FFCP PHASE1:Hg19::chr19:14064187..14064204,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:14064187..14064204,- to FFCP PHASE1:Hg19::chr19:14064187..14064204,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79883 | |EntrezGene=79883 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26275 | |HGNC=26275 | ||
|TSSclassifier=strong | |||
|UniProt=F5H7F9,G3V1J6,F6T8U4,B7Z3M0,B7Z564,Q6PEZ8 | |UniProt=F5H7F9,G3V1J6,F6T8U4,B7Z3M0,B7Z564,Q6PEZ8 | ||
|association_with_transcript=0bp_to_ENST00000538371,ENST00000538517,ENST00000545071,NM_001146254,NM_001146255,uc002mxs.2,uc010xnj.1_5end | |||
|cluster_id=chr19:14064187..14064204,- | |||
|description=CAGE_peak_3_at_PODNL1_5end | |||
|id=chr19:14064187..14064204,- | |||
|ontology_enrichment_celltype=CL:0000055!3.37e-09!180;CL:0002371!1.40e-07!591;CL:0000057!2.08e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002159;2.28e-08;14!CL:0002620;4.30e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.81e-08,14;CL:0002620,3.39e-08,23;CL:0000057,3.39e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.80e-13!95;UBERON:0000468!9.36e-11!659;UBERON:0002199!1.49e-07!45;UBERON:0002416!1.49e-07!45;UBERON:0000467!2.93e-07!625;UBERON:0000480!4.62e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002199;1.71e-09;46!UBERON:0002416;1.71e-09;46!UBERON:0003102;5.78e-09;50!UBERON:0002097;7.80e-08;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.88e-17,99;UBERON:0002199,2.27e-13,46;UBERON:0002416,2.27e-13,46;UBERON:0002097,8.16e-11,41;UBERON:0000486,9.17e-07,83 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.563817616383885,0,0,0,5.06599756336621,1.26343974685366,2.08948502559871,0.491467873003018,0.697801167972428,0.218441372130172,0.263766978228454,1.98026164736075,1.65698687863958,3.36162573225888,2.41077811209591,0.730310090387373,1.46379839637152,0.738726348460727,0.408001382488506,0,0,0.136874425072884,0,0.0764134057479513,0,0.0787107813136792,0.393364276848904,0,0.309632246632152,0.919421224478927,2.71085326900425,1.84877005083394,0,0,0,0,1.00272223735071,0.651032612147555,0.223915474239924,0.32389366601898,1.03030227053675,1.30858414901608,1.13362783106643,1.21292030593908,0.697287110717054,2.05583944010913,0.309706370895104,0.28769239232215,0.768482119587302,0.236482229888585,0,0,0,0.564727018627814,0.272906150057846,0.224723484445085,0.918251677112708,0.962787081228281,0,0.329851300186716,0.199463657621632,0.426224750532694,2.03146467040009,0.56738522469114,0.622822248995575,0.75374599577023,0,0.217188844705117,0.605399502633369,0.368277635987565,0,0,0,0.209658645508376,0.786300418025466,0.750884464207532,0.32145117339416,0,0.79566670879636,0,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,1.32171328579026,0,0.263384084775077,0,0.393010762749165,0,0.167186495390678,0,0,0,0.111410456885174,0.294605907474837,0,0,0.25618263945135,0,0.328875809207352,0,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0.144824403882799,2.43806866313962,0,0.255725123687061,2.1686349143074,1.00267582127178,1.73815822752988,0,0,0.472674085820339,0.443458794925128,0.263504357079378,0.785874452986276,2.91436230634034,2.59549109949101,2.92092654289215,3.65672448328461,5.31831842075461,0.238490624305342,0,0,0.39752481473341,1.72046919021225,0,0,2.93649605346934,0.550236083880135,1.25396979922086,0.516833518338658,1.06729878806013,0,0.805658634218294,0.760272105718513,0.732186172644509,1.10298924103761,0,0.17859945656816,0,0.112611480483322,1.53316637465883,0.949265659568129,0.732806975721629,1.31780417436063,0,3.48875241714027,0.993943903390637,0.379891534993739,0.794455084879313,1.43418310374407,1.06400514659507,0,0,0.98667019366864,0.311211035399766,0,0.163461903113459,1.05950199351452,0.576175924479999,1.40592859100278,2.18512053781224,0,1.34503812496621,0.23486899728753,0,0.140450806702248,1.63323337003915,1.22834317311768,0.826606249406124,1.18800285728205,0.741800787835671,0,0.718618141816238,0.336672227908132,0.750711119231785,0.831192346452549,0.877955241761676,1.5324389789951,0.45071417671979,1.02088964844019,0.89694817844431,2.13557388818567,1.05965950579781,2.70081986475962,1.54578793857658,1.8034837803194,2.79175284497385,2.19409231913646,3.60516919096435,1.7670364197088,1.38074847963449,3.55621325001386,2.13005755509969,2.11579406278045,2.37384829234683,3.47869535693934,3.27295344709002,2.58124135850103,0.365921118388786,0.530119073285941,0.813357600086629,0.518305275076852,0,0.36497735907583,0,1.28648187638577,4.14404764057442,2.3218396401599,4.33127689001751,0.236613600079688,0.168584690078102,0.241011029883482,0.330881918197182,0.217879444092406,0.237270619111097,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0.122988438543114,0.857839051492628,6.47526683910891,3.37205259772859,0.502644862058154,1.66659201285353,0.651616610620649,2.07986957055916,0,0.463721619900307,0.352226082707465,0,0.462985512576611,0,11.8530659693891,12.0188062693282,1.23108503043699,0.234004265139238,0.743155811443641,2.81201501960331,3.52762469217605,4.53680311175637,2.4180801129769,2.03443756959773,1.91691339582606,0,0.176096868026452,0.621984346622316,0.144119953416961,0,0.190493682876507,0.381988425558278,0,1.71072446022705,0,0,0,0.112131084345361,0,0.22001485746285,1.68053230485111,17.8828222925941,0,1.59562869950922,1.04007436911366,0.771622122786426,0,1.0656887160644,1.42977993658148,2.71310802695722,1.64648067356154,0,0.355391948742546,0.791951872933429,0.301439377059586,0,0.199945982364114,0,1.00451418286425,2.10833939483032,0.479249710983165,0,0,1.01346914667305,2.26023954805422,0.179060963239896,0.560425719967636,0.197030760201927,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0.736148950314839,2.50085260529839,0.271265023699736,0.831883446123229,1.60586089917446,1.89242898040722,1.05427273493442,3.91229929646035,6.82222512167955,1.03473071292505,0.664225598535437,0.921845842708516,2.25897397617015,0.783204629850962,1.37257369524342,0,0.431428401637234,0.106727557803444,1.5156378572313,1.66435439510497,2.11673205330776,0.992431231275107,1.07423381301644,0.841980283299221,0.896974044789907,2.04682899626681,0,1.48418066444991,1.07946785661859,1.24293207719189,1.56041596426237,1.55776328755086,0.813472649219715,0.120859449591622,4.81215528727884,1.84161977871793,0.803701137152247,0.182091168006717,1.04899531967539,0,0.385076685522074,0.784349769176855,0,0.73886140225013,2.27466768141793,0.850468526382578,0.647747748306418,0,0.541892875087706,1.50506932156456,0,0,0.2238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| ||
|short_description=p3@PODNL1 | |||
}} | }} |
Latest revision as of 03:06, 16 September 2015
Short description: | p3@PODNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PODNL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000538371, ENST00000538517, ENST00000545071, NM_001146254, NM_001146255, uc002mxs.2, uc010xnj.1_5end |
EntrezGene: | PODNL1 |
HGNC: | 26275 |
UniProt: | F5H7F9G3V1J6F6T8U4B7Z3M0B7Z564Q6PEZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 1.81e-08 | 14 |
skin fibroblast | 3.39e-08 | 23 |
fibroblast | 3.39e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
surface structure | 2.88e-17 | 99 |
integument | 2.27e-13 | 46 |
integumental system | 2.27e-13 | 46 |
skin of body | 8.16e-11 | 41 |
multilaminar epithelium | 9.17e-07 | 83 |