FFCP PHASE1:Hg19::chr18:47340651..47340714,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:47340651..47340714,- to FFCP PHASE1:Hg19::chr18:47340651..47340714,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10449 | |EntrezGene=10449 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=83 | |HGNC=83 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-368bp_to_uc002ldx.3_5end | |||
|cluster_id=chr18:47340651..47340714,- | |||
|coexpression_cluster_id=C2461 | |||
|description=CAGE_peak_5_at_ACAA2_5end | |||
|id=chr18:47340651..47340714,- | |||
|ontology_enrichment_celltype=CL:0000791!1.41e-12!18;CL:0000789!1.41e-12!18;CL:0002420!1.41e-12!18;CL:0002419!1.41e-12!18;CL:0000790!1.41e-12!18;CL:0000084!5.82e-09!25;CL:0000827!5.82e-09!25;CL:0000625!1.65e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.99e-13;18!CL:0000789;1.99e-13;18!CL:0002419;1.99e-13;18!CL:0000084;6.22e-10;25!CL:0000625;4.85e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.35e-13,18;CL:0000789,3.35e-13,18;CL:0002420,3.35e-13,18;CL:0002419,3.35e-13,18;CL:0000790,3.35e-13,18;CL:0000084,1.39e-09,25;CL:0000827,1.39e-09,25;CL:0000625,6.67e-09,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.99e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.15e-07,15;UBERON:0000179,6.15e-07,15;UBERON:0000463,6.15e-07,15 | |||
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| ||
|short_description=p5@ACAA2 | |||
}} | }} |
Latest revision as of 18:01, 19 September 2015
Short description: | p5@ACAA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ACAA2_5end |
Coexpression cluster: | C2461_CD8_CD4_Natural_Basophils_CD34_Mesenchymal_uterus |
Association with transcript: | -368bp_to_uc002ldx.3_5end |
EntrezGene: | ACAA2 |
HGNC: | 83 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.35e-13 | 18 |
alpha-beta T cell | 3.35e-13 | 18 |
immature T cell | 3.35e-13 | 18 |
mature T cell | 3.35e-13 | 18 |
immature alpha-beta T cell | 3.35e-13 | 18 |
T cell | 1.39e-09 | 25 |
pro-T cell | 1.39e-09 | 25 |
CD8-positive, alpha-beta T cell | 6.67e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
blood | 6.15e-07 | 15 |
haemolymphatic fluid | 6.15e-07 | 15 |
organism substance | 6.15e-07 | 15 |