FFCP PHASE1:Hg19::chr1:150532861..150532875,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:150532861..150532875,+ to FFCP PHASE1:Hg19::chr1:150532861..150532875,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:150532861..150532875,+ | |||
|description=CAGE_peak_at_chr1:150532861..150532875,+ | |||
|id=chr1:150532861..150532875,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002541;2.59e-15;3!CL:0002623;1.03e-14;3!CL:0000349;1.15e-11;19!CL:0002561;1.25e-10;2!CL:0000622;5.09e-09;5!CL:0000154;1.38e-07;6!CL:0000135;4.90e-07;3!CL:0000388;4.90e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.57e-15,3;CL:0002623,4.75e-15,3;CL:0000349,1.44e-11,19;CL:0002561,1.06e-10,2;CL:0000622,3.23e-09,5;CL:0000154,9.46e-08,6;CL:0000135,3.49e-07,3;CL:0000388,3.49e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;8.24e-09;5!DOID:450;8.24e-09;5!DOID:66;8.24e-09;5!DOID:423;8.24e-09;5!DOID:0080000;8.24e-09;5!DOID:11722;8.24e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.21e-09,5;DOID:450,7.21e-09,5;DOID:66,7.21e-09,5;DOID:423,7.21e-09,5;DOID:0080000,7.21e-09,5;DOID:11722,7.21e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0004923!5.67e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.59e-15;3!UBERON:0000920;2.59e-15;3!UBERON:0000478;9.08e-15;24!UBERON:0005631;4.38e-12;10!UBERON:0000158;4.38e-12;10!UBERON:0005933;1.25e-10;2!UBERON:0005942;1.25e-10;2!UBERON:0005932;1.25e-10;2!UBERON:0001044;1.38e-07;6!UBERON:0003293;1.38e-07;6!UBERON:0003294;1.38e-07;6!UBERON:0010047;1.38e-07;6!UBERON:0003408;1.38e-07;6!UBERON:0000167;1.38e-07;6!UBERON:0007846;4.90e-07;3!UBERON:0000043;4.90e-07;3!UBERON:0007845;4.90e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,2.61e-17,7;UBERON:0005631,2.89e-16,14;UBERON:0000158,2.89e-16,14;UBERON:0000920,3.57e-15,3;UBERON:0000478,9.53e-15,24;UBERON:0005933,1.06e-10,2;UBERON:0005942,1.06e-10,2;UBERON:0005932,1.06e-10,2;UBERON:0001044,9.46e-08,6;UBERON:0003293,9.46e-08,6;UBERON:0003294,9.46e-08,6;UBERON:0010047,9.46e-08,6;UBERON:0000167,9.46e-08,6;UBERON:0007846,3.49e-07,3;UBERON:0000043,3.49e-07,3;UBERON:0007845,3.49e-07,3 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0.527533956456907,0.495065411840187,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0.309632246632152,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0.434021741431704,0.223915474239924,0,0.515151135268373,0.145398238779565,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0.612167784741805,0,0,0.329851300186716,0.398927315243264,0,0,0,0,0,0,0.217188844705117,0,0,0,0.211255286311942,0.425208599930087,0,0.112328631146495,0.150176892841506,0,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.0654895377488563,0,0,0.324547393654683,0.696518949197069,1.72845348674525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0.496971951695318,0.12663051166458,0.132409180813219,1.14734648299525,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0.624320153660641,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0.206651562351531,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0.113432183160021,1.25572744982203,1.70845911054854,1.27159140695737,0.300091096084402,0,1.03056216018252,0.930584281657949,0,0.194874010322397,0.252433774244115,0.276149695926898,0.969876340912871,0.355009592516614,0,0.169560592310488,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,0,0,0,3.25057549622385,1.44375896333917,0.591534000199219,0.505754070234305,0,0.661763836394364,0,0.71181185733329,0,0.588664395376038,0,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0.245976877086227,0,0,0,0,0.185176890317059,0.325808305310325,0,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,0.468008530278475,0,0,0,0,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0.285955987316295,1.08524321078289,0,0,0,0,0,0,0,0,0,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,1.00034104211935,0.271265023699736,0.207970861530807,2.85486382075459,1.73472656537328,0.35142424497814,0,0,0,0,0,0.0868836144680828,0.391602314925481,0,0.413536052245775,0.215714200818617,0,0,3.32870879020994,0.30239029332968,0,0.153461973288062,0.280660094433074,0.256278298511402,0,0.321707842287215,1.48418066444991,0,0,0,0,0,0.120859449591622,0,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0.0915694648183434,0,0.574265537996172,0,0,0,0,0.15350367472613,0.137836572484531,0.214840489736547,0.580066775656914,0.170453254832202,0.0890320356467374,0,0,0,0,2.78907329578371,2.20368642781448,0,0,0,0,0,0,0,0.316379424718726,0,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0,0.392996164052485,0,0.709522128141196,0,0.987884678879706,0,0,0,0,0,0.376575203107117,0,0,0.443430153536676,0.229723400206959,0,0.764637207142375,0.569647187174163,0,0,0,0.540031437238115,0,0.747768497892312,0,0,0,0,0,0,0.199579371432817,0,0,0,0.280797178113459,0,0,0,0,0,0.201799707191048,0,0,0,0.894704431569664,0.166849141711909,0.390776190804081,0,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,2.86493381685228,0.296964680832639,2.76444631889309,0,0,0,0,0,0.398495976502139,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.945550727071745,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.307801034015188,0,0.23056390438806,4.30836693166906,4.23724750495832,2.55200927785536,1.19076871422421,7.46248686426089,0,0.784901281975124,0,0.676786981851542,0.588187602953219,0.671286347903371,0.189753732724185,0,0,0,0,0.649165919226273,0,0,0,0,0,0,0,3.21031058919516,0,0,0,0.242780379534093,0,1.20990716048664,0,0,0,0,0,0.330991955875499,0.313932918407225,0,0,0,0,0.195984794828755,0,0.17472666824203,0.171986032471617,0,0.219267951258557,0.246346371159628,0.193978032976839,0,1.12990370390266,0,0,0,0.391102765469606,0.561111741760736,0,1.19885765749278,0,0.114536596165916,1.02956998717179,0,0.372757606696298,0.471388069233591,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0.998395002494955,0.858452096273142,0,0.0671834724867263,0.360299883542404,0,0.0787831823072236,0.0824158583811665,0.337017719270924,0,0,0.795229689809303,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0.5085370753095,0,0,0.653174720218818,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.221858103073705,0,0.138348634936231,0,0,0,0,0,0,0,0,0.554805861502613,0.378806010550178,0,0,0.228840068396924,0,0,0,0,0,0,0.414706207840855,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.463044948647668,0,0,0.308801447160972,0,0,0,0,0,0.690860683462397,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41070377476274,0.6124909547064,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0.381382095467167,0,0,0.0752103283492573,0.20170506870352,0,1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| ||
|short_description=p@chr1:150532861..150532875,+ | |||
}} | }} |
Latest revision as of 21:10, 27 July 2015
Short description: | p@chr1:150532861..150532875, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:150532861..150532875, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.57e-15 | 3 |
acinar cell of salivary gland | 4.75e-15 | 3 |
extraembryonic cell | 1.44e-11 | 19 |
outer root sheath cell | 1.06e-10 | 2 |
acinar cell | 3.23e-09 | 5 |
protein secreting cell | 9.46e-08 | 6 |
fibrocyte | 3.49e-07 | 3 |
tendon cell | 3.49e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chorion | 2.61e-17 | 7 |
extraembryonic membrane | 2.89e-16 | 14 |
membranous layer | 2.89e-16 | 14 |
egg chorion | 3.57e-15 | 3 |
extraembryonic structure | 9.53e-15 | 24 |
hair root sheath | 1.06e-10 | 2 |
hair outer root sheath | 1.06e-10 | 2 |
bulb of hair follicle | 1.06e-10 | 2 |
saliva-secreting gland | 9.46e-08 | 6 |
gland of oral region | 9.46e-08 | 6 |
gland of foregut | 9.46e-08 | 6 |
oral gland | 9.46e-08 | 6 |
oral cavity | 9.46e-08 | 6 |
dense regular connective tissue | 3.49e-07 | 3 |
tendon | 3.49e-07 | 3 |
regular connective tissue | 3.49e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.21e-09 | 5 |
myotonic disease | 7.21e-09 | 5 |
muscle tissue disease | 7.21e-09 | 5 |
myopathy | 7.21e-09 | 5 |
muscular disease | 7.21e-09 | 5 |
myotonic dystrophy | 7.21e-09 | 5 |