FFCP PHASE1:Hg19::chr19:35759976..35760042,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:35759976..35760042,+ to FFCP PHASE1:Hg19::chr19:35759976..35760042,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7392 | |EntrezGene=7392 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12594 | |HGNC=12594 | ||
|TSSclassifier=strong | |||
|UniProt=Q6YI47 | |UniProt=Q6YI47 | ||
|association_with_transcript=0bp_to_ENST00000379134_5end | |||
|cluster_id=chr19:35759976..35760042,+ | |||
|description=CAGE_peak_4_at_USF2_5end | |||
|id=chr19:35759976..35760042,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.63e-08!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.14e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.76e-10!347;UBERON:0000922!1.86e-10!612;UBERON:0005177!3.07e-10!107;UBERON:0000062!3.14e-10!511;UBERON:0002050!5.27e-10!605;UBERON:0005423!5.27e-10!605;UBERON:0000923!7.44e-10!604;UBERON:0005291!7.44e-10!604;UBERON:0006598!7.44e-10!604;UBERON:0002532!7.44e-10!604;UBERON:0005172!1.37e-08!55;UBERON:0005173!1.37e-08!55;UBERON:0000468!1.40e-07!659;UBERON:0000467!1.93e-07!625;UBERON:0000480!3.53e-07!626;UBERON:0003104!3.88e-07!238;UBERON:0009142!3.88e-07!238;UBERON:0002417!7.97e-07!61;UBERON:0000916!7.97e-07!61 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,2.96e-10,592;UBERON:0005177,7.09e-10,101;UBERON:0005423,1.14e-09,581;UBERON:0005172,5.25e-09,54;UBERON:0005173,5.25e-09,54;UBERON:0000923,1.24e-07,560;UBERON:0010316,1.24e-07,560;UBERON:0005291,1.24e-07,560;UBERON:0006598,1.24e-07,560;UBERON:0010317,1.24e-07,560;UBERON:0002532,1.24e-07,560;UBERON:0002417,3.76e-07,60;UBERON:0000916,3.76e-07,60;UBERON:0006554,4.03e-07,47;UBERON:0002050,4.24e-07,564;UBERON:0000489,4.68e-07,31;UBERON:0001008,4.96e-07,48;UBERON:0003104,8.37e-07,160;UBERON:0009142,8.37e-07,160 | |||
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| ||
|short_description=p4@USF2 | |||
}} | }} |
Latest revision as of 11:13, 17 September 2015
Short description: | p4@USF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_USF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000379134_5end |
EntrezGene: | USF2 |
HGNC: | 12594 |
UniProt: | Q6YI47 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.14e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
embryo | 2.96e-10 | 592 |
trunk region element | 7.09e-10 | 101 |
developing anatomical structure | 1.14e-09 | 581 |
abdomen element | 5.25e-09 | 54 |
abdominal segment element | 5.25e-09 | 54 |
germ layer | 1.24e-07 | 560 |
germ layer / neural crest | 1.24e-07 | 560 |
embryonic tissue | 1.24e-07 | 560 |
presumptive structure | 1.24e-07 | 560 |
germ layer / neural crest derived structure | 1.24e-07 | 560 |
epiblast (generic) | 1.24e-07 | 560 |
abdominal segment of trunk | 3.76e-07 | 60 |
abdomen | 3.76e-07 | 60 |
urinary system structure | 4.03e-07 | 47 |
embryonic structure | 4.24e-07 | 564 |
cavitated compound organ | 4.68e-07 | 31 |
renal system | 4.96e-07 | 48 |
mesenchyme | 8.37e-07 | 160 |
entire embryonic mesenchyme | 8.37e-07 | 160 |