FFCP PHASE1:Hg19::chr18:53253297..53253322,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:53253297..53253322,- to FFCP PHASE1:Hg19::chr18:53253297..53253322,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6925 | |EntrezGene=6925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |HGNC=11634 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z6Y1 | |UniProt=B7Z6Y1 | ||
|association_with_transcript=13bp_to_ENST00000540999,uc010xdx.1_5end | |||
|cluster_id=chr18:53253297..53253322,- | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_30_at_TCF4_5end | |||
|id=chr18:53253297..53253322,- | |||
|ontology_enrichment_celltype=CL:0000047!5.27e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000784;2.63e-18;3!CL:0000540;1.20e-08;6!CL:0000404;1.20e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,2.64e-18,3;CL:0000047,3.30e-11,8;CL:0000540,1.01e-08,6;CL:0000031,1.01e-08,6;CL:0000404,1.01e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000031;1.20e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;4.42e-07;1!DOID:1357;4.42e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,4.43e-07,1;DOID:1357,4.43e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.12e-25!115;UBERON:0001017!2.97e-23!82;UBERON:0000073!2.83e-22!94;UBERON:0001016!2.83e-22!94;UBERON:0005743!3.78e-22!86;UBERON:0001049!1.11e-19!57;UBERON:0005068!1.11e-19!57;UBERON:0006241!1.11e-19!57;UBERON:0007135!1.11e-19!57;UBERON:0001869!7.75e-19!32;UBERON:0003080!1.88e-18!42;UBERON:0001893!2.57e-18!34;UBERON:0002020!2.71e-18!34;UBERON:0003528!2.71e-18!34;UBERON:0002780!1.53e-17!41;UBERON:0001890!1.53e-17!41;UBERON:0006240!1.53e-17!41;UBERON:0002791!1.86e-17!33;UBERON:0000956!6.66e-17!25;UBERON:0000203!6.66e-17!25;UBERON:0000955!2.93e-16!69;UBERON:0006238!2.93e-16!69;UBERON:0002616!3.92e-16!59;UBERON:0002619!2.63e-15!22;UBERON:0003075!1.16e-14!86;UBERON:0007284!1.16e-14!86;UBERON:0001950!1.11e-13!20;UBERON:0002346!2.50e-13!90;UBERON:0004121!1.83e-11!169;UBERON:0003056!2.08e-11!61;UBERON:0000924!9.73e-11!173;UBERON:0006601!9.73e-11!173;UBERON:0000153!6.35e-09!129;UBERON:0007811!6.35e-09!129;UBERON:0000033!1.09e-08!123;UBERON:0004111!4.66e-07!241;UBERON:0001871!5.78e-07!7;UBERON:0000025!9.41e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;6.09e-09;20!UBERON:0002619;4.11e-08;22!UBERON:0000956;4.16e-07;25!UBERON:0000203;4.16e-07;25!UBERON:0001764;4.42e-07;1!UBERON:0001825;4.42e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,5.76e-09,20;UBERON:0002619,3.91e-08,22;UBERON:0000956,3.98e-07,25;UBERON:0000203,3.98e-07,25;UBERON:0001764,4.43e-07,1;UBERON:0001825,4.43e-07,1 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0.286235987131057,0.136874425072884,0.502170558379211,0,0,0,0,0.767658796194425,1.08371286321253,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.383959833463255,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0.144846518960824,0.795285947051099,0,0,0.221729397462564,0.087834785693126,0.196468613246569,0,0,0,0,0,42.9283123749616,32.0317150036872,45.6892726635365,0.198762407366705,0.860234595106124,0,0,0,0.275118041940067,0.208994966536811,0.258416759169329,0.35576626268671,0.66944122552934,0,0,0,0,0,0.357198913136319,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0,0.538842688278752,1.14423332179421,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0.900273288253207,0.103052529238439,0,0,0.337552664482532,0.0974370051611986,0.252433774244115,0.184099797284599,0,0.355009592516614,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,1.04007436911366,0,0,0,0,0.542621605391443,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.508189248444927,3.90419561572865,1.54657762555539,2.84777651068393,1.27587750330633,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0,0.343143423810856,0.413536052245775,0.647142602455851,0.74709290462411,0,0,0,0,0.460385919864187,0.280660094433074,0,0.511707249066704,0,0,0,0,0.164254312027618,1.03850885836724,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0.154048617114644,0,0.137836572484531,0.322260734604821,0.145016693914229,0.170453254832202,0.178064071293475,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0.421258456238981,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84991942105343,0,0,1.73123055571734,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0.994147647766298,1.54736358051564,0.222617410045812,0.494411622680279,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0,0,0,0,0.511572370226872,0.591860433821602,2.3948309234694,0,0,0.463840490809256,1.99613798001194,0,0,1.44999915086959,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0.230850775511391,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,2.16388639742091,0,0.353830258013357,0,0,0,0,0.134802265961354,0.802577647298789,0.937057782901357,0,0,0,1.18375320854817,0,7.03967351750127,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.353024506766001,0.225980740780532,0,0,0.759729551470544,0,0,0.213452994739353,0,0,1.03082936549324,0,0,0,0,0.271808412147228,0.836822770498666,0,0,0,0.410716136675979,0,0,0,0.837847203816763,0.229160424011684,0.717873024576814,0,0.429226048136571,0.89268582976749,0.671834724867263,0.360299883542404,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0.321506296930038,0.137539436597234,0.415440338029185,0,0,0.546746009922222,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0.387848869084652,0.26446520348538,0,0,1.28144895081234,1.57204305099666,1.24271716604159,0,0,0.243585196761792,0,0,0.2506898940227,0.306345576763462,0,5.65394746500843,0,0.488105059607853,1.1267183763585,0,0.443716206147409,0.248385611765534,0,0,0,0,0,0,0.724605143054126,0.597019211547496,0,0,0,0,0,0,0,0.310874401165561,0.147855149989634,0.159296767163702,0,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0,0,0,0,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0.629063767423586,0.873677105536111,0,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0.834979926253974,1.41696576325585,0.957803154342908,0.205116364240755,5.29350562065608,0.0691572524642179,0.645902582527404,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.810451015420736,0,0.620060389503552,0.634158101939068,6.56369770821863,0,0,0,0,0,0,0,0.682986574053893,0.266107110487916,0,0.514464028312255,0.203909198930495,0.72350050919134,0,0,0.235479278551542,0.471346769748006,0,1.82631744101899,0,0,0.142953088353313,0,0,0.173858272302579,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.513314034281235,0,0.971421986118279,0,0.198950775161368,0,21.7985938335193,0,1.35866559210006,0.231522474323834,1.09279780251979,0,0,0,0.588925401344836,0.594092800654172,0,0,0.0939839179798536,0.193373663920732,0,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| ||
|short_description=p30@TCF4 | |||
}} | }} |
Latest revision as of 21:18, 19 September 2015
Short description: | p30@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_TCF4_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 13bp_to_ENST00000540999, uc010xdx.1_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | B7Z6Y1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 2.64e-18 | 3 |
neuronal stem cell | 3.30e-11 | 8 |
neuron | 1.01e-08 | 6 |
neuroblast | 1.01e-08 | 6 |
electrically signaling cell | 1.01e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
neocortex | 5.76e-09 | 20 |
regional part of cerebral cortex | 3.91e-08 | 22 |
cerebral cortex | 3.98e-07 | 25 |
pallium | 3.98e-07 | 25 |
maxillary sinus | 4.43e-07 | 1 |
paranasal sinus | 4.43e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 4.43e-07 | 1 |
maxillary sinus cancer | 4.43e-07 | 1 |