628631418,0,0,0,0,0,0,0,0,4.47094319487613,7.502995644373,0,0.310298987585686,0,0,0.129177819672012,0.0620747142958579,0,0.190941474834495,0.202117188958219,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p32@ALDOA | |||
}} | }} |
Latest revision as of 05:51, 16 September 2015
Short description: | p32@ALDOA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_32_at_ALDOA_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 2bp_to_NM_000034_5end |
EntrezGene: | ALDOA |
HGNC: | 414 |
UniProt: | P04075 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 1.21e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 2.32e-12 | 2 |
future caudate nucleus | 2.32e-12 | 2 |
testis | 3.54e-12 | 8 |
neural tissue | 3.62e-12 | 2 |
male reproductive organ | 4.08e-09 | 11 |
caudate-putamen | 1.12e-08 | 3 |
dorsal striatum | 1.12e-08 | 3 |
coronary artery | 1.21e-08 | 3 |
medulla oblongata | 1.40e-08 | 3 |
myelencephalon | 1.40e-08 | 3 |
future myelencephalon | 1.40e-08 | 3 |
corpus striatum | 8.14e-07 | 4 |
striatum | 8.14e-07 | 4 |
ventral part of telencephalon | 8.14e-07 | 4 |
future corpus striatum | 8.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 3.62e-12 | 2 |
neurofibroma | 3.62e-12 | 2 |
peripheral nervous system neoplasm | 1.51e-08 | 3 |