FFCP PHASE1:Hg19::chr1:211500190..211500204,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:211500190..211500204,+ to FFCP PHASE1:Hg19::chr1:211500190..211500204,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7188 | |EntrezGene=7188 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12035 | |HGNC=12035 | ||
|TSSclassifier=strong | |||
|UniProt=O00463 | |UniProt=O00463 | ||
|association_with_transcript=11bp_to_ENST00000261464_5end | |||
|cluster_id=chr1:211500190..211500204,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_2_at_TRAF5_5end | |||
|id=chr1:211500190..211500204,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.54e-16!53;CL:0000051!1.54e-16!53;CL:0000838!2.73e-16!52;CL:0000945!1.19e-10!24;CL:0000826!1.19e-10!24;CL:0000236!3.91e-09!14;CL:0000791!3.68e-07!18;CL:0000789!3.68e-07!18;CL:0002420!3.68e-07!18;CL:0002419!3.68e-07!18;CL:0000790!3.68e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.00e-13;24!CL:0000542;1.23e-12;53!CL:0000236;2.87e-12;13!CL:0000791;5.77e-08;18!CL:0000789;5.77e-08;18!CL:0002419;5.77e-08;18!CL:0000084;4.35e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.72e-20,53;CL:0000051,1.72e-20,53;CL:0000838,4.20e-20,52;CL:0000945,8.84e-13,24;CL:0000826,8.84e-13,24;CL:0000236,3.10e-12,14;CL:0000791,3.39e-08,18;CL:0000789,3.39e-08,18;CL:0002420,3.39e-08,18;CL:0002419,3.39e-08,18;CL:0000790,3.39e-08,18;CL:0000738,1.25e-07,136;CL:0000084,2.74e-07,25;CL:0000827,2.74e-07,25;CL:0002031,2.79e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;1.23e-12;53!CL:0000790;5.77e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=2.36181893051724,1.92690471501885,1.40954404095971,0,0.446961094427288,2.61701557230111,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0,0,0.602694528023977,0,0.487932798790507,0.123121058076788,0.204000691244253,0,2.28988789704845,0.410623275218653,1.38096903554283,1.60468152070698,1.23150884174919,1.18066171970519,0,0.767658796194425,0.309632246632152,0,0,0,4.26069603191659,0.426507697462265,2.05520307534393,0,0.200544447470142,0.434021741431704,0.223915474239924,0.32389366601898,0.257575567634187,0.145398238779565,0,0.242584061187816,0,0.411167888021826,0.309706370895104,0,0.512321413058201,0,0,1.29096936716765,0,0.188242339542605,0.272906150057846,0,0.306083892370903,1.28371610830437,0.639337125799041,0,0,0,0,1.13477044938228,0,0.251248665256743,0,0.217188844705117,0,1.84138817993782,0,0.422510572623884,0.212604299965044,0.419317291016752,0.112328631146495,0,0.48217676009124,0,0,0.365328307529268,15.839662001519,8.19207916893197,7.11607403090844,11.0949857867292,6.00593980554019,8.62128659931725,6.61044872784862,9.54053754535364,7.96898156753228,5.28513470433845,3.82273228125229,3.96513985737078,0,0.263384084775077,1.37696839079683,1.17903228824749,1.43921049299656,4.84840836632966,0.651844533267181,1.4203434172042,1.94826728407911,4.67923918917729,2.94605907474837,3.76607620792156,4.06205795647523,3.0741916734162,2.73124629875744,2.95988228286617,1.65810010671509,3.47763702882063,1.63115219478266,2.1403266247177,2.09071047609954,4.87230173599535,2.68254345521345,1.71813722741315,2.78321661221453,4.45991580053735,3.25541726928209,3.8018081777935,1.50575119077773,0.76791966692651,1.24930726552346,1.65744076430812,3.28451198768419,1.81446068902259,1.33720097891754,0.724122019413995,0,0,1.2786256184353,0,0,0.434539556882471,0,0.486634870302636,1.03988298880475,0.443458794925128,0.527008714158756,0.982343066232845,0.364295288292542,0,3.8945687238562,2.08955684759121,2.26028532882071,0,0.571994910780128,0.371457501329565,0.39752481473341,0.860234595106124,0.347140501607594,0,0,0.550236083880135,0.208994966536811,1.55050055501597,0.71153252537342,1.67360306382335,0,0,2.92874469057803,0,0,0.625098097988558,0.22452937262617,0.450445921933289,0,0,0.183201743930407,0,0,0,1.49091585508596,0.506522046658319,3.83986624358335,1.14734648299525,0.354668382198357,0.560677600142307,1.06748995729705,0.98667019366864,0.933633106199299,0.404132016209064,0.326923806226917,0.302714855289863,0,0.234321431833797,0,0,0.149448680551801,0.117434498643765,0.809364721840658,0.280901613404497,0,0.245668634623536,0.413303124703062,1.18800285728205,1.97813543422845,0,0,0.336672227908132,0.125118519871964,0.554128230968366,2.63386572528503,1.5324389789951,1.65261864797256,0.113432183160021,0.717558542755448,2.56268866582281,1.69545520927649,1.50045548042201,0.824420233907511,0.515281080091258,1.67505170698431,0.843881661206331,0.292311015483596,1.7670364197088,1.47279837827679,1.61646056818812,1.42003837006646,0.806016785821122,1.18692414617341,0,0.545492241181669,0,0.365921118388786,0.927708378250397,0.929551542956147,0.932949495138334,0.756962552626885,0.72995471815166,0,0,0,0,0,2.36613600079688,1.18009283054671,1.44606617930089,1.65440959098591,2.17879444092406,0.71181185733329,1.61797569792197,1.17732879075208,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0.737930631258681,1.20097467208968,0.109750285408626,1.1240175325762,0.100528972411631,0.277765335475589,0,0,0,0.579652024875384,1.6437217193015,0.144366447761074,0,0.951270761172991,0,0.858486162094873,0.492434012174795,0.234004265139238,0.297262324577456,0,0.335964256397719,0.708875486211932,0.179117045405697,0.290633938513962,0,67.4948635917443,1.14462964217194,4.97587477297853,10.2325166926043,1.76739406796932,0.317489471460845,0.381988425558278,0,0,0.411309970813294,0.300343057843917,0.571652865261156,0.224262168690721,0.87192013766656,0.8800594298514,2.58543431515556,0,0,2.92531928243358,1.04007436911366,0,0,0,1.14382394926518,0,0,0.65147236858747,1.42156779497018,0,0.602878754119172,0,1.09970290300263,0,0.502257091432126,0,0.958499421966331,1.14861935834114,0,0.434343920002738,0.410952645100767,0.358121926479791,3.6988097517864,1.97030760201927,1.72502059887614,2.31017465303547,0.254094624222463,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0.414415513436035,0.12269149171914,0,0,4.15941723061614,1.78428988797162,1.41932173530541,2.10854546986884,0,0,0,0.664225598535437,0.553107505625109,0.521301686808497,0,0,1.44737618286021,0.215714200818617,1.38745825144478,0,0,0,0.992431231275107,5.37116906508219,0.561320188866147,0.256278298511402,3.07024349440022,0.965123526861645,1.48418066444991,0.154209693802656,0.532685175939381,0.164254312027618,0,0,0.362578348774867,0,0,0.918515585316854,0.182091168006717,1.31124414959424,0,0.616122696835318,0.784349769176855,0,0.844413031143006,0,0.340187410553031,0.431831832204279,0,0,1.00337954770971,0.254876273045038,0,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0,0.515205058238611,0.640986253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| ||
|short_description=p2@TRAF5 | |||
}} | }} |
Latest revision as of 22:48, 24 September 2015
Short description: | p2@TRAF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRAF5_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 11bp_to_ENST00000261464_5end |
EntrezGene: | TRAF5 |
HGNC: | 12035 |
UniProt: | O00463 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.72e-20 | 53 |
common lymphoid progenitor | 1.72e-20 | 53 |
lymphoid lineage restricted progenitor cell | 4.20e-20 | 52 |
lymphocyte of B lineage | 8.84e-13 | 24 |
pro-B cell | 8.84e-13 | 24 |
B cell | 3.10e-12 | 14 |
mature alpha-beta T cell | 3.39e-08 | 18 |
alpha-beta T cell | 3.39e-08 | 18 |
immature T cell | 3.39e-08 | 18 |
mature T cell | 3.39e-08 | 18 |
immature alpha-beta T cell | 3.39e-08 | 18 |
leukocyte | 1.25e-07 | 136 |
T cell | 2.74e-07 | 25 |
pro-T cell | 2.74e-07 | 25 |
hematopoietic lineage restricted progenitor cell | 2.79e-07 | 120 |