FFCP PHASE1:Hg19::chr19:13617584..13617596,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:13617584..13617596,- to FFCP PHASE1:Hg19::chr19:13617584..13617596,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=773 | |EntrezGene=773 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1388 | |HGNC=1388 | ||
|TSSclassifier=strong | |||
|UniProt=O00555,Q9NS88,B5TYJ1 | |UniProt=O00555,Q9NS88,B5TYJ1 | ||
|association_with_transcript=-310bp_to_ENST00000325084,ENST00000360228,NM_000068,NM_001127221,NM_001127222,NM_001174080,NM_023035,uc002mwy.3,uc010dze.2_5end | |||
|cluster_id=chr19:13617584..13617596,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_7_at_CACNA1A_5end | |||
|id=chr19:13617584..13617596,- | |||
|ontology_enrichment_celltype=CL:0000047!9.13e-07!8 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.37e-13;3!UBERON:0005425;2.50e-10;1!UBERON:0006601;2.28e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.25e-48!82;UBERON:0001049!3.14e-48!57;UBERON:0005068!3.14e-48!57;UBERON:0006241!3.14e-48!57;UBERON:0007135!3.14e-48!57;UBERON:0005743!6.95e-48!86;UBERON:0000073!2.39e-44!94;UBERON:0001016!2.39e-44!94;UBERON:0002616!3.57e-41!59;UBERON:0002020!1.09e-39!34;UBERON:0003528!1.09e-39!34;UBERON:0001893!1.17e-39!34;UBERON:0001869!1.42e-39!32;UBERON:0002619!2.52e-38!22;UBERON:0002791!1.07e-37!33;UBERON:0000955!1.29e-37!69;UBERON:0006238!1.29e-37!69;UBERON:0002780!6.95e-37!41;UBERON:0001890!6.95e-37!41;UBERON:0006240!6.95e-37!41;UBERON:0003080!8.06e-36!42;UBERON:0003075!1.72e-35!86;UBERON:0007284!1.72e-35!86;UBERON:0002346!4.03e-35!90;UBERON:0001950!2.72e-34!20;UBERON:0000956!3.66e-33!25;UBERON:0000203!3.66e-33!25;UBERON:0007023!4.99e-30!115;UBERON:0003056!6.85e-24!61;UBERON:0000924!3.29e-21!173;UBERON:0006601!3.29e-21!173;UBERON:0004121!5.45e-21!169;UBERON:0000033!4.83e-20!123;UBERON:0000153!1.37e-18!129;UBERON:0007811!1.37e-18!129;UBERON:0000200!2.00e-14!6;UBERON:0003076!3.81e-13!15;UBERON:0003057!3.81e-13!15;UBERON:0004732!6.10e-13!13;UBERON:0001872!7.42e-13!5;UBERON:0000349!6.59e-12!5;UBERON:0004733!4.61e-11!12;UBERON:0002028!4.61e-11!12;UBERON:0007277!4.61e-11!12;UBERON:0001871!1.51e-10!7;UBERON:0000025!4.58e-10!194;UBERON:0002680!1.14e-08!9;UBERON:0001895!1.14e-08!9;UBERON:0010092!1.14e-08!9;UBERON:0002420!1.47e-08!9;UBERON:0007245!1.47e-08!9;UBERON:0010009!1.47e-08!9;UBERON:0010011!1.47e-08!9;UBERON:0000454!1.47e-08!9;UBERON:0002021!1.85e-08!5;UBERON:0002308!3.13e-08!9;UBERON:0000125!3.13e-08!9;UBERON:0002771!4.85e-08!3;UBERON:0000988!2.80e-07!3;UBERON:0002298!7.15e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;3.96e-82;20!UBERON:0002619;8.26e-75;22!UBERON:0000956;6.13e-66;25!UBERON:0000203;6.13e-66;25!UBERON:0001869;2.10e-51;32!UBERON:0001893;1.43e-50;34!UBERON:0002791;7.46e-50;32!UBERON:0003528;1.27e-47;34!UBERON:0002020;1.27e-47;34!UBERON:0001872;2.27e-45;5!UBERON:0002780;3.17e-33;41!UBERON:0001890;3.17e-33;41!UBERON:0002021;3.31e-29;5!UBERON:0000073;1.50e-26;53!UBERON:0002616;1.50e-26;53!UBERON:0000955;8.01e-17;68!UBERON:0001016;1.55e-16;83!UBERON:0001017;2.59e-15;75!UBERON:0000200;1.82e-14;6!UBERON:0001870;6.16e-13;3!UBERON:0002581;9.37e-11;1!UBERON:0002902;9.37e-11;1!UBERON:0009899;9.37e-11;1!UBERON:0001882;2.50e-10;1!UBERON:0002022;2.50e-10;1!UBERON:0003112;2.50e-10;1!UBERON:0000941;2.50e-10;1!UBERON:0001785;2.50e-10;1!UBERON:0002464;2.50e-10;1!UBERON:0004904;2.50e-10;1!UBERON:0011158;2.50e-10;1!UBERON:0001021;2.50e-10;1!UBERON:0003128;2.50e-10;1!UBERON:0005403;2.50e-10;1!UBERON:0001703;2.50e-10;1!UBERON:0002241;2.50e-10;1!UBERON:0007023;9.73e-09;114!UBERON:0011216;8.13e-08;132!UBERON:0002037;3.18e-07;6!UBERON:0004732;5.62e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.53e-82,20;UBERON:0002619,5.49e-75,22;UBERON:0000956,4.27e-66,25;UBERON:0000203,4.27e-66,25;UBERON:0002791,2.81e-59,32;UBERON:0001869,2.81e-59,32;UBERON:0003528,9.24e-56,34;UBERON:0002020,9.24e-56,34;UBERON:0001893,9.24e-56,34;UBERON:0002780,4.37e-46,41;UBERON:0001890,4.37e-46,41;UBERON:0003080,4.37e-46,41;UBERON:0006240,4.37e-46,41;UBERON:0000073,4.94e-46,53;UBERON:0002616,4.94e-46,53;UBERON:0001872,1.90e-45,5;UBERON:0001049,1.79e-43,56;UBERON:0005068,1.79e-43,56;UBERON:0006241,1.79e-43,56;UBERON:0007135,1.79e-43,56;UBERON:0000955,2.89e-39,68;UBERON:0006238,2.89e-39,68;UBERON:0001017,1.37e-36,81;UBERON:0001016,1.70e-36,89;UBERON:0003056,8.03e-35,61;UBERON:0003075,9.68e-33,82;UBERON:0007284,9.68e-33,82;UBERON:0002346,4.15e-31,86;UBERON:0002021,1.92e-29,5;UBERON:0010371,2.67e-25,104;UBERON:0007023,4.06e-23,114;UBERON:0010314,7.55e-22,132;UBERON:0004121,6.67e-18,171;UBERON:0000924,6.67e-18,171;UBERON:0006601,6.67e-18,171;UBERON:0011216,1.26e-14,223;UBERON:0000200,1.82e-14,6;UBERON:0001870,5.81e-13,3;UBERON:0000025,6.64e-11,192;UBERON:0002902,8.95e-11,1;UBERON:0009899,8.95e-11,1;UBERON:0002581,1.19e-10,1;UBERON:0003112,1.30e-10,1;UBERON:0011158,1.30e-10,1;UBERON:0003128,1.30e-10,1;UBERON:0001703,1.30e-10,1;UBERON:0002241,1.30e-10,1;UBERON:0004761,1.30e-10,1;UBERON:0009617,1.30e-10,1;UBERON:0000941,2.28e-10,1;UBERON:0001785,2.28e-10,1;UBERON:0002464,2.28e-10,1;UBERON:0004904,2.28e-10,1;UBERON:0001021,2.28e-10,1;UBERON:0003902,2.28e-10,1;UBERON:0005425,2.28e-10,1;UBERON:0002022,2.74e-10,1;UBERON:0001882,3.61e-10,1;UBERON:0005403,3.61e-10,1;UBERON:0004111,3.70e-08,240;UBERON:0002037,2.95e-07,6;UBERON:0006215,2.95e-07,6;UBERON:0004732,5.24e-07,13 | |||
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| ||
|short_description=p7@CACNA1A | |||
}} | }} |
Latest revision as of 01:14, 16 September 2015
Short description: | p7@CACNA1A |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CACNA1A_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -310bp_to_ENST00000325084, ENST00000360228, NM_000068, NM_001127221, NM_001127222, NM_001174080, NM_023035, uc002mwy.3, uc010dze.2_5end |
EntrezGene: | CACNA1A |
HGNC: | 1388 |
UniProt: | O00555Q9NS88B5TYJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data