FFCP PHASE1:Hg19::chr17:46115122..46115173,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:46115122..46115173,- to FFCP PHASE1:Hg19::chr17:46115122..46115173,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51226 | |EntrezGene=51226 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19356 | |HGNC=19356 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P299 | |UniProt=Q9P299 | ||
|association_with_transcript=0bp_to_ENST00000006101,NM_016429,uc002imy.2_5end | |||
|cluster_id=chr17:46115122..46115173,- | |||
|coexpression_cluster_id=C589 | |||
|description=CAGE_peak_1_at_COPZ2_5end | |||
|id=chr17:46115122..46115173,- | |||
|ontology_enrichment_celltype=CL:0000055!1.20e-32!180;CL:0000057!1.74e-19!75;CL:0000680!1.07e-18!57;CL:0000056!1.07e-18!57;CL:0000355!1.07e-18!57;CL:0000183!1.98e-18!59;CL:0000187!8.21e-18!54;CL:0000192!8.34e-17!42;CL:0000514!8.34e-17!42;CL:0000359!1.40e-13!32;CL:0000222!7.67e-13!119;CL:0000393!9.87e-13!60;CL:0000211!9.87e-13!60;CL:0000136!1.80e-09!15;CL:0002334!3.77e-07!12;CL:0002620!4.34e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.32e-13;32!CL:0000192;2.11e-12;43!CL:0000187;4.62e-10;55!CL:0000057;2.50e-08;73!CL:0000136;2.74e-08;13!CL:0000134;5.86e-08;55!CL:0002320;3.08e-07;188!CL:0002334;3.50e-07;12!CL:0002620;4.19e-07;23!CL:0000393;4.56e-07;61!CL:0000211;4.56e-07;61!CL:0000048;8.57e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.78e-20,76;CL:0000680,6.04e-19,58;CL:0000056,6.04e-19,58;CL:0000355,6.04e-19,58;CL:0000187,4.68e-18,55;CL:0000192,5.05e-17,43;CL:0000514,5.05e-17,43;CL:0000359,1.23e-13,32;CL:0000222,5.46e-13,121;CL:0000393,7.15e-13,61;CL:0000211,7.15e-13,61;CL:0000136,1.66e-09,15;CL:0002334,3.55e-07,12;CL:0002620,4.09e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;2.11e-12;43!CL:0000355;3.62e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.01e-24!83;UBERON:0002329!8.01e-24!83;UBERON:0003077!8.01e-24!83;UBERON:0003059!8.01e-24!83;UBERON:0007282!8.01e-24!83;UBERON:0009618!8.01e-24!83;UBERON:0007285!8.01e-24!83;UBERON:0004290!9.92e-22!70;UBERON:0000486!1.62e-20!82;UBERON:0001134!5.19e-20!61;UBERON:0002036!5.19e-20!61;UBERON:0003082!5.19e-20!61;UBERON:0002385!9.53e-20!63;UBERON:0001015!9.53e-20!63;UBERON:0000383!9.53e-20!63;UBERON:0005256!4.99e-17!143;UBERON:0004872!6.69e-14!84;UBERON:0000475!2.36e-12!365;UBERON:0002049!6.59e-12!79;UBERON:0007798!6.59e-12!79;UBERON:0001637!1.24e-11!42;UBERON:0003509!1.24e-11!42;UBERON:0004572!1.24e-11!42;UBERON:0003102!2.35e-11!95;UBERON:0002100!4.70e-11!216;UBERON:0000490!5.92e-11!138;UBERON:0001981!8.62e-11!60;UBERON:0007500!8.62e-11!60;UBERON:0004537!8.62e-11!60;UBERON:0006965!8.62e-11!60;UBERON:0004573!2.08e-10!33;UBERON:0004571!2.08e-10!33;UBERON:0000055!2.10e-10!69;UBERON:0000468!2.74e-10!659;UBERON:0001009!3.97e-10!113;UBERON:0004535!1.33e-09!110;UBERON:0003914!2.26e-09!118;UBERON:0000481!3.65e-09!347;UBERON:0003104!1.15e-08!238;UBERON:0009142!1.15e-08!238;UBERON:0002199!1.50e-08!45;UBERON:0002416!1.50e-08!45;UBERON:0000467!1.67e-08!625;UBERON:0000480!2.26e-08!626;UBERON:0000119!6.34e-08!312;UBERON:0000483!7.12e-08!309;UBERON:0001013!3.66e-07!14;UBERON:0000926!4.71e-07!448;UBERON:0004120!4.71e-07!448;UBERON:0006603!4.71e-07!448;UBERON:0007100!6.81e-07!27;UBERON:0000477!7.57e-07!286;UBERON:0002097!9.05e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.17e-09;33!UBERON:0004571;3.17e-09;33!UBERON:0001637;4.10e-08;42!UBERON:0003509;4.10e-08;42!UBERON:0004572;4.10e-08;42!UBERON:0002385;5.72e-08;31!UBERON:0001015;5.72e-08;31!UBERON:0000383;5.72e-08;31!UBERON:0002384;1.06e-07;198!UBERON:0001013;3.40e-07;14 | |||
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| ||
|short_description=p1@COPZ2 | |||
}} | }} |
Latest revision as of 05:02, 25 September 2015
Short description: | p1@COPZ2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COPZ2_5end |
Coexpression cluster: | C589_Mesenchymal_Smooth_Fibroblast_Osteoblast_tenocyte_Preadipocyte_Synoviocyte |
Association with transcript: | 0bp_to_ENST00000006101, NM_016429, uc002imy.2_5end |
EntrezGene: | COPZ2 |
HGNC: | 19356 |
UniProt: | Q9P299 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.78e-20 | 76 |
muscle precursor cell | 6.04e-19 | 58 |
myoblast | 6.04e-19 | 58 |
multi-potent skeletal muscle stem cell | 6.04e-19 | 58 |
muscle cell | 4.68e-18 | 55 |
smooth muscle cell | 5.05e-17 | 43 |
smooth muscle myoblast | 5.05e-17 | 43 |
vascular associated smooth muscle cell | 1.23e-13 | 32 |
mesodermal cell | 5.46e-13 | 121 |
electrically responsive cell | 7.15e-13 | 61 |
electrically active cell | 7.15e-13 | 61 |
fat cell | 1.66e-09 | 15 |
preadipocyte | 3.55e-07 | 12 |
skin fibroblast | 4.09e-07 | 23 |