FFCP PHASE1:Hg19::chr1:178838404..178838430,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:178838404..178838430,- to FFCP PHASE1:Hg19::chr1:178838404..178838430,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9068 | |EntrezGene=9068 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=489 | |HGNC=489 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000444255_5end | |||
|cluster_id=chr1:178838404..178838430,- | |||
|coexpression_cluster_id=C3907 | |||
|description=CAGE_peak_5_at_ANGPTL1_5end | |||
|id=chr1:178838404..178838430,- | |||
|ontology_enrichment_celltype=CL:0000136!1.50e-12!15;CL:0000055!9.69e-10!180;CL:0002334!2.03e-09!12;CL:0000680!2.41e-09!57;CL:0000056!2.41e-09!57;CL:0000355!2.41e-09!57;CL:0000187!2.61e-08!54;CL:0000057!2.03e-07!75;CL:0000183!7.76e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.97e-19;13!CL:0002615;3.32e-07;3!CL:0002579;5.74e-07;3!CL:0000737;8.24e-07;4!CL:0002334;8.69e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.94e-21,15;CL:0002615,3.35e-07,3;CL:0002579,5.62e-07,3;CL:0000737,8.17e-07,4;CL:0002334,8.75e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!7.38e-12!63;UBERON:0001015!7.38e-12!63;UBERON:0000383!7.38e-12!63;UBERON:0001134!1.07e-10!61;UBERON:0002036!1.07e-10!61;UBERON:0003082!1.07e-10!61;UBERON:0007023!1.41e-10!115;UBERON:0007100!3.66e-09!27;UBERON:0002100!5.02e-09!216;UBERON:0004290!2.22e-08!70;UBERON:0003688!8.00e-08!6;UBERON:0002358!8.00e-08!6;UBERON:0003684!8.00e-08!6;UBERON:0001178!8.00e-08!6;UBERON:0004457!1.32e-07!12;UBERON:0000042!1.32e-07!12;UBERON:0000948!2.45e-07!24;UBERON:0005498!2.45e-07!24;UBERON:0004140!2.45e-07!24;UBERON:0009881!2.45e-07!24;UBERON:0004141!2.45e-07!24;UBERON:0003084!2.45e-07!24;UBERON:0007005!2.45e-07!24;UBERON:0004139!2.45e-07!24;UBERON:0004291!2.45e-07!24;UBERON:0000914!2.80e-07!83;UBERON:0002329!2.80e-07!83;UBERON:0003077!2.80e-07!83;UBERON:0003059!2.80e-07!83;UBERON:0007282!2.80e-07!83;UBERON:0009618!2.80e-07!83;UBERON:0007285!2.80e-07!83;UBERON:0005256!2.80e-07!143;UBERON:0000486!8.22e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;7.27e-13;9!UBERON:0000042;7.27e-13;9!UBERON:0003688;1.61e-12;6!UBERON:0002358;1.61e-12;6!UBERON:0003684;1.61e-12;6!UBERON:0001178;1.61e-12;6!UBERON:0007100;1.02e-08;25!UBERON:0000948;4.34e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.59e-12,6;UBERON:0002358,1.59e-12,6;UBERON:0003684,1.59e-12,6;UBERON:0001178,1.59e-12,6;UBERON:0004457,2.02e-09,12;UBERON:0000042,2.02e-09,12;UBERON:0002100,2.28e-09,199;UBERON:0004797,8.48e-09,7;UBERON:0007023,1.49e-08,114;UBERON:0007100,1.03e-07,27;UBERON:0002385,1.38e-07,64;UBERON:0001015,1.38e-07,64;UBERON:0000383,1.38e-07,64;UBERON:0005256,2.35e-07,122;UBERON:0000926,5.27e-07,315;UBERON:0004120,5.27e-07,315;UBERON:0006603,5.27e-07,315 | |||
|phase1_expression=10.9007027562334,7.70761886007539,30.1642424765378,12.0087958023756,13.8557939272459,17.4467704820074,0,1.26343974685366,3.13422753839806,0,0,0,0,0.74259811776028,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,1.34140171940727,1.2786256184353,0.722878304769133,1.00267582127178,0.434539556882471,2.3858578411533,0.973269740605272,0.283604451492204,0.221729397462564,0.087834785693126,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47274756525787,2.78587125662075,2.78059279707759,6.02356903572509,0.354668382198357,0.560677600142307,0,0,2.48968828319813,0.808264032418128,0.326923806226917,0,0,0.234321431833797,0,0,0,0,0.161872944368132,0,0.204154171254893,0,0.309977343527296,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0.680593098960126,0,0.85422955527427,1.05965950579781,0,1.13357782162283,0.257640540045629,0.558350568994769,1.18143432568886,0.389748020644795,0,1.28869858099219,0.484938170456436,1.06502877754984,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,1.26755034821831,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.1466765716419,0.904902010304444,0,0,0,0,0,0,0,3.43147184779554,10.8524321078289,0,0.65147236858747,2.84313558994037,0.791951872933429,9.04318131178758,6.10073421020206,2.69927076191554,0,0,0,0.718874566474748,0,1.42636905040718,0.868687840005475,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,1.96306386750624,0.500170521059677,0.542530047399471,0,0.356857977594324,1.10391690523754,0.117141414992713,0.300946099727719,2.27407504055985,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,7.93944985020086,5.67809301165831,1.12264037773229,16.9143677017525,7.67560873600055,6.11244900345709,1.48418066444991,0.154209693802656,0.710246901252508,0.821271560138091,0.519254429183621,0.232420756919918,0,0,0,2.18147451512753,0.364182336013434,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.29731237272711,0,0,0,0,4.82051789532479,0.676695028044854,0.770243085573222,0.307007349452259,0.137836572484531,2.79292636657511,1.45016693914229,0.170453254832202,1.24644849905432,0,0,0,0,0,1.25924938732256,0,2.7723022215848,0,0,0.37064843820784,0.286249773483982,1.116475108079,0.632758849437452,1.71567174531442,0.255897791311334,1.28381696410176,0.636406495851874,0,0.719489830333259,1.37268514868027,0.589062011728432,0,0,0,0,9.99225307488266,0,0.545999645631943,1.69686518344455,0,0,3.3171948762061,4.82295973779139,0.578775534266688,1.31178950409327,0,0,0,0,0.982490410131212,0,1.06428319221179,1.89996871767898,1.97576935775941,0,0,0,0.670302275535787,0,3.01260162485693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07667176470977,0,0,0,0.23874448473769,0,0,0,0,0,0,0,2.19172787076177,0,0,0,0,0.933118762985422,0,0,0,7.20096861149615,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0.438770794307945,0,0,2.5393585306253,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.71521770914025,0.611030144933625,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,3.66926003308263,0,0,0,0,2.81268147816416,0,1.12990370390266,0,0,0.0633107959558787,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,2.23425921017803,1.3749625440701,4.30723814746088,0.599037001496973,2.14613024068285,6.69514372325618,0.940568614814168,1.80149941771202,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,3.38864541386552,0.104909176269996,0,0,0,0,3.31045985182716,0,2.17199840701485,3.45688596480507,1.30634944043764,0,0,0,0,0.293104467356165,0,0.129282956361551,0.13223260174269,0,0,2.77647272676006,0.943225830597996,1.65695622138878,1.9846640872478,0,0,0,1.08803560673895,4.0110383043632,2.75711019087115,4.26234419922746,0,0,0,0,0,0,0.124192805882767,0,0,0.151649117541648,0,0,0,0,0.597019211547496,0.233713309847224,1.10961172300523,0.947015026375446,0.754703705257725,0.889811221596536,7.32288218870155,1.36107831386915,0.621748802331122,1.03498604992744,0.318593534327405,1.79921244865442,0.776314784381297,0,0.53168342911599,0.521745061811734,0.901545653983311,1.90402606084398,1.62748293281865,0,1.28892668450986,0.464033759878494,1.19428766609585,0,2.40376993627955,1.01024846629776,0,0,0.428883182749851,0.260994291965212,0,0,0,0,0,0.877136198314828,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,4.58783002930469,0,0.781514011233092,0,0,0,0,0,0,0,0,0.548257766857182,3.47347824872506,0,0,0,0,0,0,5.9430588008968,0,0,0,0,0,0,3.68917536397416,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,8.41657488344263,10.9849203336184,0,1.45713297917742,0,0,0,0,0,0,1.46630900405095,0,0,4.4126697915703,0,0.588925401344836,0.297046400327086,0,0.339854229375634,0.939839179798536,0.128915775947154,0,0,0,0,1.46067277649303,0,0.143339583151451,0,0.0679914901909147,0,0,0.371995018166751,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,4.31938579843965,0,0,0,2.55880778281177,0.714193294391221,0,0.31037357147929,0,2.67318064768293,0.202117188958219,1.30630048738177,0.342233301085281,0.0673520530145875,1.29099969706817,0,0,0,0,0,7.03922827210363,5.74534787659472,1.22068853494722,5.99181096766961,0.805095174364105,0 | |phase1_expression=10.9007027562334,7.70761886007539,30.1642424765378,12.0087958023756,13.8557939272459,17.4467704820074,0,1.26343974685366,3.13422753839806,0,0,0,0,0.74259811776028,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,1.34140171940727,1.2786256184353,0.722878304769133,1.00267582127178,0.434539556882471,2.3858578411533,0.973269740605272,0.283604451492204,0.221729397462564,0.087834785693126,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47274756525787,2.78587125662075,2.78059279707759,6.02356903572509,0.354668382198357,0.560677600142307,0,0,2.48968828319813,0.808264032418128,0.326923806226917,0,0,0.234321431833797,0,0,0,0,0.161872944368132,0,0.204154171254893,0,0.309977343527296,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0.680593098960126,0,0.85422955527427,1.05965950579781,0,1.13357782162283,0.257640540045629,0.558350568994769,1.18143432568886,0.389748020644795,0,1.28869858099219,0.484938170456436,1.06502877754984,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,1.26755034821831,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.1466765716419,0.904902010304444,0,0,0,0,0,0,0,3.43147184779554,10.8524321078289,0,0.65147236858747,2.84313558994037,0.791951872933429,9.04318131178758,6.10073421020206,2.69927076191554,0,0,0,0.718874566474748,0,1.42636905040718,0.868687840005475,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,1.96306386750624,0.500170521059677,0.542530047399471,0,0.356857977594324,1.10391690523754,0.117141414992713,0.300946099727719,2.27407504055985,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,7.93944985020086,5.67809301165831,1.12264037773229,16.9143677017525,7.67560873600055,6.11244900345709,1.48418066444991,0.154209693802656,0.710246901252508,0.821271560138091,0.519254429183621,0.232420756919918,0,0,0,2.18147451512753,0.364182336013434,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.29731237272711,0,0,0,0,4.82051789532479,0.676695028044854,0.770243085573222,0.307007349452259,0.137836572484531,2.79292636657511,1.45016693914229,0.170453254832202,1.24644849905432,0,0,0,0,0,1.25924938732256,0,2.7723022215848,0,0,0.37064843820784,0.286249773483982,1.116475108079,0.632758849437452,1.71567174531442,0.255897791311334,1.28381696410176,0.636406495851874,0,0.719489830333259,1.37268514868027,0.589062011728432,0,0,0,0,9.99225307488266,0,0.545999645631943,1.69686518344455,0,0,3.3171948762061,4.82295973779139,0.578775534266688,1.31178950409327,0,0,0,0,0.982490410131212,0,1.06428319221179,1.89996871767898,1.97576935775941,0,0,0,0.670302275535787,0,3.01260162485693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07667176470977,0,0,0,0.23874448473769,0,0,0,0,0,0,0,2.19172787076177,0,0,0,0,0.933118762985422,0,0,0,7.20096861149615,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0.438770794307945,0,0,2.5393585306253,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.71521770914025,0.611030144933625,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,3.66926003308263,0,0,0,0,2.81268147816416,0,1.12990370390266,0,0,0.0633107959558787,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,2.23425921017803,1.3749625440701,4.30723814746088,0.599037001496973,2.14613024068285,6.69514372325618,0.940568614814168,1.80149941771202,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,3.38864541386552,0.104909176269996,0,0,0,0,3.31045985182716,0,2.17199840701485,3.45688596480507,1.30634944043764,0,0,0,0,0.293104467356165,0,0.129282956361551,0.13223260174269,0,0,2.77647272676006,0.943225830597996,1.65695622138878,1.9846640872478,0,0,0,1.08803560673895,4.0110383043632,2.75711019087115,4.26234419922746,0,0,0,0,0,0,0.124192805882767,0,0,0.151649117541648,0,0,0,0,0.597019211547496,0.233713309847224,1.10961172300523,0.947015026375446,0.754703705257725,0.889811221596536,7.32288218870155,1.36107831386915,0.621748802331122,1.03498604992744,0.318593534327405,1.79921244865442,0.776314784381297,0,0.53168342911599,0.521745061811734,0.901545653983311,1.90402606084398,1.62748293281865,0,1.28892668450986,0.464033759878494,1.19428766609585,0,2.40376993627955,1.01024846629776,0,0,0.428883182749851,0.260994291965212,0,0,0,0,0,0.877136198314828,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,4.58783002930469,0,0.781514011233092,0,0,0,0,0,0,0,0,0.548257766857182,3.47347824872506,0,0,0,0,0,0,5.9430588008968,0,0,0,0,0,0,3.68917536397416,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,8.41657488344263,10.9849203336184,0,1.45713297917742,0,0,0,0,0,0,1.46630900405095,0,0,4.4126697915703,0,0.588925401344836,0.297046400327086,0,0.339854229375634,0.939839179798536,0.128915775947154,0,0,0,0,1.46067277649303,0,0.143339583151451,0,0.0679914901909147,0,0,0.371995018166751,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,4.31938579843965,0,0,0,2.55880778281177,0.714193294391221,0,0.31037357147929,0,2.67318064768293,0.202117188958219,1.30630048738177,0.342233301085281,0.0673520530145875,1.29099969706817,0,0,0,0,0,7.03922827210363,5.74534787659472,1.22068853494722,5.99181096766961,0.805095174364105,0 | ||
|short_description=p5@ANGPTL1 | |||
}} | }} |
Latest revision as of 21:52, 18 September 2015
Short description: | p5@ANGPTL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ANGPTL1_5end |
Coexpression cluster: | C3907_Adipocyte_Smooth_Preadipocyte_Cardiac_Mesenchymal_umbilical_Sertoli |
Association with transcript: | 0bp_to_ENST00000444255_5end |
EntrezGene: | ANGPTL1 |
HGNC: | 489 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.94e-21 | 15 |
adipocyte of omentum tissue | 3.35e-07 | 3 |
omentum preadipocyte | 5.62e-07 | 3 |
striated muscle cell | 8.17e-07 | 4 |
preadipocyte | 8.75e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.59e-12 | 6 |
peritoneum | 1.59e-12 | 6 |
abdominal cavity | 1.59e-12 | 6 |
visceral peritoneum | 1.59e-12 | 6 |
cavity lining | 2.02e-09 | 12 |
serous membrane | 2.02e-09 | 12 |
trunk | 2.28e-09 | 199 |
blood vessel layer | 8.48e-09 | 7 |
adult organism | 1.49e-08 | 114 |
primary circulatory organ | 1.03e-07 | 27 |
muscle tissue | 1.38e-07 | 64 |
musculature | 1.38e-07 | 64 |
musculature of body | 1.38e-07 | 64 |
trunk mesenchyme | 2.35e-07 | 122 |
mesoderm | 5.27e-07 | 315 |
mesoderm-derived structure | 5.27e-07 | 315 |
presumptive mesoderm | 5.27e-07 | 315 |