FFCP PHASE1:Hg19::chr1:109241930..109241941,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:109241930..109241941,+ to FFCP PHASE1:Hg19::chr1:109241930..109241941,+: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55119 | |EntrezGene=55119 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=25512 | |HGNC=25512 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VTL8 | |UniProt=Q5VTL8 | ||
|association_with_transcript=-262bp_to_AY211915_5end | |||
|cluster_id=chr1:109241930..109241941,+ | |||
|description=CAGE_peak_7_at_PRPF38B_5end | |||
|id=chr1:109241930..109241941,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.58e-14!172;CL:0000566!2.58e-14!172;CL:0002032!3.30e-14!165;CL:0000837!3.30e-14!165;CL:0002087!4.17e-12!119;CL:0000988!7.28e-12!182;CL:0002031!2.10e-09!124;CL:0000738!1.36e-08!140;CL:0000542!2.61e-08!53;CL:0000051!2.61e-08!53;CL:0000838!6.10e-08!52;CL:0000763!4.81e-07!112;CL:0000049!4.81e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.96e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,3.92e-15,161;CL:0000837,3.92e-15,161;CL:0000037,3.83e-14,168;CL:0000542,6.89e-13,53;CL:0000051,6.89e-13,53;CL:0000988,2.30e-12,177;CL:0000838,2.97e-12,52;CL:0002087,3.64e-11,115;CL:0002031,5.58e-09,120;CL:0000738,7.03e-08,136 | |||
|ontology_enrichment_development_v019=CL:0000051;1.96e-07;53 | |||
|ontology_enrichment_disease=DOID:162!1.82e-18!235;DOID:14566!8.99e-18!239;DOID:2531!4.53e-13!51;DOID:0060083!4.53e-13!51;DOID:1240!7.32e-13!39;DOID:8692!1.15e-09!31;DOID:0050686!2.46e-09!137;DOID:0050687!2.09e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:1240;7.87e-13;39!DOID:8692;6.13e-11;31!DOID:2531;1.20e-10;51!DOID:0060083;1.20e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.59e-16,39;DOID:2531,1.55e-15,51;DOID:0060083,1.55e-15,51;DOID:8692,2.78e-11,31;DOID:162,7.64e-09,235;DOID:14566,3.07e-08,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p7@PRPF38B | |||
}} | }} |
Latest revision as of 19:58, 15 September 2015
Short description: | p7@PRPF38B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PRPF38B_5end |
Coexpression cluster: | NA |
Association with transcript: | -262bp_to_AY211915_5end |
EntrezGene: | PRPF38B |
HGNC: | 25512 |
UniProt: | Q5VTL8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 3.92e-15 | 161 |
hematopoietic multipotent progenitor cell | 3.92e-15 | 161 |
hematopoietic stem cell | 3.83e-14 | 168 |
lymphocyte | 6.89e-13 | 53 |
common lymphoid progenitor | 6.89e-13 | 53 |
hematopoietic cell | 2.30e-12 | 177 |
lymphoid lineage restricted progenitor cell | 2.97e-12 | 52 |
nongranular leukocyte | 3.64e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 5.58e-09 | 120 |
leukocyte | 7.03e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.59e-16 | 39 |
hematologic cancer | 1.55e-15 | 51 |
immune system cancer | 1.55e-15 | 51 |
myeloid leukemia | 2.78e-11 | 31 |
cancer | 7.64e-09 | 235 |
disease of cellular proliferation | 3.07e-08 | 239 |