FFCP PHASE1:Hg19::chr17:64298521..64298534,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:64298521..64298534,+ to FFCP PHASE1:Hg19::chr17:64298521..64298534,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5578 | |EntrezGene=5578 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9393 | |HGNC=9393 | ||
|TSSclassifier=strong | |||
|UniProt=B5BU22,P17252,Q7Z727,Q59FI5 | |UniProt=B5BU22,P17252,Q7Z727,Q59FI5 | ||
|association_with_transcript=-391bp_to_NM_002737,uc002jfo.1,uc002jfp.1_5end | |||
|cluster_id=chr17:64298521..64298534,+ | |||
|description=CAGE_peak_5_at_PRKCA_5end | |||
|id=chr17:64298521..64298534,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.38e-10!180;CL:0000057!3.19e-09!75 | |||
|ontology_enrichment_celltype_v019=CL:0000737;1.20e-16;4!CL:0000746;1.16e-10;3!CL:0002174;3.32e-08;1!CL:0000228;3.32e-08;1!CL:0002372;3.32e-08;1!CL:0002591;3.32e-08;1!CL:0000501;3.32e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000737,1.03e-16,4;CL:0000746,1.16e-10,3;CL:0000513,1.16e-10,3;CL:0000228,2.69e-08,1;CL:0002372,2.69e-08,1;CL:0002174,3.33e-08,1;CL:0000501,3.33e-08,1;CL:0002591,5.07e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000513;1.16e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.34e-11!94;UBERON:0001016!5.34e-11!94;UBERON:0001017!8.36e-11!82;UBERON:0005743!3.73e-10!86;UBERON:0002616!9.59e-09!59;UBERON:0000955!1.09e-08!69;UBERON:0006238!1.09e-08!69;UBERON:0001049!1.62e-08!57;UBERON:0005068!1.62e-08!57;UBERON:0006241!1.62e-08!57;UBERON:0007135!1.62e-08!57;UBERON:0002780!5.70e-07!41;UBERON:0001890!5.70e-07!41;UBERON:0006240!5.70e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;3.32e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,3.57e-08,1 | |||
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| ||
|short_description=p5@PRKCA | |||
}} | }} |
Latest revision as of 21:15, 16 September 2015
Short description: | p5@PRKCA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PRKCA_5end |
Coexpression cluster: | NA |
Association with transcript: | -391bp_to_NM_002737, uc002jfo.1, uc002jfp.1_5end |
EntrezGene: | PRKCA |
HGNC: | 9393 |
UniProt: | B5BU22P17252Q7Z727Q59FI5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striated muscle cell | 1.03e-16 | 4 |
cardiac muscle cell | 1.16e-10 | 3 |
cardiac muscle myoblast | 1.16e-10 | 3 |
multinucleate cell | 2.69e-08 | 1 |
myotube | 2.69e-08 | 1 |
follicular cell of ovary | 3.33e-08 | 1 |
granulosa cell | 3.33e-08 | 1 |
smooth muscle cell of the pulmonary artery | 5.07e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
uterus or analog | 3.57e-08 | 1 |