FFCP PHASE1:Hg19::chr17:47439568..47439641,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:47439568..47439641,- to FFCP PHASE1:Hg19::chr17:47439568..47439641,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22834 | |EntrezGene=22834 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29147 | |HGNC=29147 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2D9 | |UniProt=Q9Y2D9 | ||
|association_with_transcript=-90bp_to_ENST00000430262_5end | |||
|cluster_id=chr17:47439568..47439641,- | |||
|coexpression_cluster_id=C468 | |||
|description=CAGE_peak_2_at_ZNF652_5end | |||
|id=chr17:47439568..47439641,- | |||
|ontology_enrichment_celltype=CL:0000738!1.24e-15!140;CL:0002087!1.97e-13!119;CL:0000838!6.45e-11!52;CL:0000542!8.45e-11!53;CL:0000051!8.45e-11!53;CL:0002031!1.13e-10!124;CL:0000037!8.58e-10!172;CL:0000566!8.58e-10!172;CL:0002032!1.57e-08!165;CL:0000837!1.57e-08!165;CL:0000791!2.39e-08!18;CL:0000789!2.39e-08!18;CL:0002420!2.39e-08!18;CL:0002419!2.39e-08!18;CL:0000790!2.39e-08!18;CL:0000988!1.33e-07!182;CL:0000236!7.21e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.92e-08;18!CL:0000789;1.92e-08;18!CL:0002419;1.92e-08;18!CL:0000236;1.79e-07;13!CL:0000542;3.05e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.59e-16,136;CL:0002087,7.19e-14,115;CL:0002031,5.23e-11,120;CL:0000838,6.70e-11,52;CL:0000542,8.77e-11,53;CL:0000051,8.77e-11,53;CL:0000037,5.19e-10,168;CL:0002032,9.90e-09,161;CL:0000837,9.90e-09,161;CL:0000791,2.39e-08,18;CL:0000789,2.39e-08,18;CL:0002420,2.39e-08,18;CL:0002419,2.39e-08,18;CL:0000790,2.39e-08,18;CL:0000988,4.75e-08,177;CL:0000236,7.20e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;1.92e-08;18!CL:0000051;3.05e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.74e-32!115;UBERON:0001049!1.73e-11!57;UBERON:0005068!1.73e-11!57;UBERON:0006241!1.73e-11!57;UBERON:0007135!1.73e-11!57;UBERON:0001017!2.67e-11!82;UBERON:0005743!2.03e-10!86;UBERON:0000073!2.76e-10!94;UBERON:0001016!2.76e-10!94;UBERON:0003080!5.75e-10!42;UBERON:0002780!6.75e-10!41;UBERON:0001890!6.75e-10!41;UBERON:0006240!6.75e-10!41;UBERON:0000955!1.81e-09!69;UBERON:0006238!1.81e-09!69;UBERON:0002616!2.63e-09!59;UBERON:0002020!2.63e-08!34;UBERON:0003528!2.63e-08!34;UBERON:0001893!2.82e-08!34;UBERON:0002791!6.71e-08!33;UBERON:0001869!1.63e-07!32;UBERON:0002619!1.69e-07!22;UBERON:0001950!2.52e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;6.69e-09;114!UBERON:0002780;1.52e-07;41!UBERON:0001890;1.52e-07;41!UBERON:0002619;2.33e-07;22!UBERON:0001950;2.92e-07;20!UBERON:0000073;4.84e-07;53!UBERON:0002616;4.84e-07;53!UBERON:0001893;6.71e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.10e-32,114;UBERON:0001049,2.08e-11,56;UBERON:0005068,2.08e-11,56;UBERON:0006241,2.08e-11,56;UBERON:0007135,2.08e-11,56;UBERON:0001017,3.33e-11,81;UBERON:0001016,5.39e-11,89;UBERON:0000073,2.31e-10,53;UBERON:0002616,2.31e-10,53;UBERON:0002780,6.73e-10,41;UBERON:0001890,6.73e-10,41;UBERON:0003080,6.73e-10,41;UBERON:0006240,6.73e-10,41;UBERON:0000955,2.24e-09,68;UBERON:0006238,2.24e-09,68;UBERON:0003528,2.62e-08,34;UBERON:0002020,2.62e-08,34;UBERON:0001893,2.81e-08,34;UBERON:0001869,1.63e-07,32;UBERON:0002619,1.69e-07,22;UBERON:0002791,1.84e-07,32;UBERON:0001950,2.51e-07,20 | |||
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| ||
|short_description=p2@ZNF652 | |||
}} | }} |
Latest revision as of 20:54, 15 September 2015
Short description: | p2@ZNF652 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZNF652_5end |
Coexpression cluster: | C468_Neutrophils_Eosinophils_cerebellum_occipital_Whole_temporal_parietal |
Association with transcript: | -90bp_to_ENST00000430262_5end |
EntrezGene: | ZNF652 |
HGNC: | 29147 |
UniProt: | Q9Y2D9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.59e-16 | 136 |
nongranular leukocyte | 7.19e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 5.23e-11 | 120 |
lymphoid lineage restricted progenitor cell | 6.70e-11 | 52 |
lymphocyte | 8.77e-11 | 53 |
common lymphoid progenitor | 8.77e-11 | 53 |
hematopoietic stem cell | 5.19e-10 | 168 |
hematopoietic oligopotent progenitor cell | 9.90e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.90e-09 | 161 |
mature alpha-beta T cell | 2.39e-08 | 18 |
alpha-beta T cell | 2.39e-08 | 18 |
immature T cell | 2.39e-08 | 18 |
mature T cell | 2.39e-08 | 18 |
immature alpha-beta T cell | 2.39e-08 | 18 |
hematopoietic cell | 4.75e-08 | 177 |
B cell | 7.20e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.10e-32 | 114 |
neural tube | 2.08e-11 | 56 |
neural rod | 2.08e-11 | 56 |
future spinal cord | 2.08e-11 | 56 |
neural keel | 2.08e-11 | 56 |
central nervous system | 3.33e-11 | 81 |
nervous system | 5.39e-11 | 89 |
regional part of nervous system | 2.31e-10 | 53 |
regional part of brain | 2.31e-10 | 53 |
regional part of forebrain | 6.73e-10 | 41 |
forebrain | 6.73e-10 | 41 |
anterior neural tube | 6.73e-10 | 41 |
future forebrain | 6.73e-10 | 41 |
brain | 2.24e-09 | 68 |
future brain | 2.24e-09 | 68 |
brain grey matter | 2.62e-08 | 34 |
gray matter | 2.62e-08 | 34 |
telencephalon | 2.81e-08 | 34 |
cerebral hemisphere | 1.63e-07 | 32 |
regional part of cerebral cortex | 1.69e-07 | 22 |
regional part of telencephalon | 1.84e-07 | 32 |
neocortex | 2.51e-07 | 20 |