FFCP PHASE1:Hg19::chr16:53164906..53164953,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:53164906..53164953,+ to FFCP PHASE1:Hg19::chr16:53164906..53164953,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80205 | |EntrezGene=80205 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25701 | |HGNC=25701 | ||
|TSSclassifier=strong | |||
|UniProt=Q3L8U1 | |UniProt=Q3L8U1 | ||
|association_with_transcript=73bp_to_DQ333316_5end | |||
|cluster_id=chr16:53164906..53164953,+ | |||
|description=CAGE_peak_2_at_CHD9_5end | |||
|id=chr16:53164906..53164953,+ | |||
|ontology_enrichment_celltype=CL:0002031!1.04e-12!124;CL:0000738!3.92e-11!140;CL:0002087!4.06e-11!119;CL:0002057!5.49e-09!42;CL:0000860!2.53e-07!45;CL:0000557!2.69e-07!71;CL:0000839!5.15e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.21e-09;33!CL:0002057;6.21e-09;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.08e-13,120;CL:0002087,4.94e-12,115;CL:0000738,5.76e-12,136;CL:0000860,5.48e-09,42;CL:0002057,5.48e-09,42;CL:0000557,3.01e-08,67;CL:0000839,6.03e-08,66;CL:0000037,7.00e-07,168;CL:0002032,9.26e-07,161;CL:0000837,9.26e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;8.28e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.29e-24!115;UBERON:0001049!1.58e-10!57;UBERON:0005068!1.58e-10!57;UBERON:0006241!1.58e-10!57;UBERON:0007135!1.58e-10!57;UBERON:0002616!3.99e-09!59;UBERON:0003080!8.37e-09!42;UBERON:0002390!1.16e-08!102;UBERON:0003061!1.16e-08!102;UBERON:0000955!1.21e-08!69;UBERON:0006238!1.21e-08!69;UBERON:0002780!1.34e-08!41;UBERON:0001890!1.34e-08!41;UBERON:0006240!1.34e-08!41;UBERON:0001017!5.04e-08!82;UBERON:0002193!8.28e-08!112;UBERON:0002020!3.40e-07!34;UBERON:0003528!3.40e-07!34;UBERON:0005743!7.87e-07!86;UBERON:0001893!9.93e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.94e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.08e-23,114;UBERON:0001049,2.54e-10,56;UBERON:0005068,2.54e-10,56;UBERON:0006241,2.54e-10,56;UBERON:0007135,2.54e-10,56;UBERON:0002390,1.67e-09,98;UBERON:0003061,1.67e-09,98;UBERON:0000073,1.87e-09,53;UBERON:0002616,1.87e-09,53;UBERON:0002780,1.34e-08,41;UBERON:0001890,1.34e-08,41;UBERON:0003080,1.34e-08,41;UBERON:0006240,1.34e-08,41;UBERON:0002193,1.56e-08,108;UBERON:0000955,1.89e-08,68;UBERON:0006238,1.89e-08,68;UBERON:0001017,7.88e-08,81;UBERON:0003528,3.39e-07,34;UBERON:0002020,3.39e-07,34;UBERON:0001016,5.14e-07,89;UBERON:0001474,7.29e-07,82;UBERON:0001893,9.92e-07,34 | |||
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| ||
|short_description=p2@CHD9 | |||
}} | }} |
Latest revision as of 22:26, 16 September 2015
Short description: | p2@CHD9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CHD9_5end |
Coexpression cluster: | NA |
Association with transcript: | 73bp_to_DQ333316_5end |
EntrezGene: | CHD9 |
HGNC: | 25701 |
UniProt: | Q3L8U1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.08e-13 | 120 |
nongranular leukocyte | 4.94e-12 | 115 |
leukocyte | 5.76e-12 | 136 |
classical monocyte | 5.48e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.48e-09 | 42 |
granulocyte monocyte progenitor cell | 3.01e-08 | 67 |
myeloid lineage restricted progenitor cell | 6.03e-08 | 66 |
hematopoietic stem cell | 7.00e-07 | 168 |
hematopoietic oligopotent progenitor cell | 9.26e-07 | 161 |
hematopoietic multipotent progenitor cell | 9.26e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.08e-23 | 114 |
neural tube | 2.54e-10 | 56 |
neural rod | 2.54e-10 | 56 |
future spinal cord | 2.54e-10 | 56 |
neural keel | 2.54e-10 | 56 |
hematopoietic system | 1.67e-09 | 98 |
blood island | 1.67e-09 | 98 |
regional part of nervous system | 1.87e-09 | 53 |
regional part of brain | 1.87e-09 | 53 |
regional part of forebrain | 1.34e-08 | 41 |
forebrain | 1.34e-08 | 41 |
anterior neural tube | 1.34e-08 | 41 |
future forebrain | 1.34e-08 | 41 |
hemolymphoid system | 1.56e-08 | 108 |
brain | 1.89e-08 | 68 |
future brain | 1.89e-08 | 68 |
central nervous system | 7.88e-08 | 81 |
brain grey matter | 3.39e-07 | 34 |
gray matter | 3.39e-07 | 34 |
nervous system | 5.14e-07 | 89 |
bone element | 7.29e-07 | 82 |
telencephalon | 9.92e-07 | 34 |