FFCP PHASE1:Hg19::chr19:18391642..18391645,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:18391642..18391645,- to FFCP PHASE1:Hg19::chr19:18391642..18391645,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3727 | |EntrezGene=3727 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6206 | |HGNC=6206 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=112bp_to_BC169274_5end | |||
|cluster_id=chr19:18391642..18391645,- | |||
|description=CAGE_peak_10_at_JUND_5end | |||
|id=chr19:18391642..18391645,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000623;1.48e-24;3!CL:0000097;1.42e-15;5!CL:0000542;4.57e-14;53!CL:0000084;5.84e-11;25!CL:0000163;7.04e-09;9!CL:0000791;2.87e-07;18!CL:0000789;2.87e-07;18!CL:0002419;2.87e-07;18!CL:0000625;4.37e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,6.32e-25,3;CL:0000825,6.32e-25,3;CL:0000838,3.26e-20,52;CL:0000542,8.57e-20,53;CL:0000051,8.57e-20,53;CL:0000738,5.45e-18,136;CL:0002031,3.29e-16,120;CL:0000097,1.45e-15,5;CL:0002028,1.45e-15,5;CL:0002032,1.08e-14,161;CL:0000837,1.08e-14,161;CL:0000037,6.07e-14,168;CL:0000988,4.57e-13,177;CL:0002087,4.89e-11,115;CL:0000084,5.20e-11,25;CL:0000827,5.20e-11,25;CL:0000163,7.14e-09,9;CL:0000134,3.40e-08,354;CL:0002320,5.86e-08,361;CL:0000791,2.45e-07,18;CL:0000789,2.45e-07,18;CL:0002420,2.45e-07,18;CL:0002419,2.45e-07,18;CL:0000790,2.45e-07,18;CL:0000219,3.98e-07,386;CL:0000625,3.98e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;4.57e-14;53!CL:0000790;2.87e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;3.25e-09;1!DOID:0060061;3.25e-09;1!DOID:8691;3.25e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.35e-09,1;DOID:0060061,2.35e-09,1;DOID:8691,2.35e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.23e-07,371 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0,0,0.246242116153576,0,0,0,0,0.251085279189606,0.0764134057479513,0.0821005894499457,0,2.36018566109342,0.383829398097213,0.464448369948228,0,0,0,0,0,0.293600439334847,0,0.401088894940283,1.08505435357926,0,0,0.257575567634187,0.145398238779565,0.377875943688809,0.485168122375632,0,0.411167888021826,0,0,0,0.236482229888585,0,1.29096936716765,0,0.752969358170419,0.545812300115692,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0,0,0,0.637812899895131,0.209658645508376,0.112328631146495,0.150176892841506,0,0,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0.661044872784862,0,2.27685187643779,2.34894875748376,3.05818582500183,1.32171328579026,0,0.526768169550154,0.393419540227666,0.393010762749165,1.43921049299656,0,0.32592226663359,0.473447805734733,0,0.334231370655521,0.589211814949674,0.443067789167242,0,0,0,0.164437904603676,0.552700035571697,0.579606171470105,0.444859689486181,0.267540828089713,0,0,0,0.34362744548263,0.759059076058509,0,0,0,0,0,0,0,0,2.62088766192152,1.33720097891754,1.15859523106239,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0.0654895377488563,0.364295288292542,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.232387885739037,0.10366105501537,0.252320850875628,0,0,0.643240938192885,0,0,0,0.236613600079688,0.168584690078102,0,0.220587945464788,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0.219500570817251,0,0,0.185176890317059,0,0,0,0,0.117408694235822,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.088048434013226,2.69526550203004,3.31475892859011,2.01987893482208,0,0.381988425558278,0,0,0.308482478109971,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,1.97030760201927,1.50939302401662,2.05348858047597,0,0,0,0,0,0,2.99161459204025,0.414415513436035,0.24538298343828,0,0,0.415941723061614,0.178428988797162,0,0,0.601892199455438,0,1.03473071292505,0,0.184369168541703,0.260650843404249,0,0.343143423810856,0.620304078368662,0.647142602455851,0.960548020230999,0,0,0.604780586659361,0,0,0,0.384417447767103,0,0,0,0,0,0,0,0.116210378459959,0.241718899183244,0,0.368323955743585,0.114814448164607,0,0.524497659837696,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.103041011647722,0.0915694648183434,0,0,0,0,0.290012154876366,0,0,0,0.214840489736547,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0.563391205064483,0,0,0,0,0.422215270595328,0.658589785919804,0,0,0,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0.79312517629427,0.106824071127473,0,0.245040215981032,0.371606350251437,0,0.142283686696828,0,0,0,0,0,0,0.228234679033192,0,0,0,0.481764225311099,0.201799707191048,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0.439524537815682,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0.21787692703798,0,0.384751292518985,0.113942055847001,0,0.987334088507493,0,0.638002319463839,0.457987967009312,1.06606955203727,1.02193298195737,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,0,0.593042257361244,0.370691816839509,0,0.067401132980677,0,0.234264445725339,0.182454789215666,0,0,0,0,0.30607276163049,0.442306057399416,0.450970258243478,0,0,0,0,0,0,0.138674673013139,0.347119476670262,0.0979923974143777,0,0.17472666824203,0.859930162358083,0,0,0,0.193978032976839,0.264768380074501,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0.144090417154106,0.114536596165916,0.514784993585894,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0.13480708770837,0,0,0,0,0,0.137539436597234,0,0,0,0.121499113316049,0.335434687599266,0.0788057072991982,0.157363764404994,0,0,0.191915197319445,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0,0,0.640724475406168,0.314408610199332,0.828478110694391,0,0.395223263795889,0,0,0.544017803369474,0.5013797880454,0.306345576763462,0.655745261419609,0,0.886068179966986,0.122026264901963,0,0,0.110929051536852,0.0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| ||
|short_description=p10@JUND | |||
}} | }} |
Latest revision as of 15:14, 16 September 2015
Short description: | p10@JUND |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_JUND_5end |
Coexpression cluster: | NA |
Association with transcript: | 112bp_to_BC169274_5end |
EntrezGene: | JUND |
HGNC: | 6206 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 6.32e-25 | 3 |
pro-NK cell | 6.32e-25 | 3 |
lymphoid lineage restricted progenitor cell | 3.26e-20 | 52 |
lymphocyte | 8.57e-20 | 53 |
common lymphoid progenitor | 8.57e-20 | 53 |
leukocyte | 5.45e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 3.29e-16 | 120 |
mast cell | 1.45e-15 | 5 |
basophil mast progenitor cell | 1.45e-15 | 5 |
hematopoietic oligopotent progenitor cell | 1.08e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.08e-14 | 161 |
hematopoietic stem cell | 6.07e-14 | 168 |
hematopoietic cell | 4.57e-13 | 177 |
nongranular leukocyte | 4.89e-11 | 115 |
T cell | 5.20e-11 | 25 |
pro-T cell | 5.20e-11 | 25 |
endocrine cell | 7.14e-09 | 9 |
mesenchymal cell | 3.40e-08 | 354 |
connective tissue cell | 5.86e-08 | 361 |
mature alpha-beta T cell | 2.45e-07 | 18 |
alpha-beta T cell | 2.45e-07 | 18 |
immature T cell | 2.45e-07 | 18 |
mature T cell | 2.45e-07 | 18 |
immature alpha-beta T cell | 2.45e-07 | 18 |
motile cell | 3.98e-07 | 386 |
CD8-positive, alpha-beta T cell | 3.98e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.23e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.35e-09 | 1 |
cutaneous T cell lymphoma | 2.35e-09 | 1 |
mycosis fungoides | 2.35e-09 | 1 |