FFCP PHASE1:Hg19::chr1:243651108..243651152,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:243651108..243651152,+ to FFCP PHASE1:Hg19::chr1:243651108..243651152,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10806 | |EntrezGene=10806 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10671 | |HGNC=10671 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000497459_5end | |||
|cluster_id=chr1:243651108..243651152,+ | |||
|coexpression_cluster_id=C3957 | |||
|description=CAGE_peak_2_at_SDCCAG8_5end | |||
|id=chr1:243651108..243651152,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.59e-15!254;CL:1000449!6.20e-14!16;CL:1000497!9.51e-12!18;CL:0002518!9.51e-12!18;CL:0002681!1.83e-11!13;CL:0002584!1.83e-11!13;CL:1000507!2.29e-10!12;CL:1000494!2.29e-10!12;CL:0002076!2.03e-09!43;CL:0002368!4.64e-09!13;CL:0000039!6.65e-09!7;CL:0000586!6.65e-09!7;CL:0002159!1.01e-08!13;CL:0002321!1.69e-08!248;CL:0002077!3.44e-08!33;CL:0000223!4.90e-08!59;CL:0000220!8.47e-08!246;CL:1000612!2.20e-07!7;CL:1000746!2.20e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:1000449;4.78e-20;15!CL:1000497;2.99e-17;17!CL:0002518;2.99e-17;17!CL:0002368;7.71e-16;13!CL:0002681;1.31e-15;12!CL:0002584;1.31e-15;12!CL:0000039;9.87e-15;7!CL:0000586;9.87e-15;7!CL:0002076;2.33e-14;42!CL:1000507;1.52e-12;10!CL:1000494;1.52e-12;10!CL:0002077;2.19e-12;34!CL:0002159;3.12e-12;14!CL:1000746;7.10e-12;7!CL:1000612;7.10e-12;7!CL:0002322;2.10e-10;5!CL:0002202;9.34e-10;9!CL:0002632;9.34e-10;9!CL:0002188;2.90e-09;5!CL:0000240;9.78e-08;6!CL:0000311;9.78e-08;6!CL:0000079;9.78e-08;6!CL:0000237;9.78e-08;6!CL:0000362;2.03e-07;9!CL:0000244;3.08e-07;4!CL:0000731;3.08e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.86e-34,253;CL:1000449,3.66e-20,15;CL:0002076,7.27e-18,42;CL:1000497,2.37e-17,17;CL:0002518,2.37e-17,17;CL:0002368,7.98e-16,13;CL:0002681,9.13e-16,12;CL:0002584,9.13e-16,12;CL:0000039,9.91e-15,7;CL:0000586,9.91e-15,7;CL:0002077,1.35e-13,34;CL:1000507,1.36e-12,10;CL:1000494,1.36e-12,10;CL:0000223,1.97e-12,58;CL:0002159,3.17e-12,14;CL:0002321,3.96e-12,250;CL:1000746,5.18e-12,7;CL:1000612,5.18e-12,7;CL:0002322,2.11e-10,5;CL:0002202,9.30e-10,9;CL:0002632,9.30e-10,9;CL:0002188,2.45e-09,5;CL:0000240,8.90e-08,6;CL:0000311,8.90e-08,6;CL:0000079,8.90e-08,6;CL:0000237,8.90e-08,6;CL:0000036,8.90e-08,6;CL:0000357,8.90e-08,6;CL:0000114,8.90e-08,6;CL:0000362,2.05e-07,9;CL:0000076,2.86e-07,63;CL:0000244,3.60e-07,4;CL:0000731,3.60e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000357;9.78e-08;6!CL:0000114;9.78e-08;6!CL:0000223;1.55e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000080!7.83e-15!18;UBERON:0002120!7.83e-15!18;UBERON:0004875!7.83e-15!18;UBERON:0005721!7.83e-15!18;UBERON:0005754!7.83e-15!18;UBERON:0007297!7.83e-15!18;UBERON:0006555!2.06e-14!17;UBERON:0005103!2.06e-14!17;UBERON:0000083!2.06e-14!17;UBERON:0009201!2.06e-14!17;UBERON:0004819!2.06e-14!17;UBERON:0006553!2.06e-14!17;UBERON:0003074!2.06e-14!17;UBERON:0003060!2.06e-14!17;UBERON:0004876!3.46e-14!20;UBERON:0004211!6.20e-14!16;UBERON:0001285!6.20e-14!16;UBERON:0007684!6.20e-14!16;UBERON:0003220!6.20e-14!16;UBERON:0004208!6.20e-14!16;UBERON:0003887!6.54e-13!21;UBERON:0001225!1.83e-11!13;UBERON:0008987!1.83e-11!13;UBERON:0006554!4.88e-11!44;UBERON:0000058!5.77e-11!26;UBERON:0001008!1.39e-10!45;UBERON:0009773!2.29e-10!12;UBERON:0001231!2.29e-10!12;UBERON:0004810!2.29e-10!12;UBERON:0002113!1.05e-09!27;UBERON:0003918!1.05e-09!27;UBERON:0005095!1.05e-09!27;UBERON:0007687!1.05e-09!27;UBERON:0003064!3.17e-09!37;UBERON:0000464!3.71e-09!104;UBERON:0000353!4.46e-09!17;UBERON:0000489!7.34e-09!32;UBERON:0001851!1.65e-08!16;UBERON:0000466!3.26e-08!126;UBERON:0003886!3.65e-08!63;UBERON:0000074!2.20e-07!7;UBERON:0001229!2.20e-07!7;UBERON:0001230!2.20e-07!7;UBERON:0005749!2.20e-07!7;UBERON:0004199!2.20e-07!7;UBERON:0004209!2.20e-07!7;UBERON:0004198!2.20e-07!7;UBERON:0003135!2.29e-07!11;UBERON:0005177!4.74e-07!107;UBERON:0004119!5.83e-07!169;UBERON:0000925!5.83e-07!169;UBERON:0006595!5.83e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;4.78e-20;15!UBERON:0004819;4.78e-20;15!UBERON:0001285;4.78e-20;15!UBERON:0007684;4.78e-20;15!UBERON:0001225;1.31e-15;12!UBERON:0008987;1.31e-15;12!UBERON:0006554;2.05e-14;30!UBERON:0001008;2.05e-14;30!UBERON:0004211;1.52e-12;10!UBERON:0009773;1.52e-12;10!UBERON:0001231;1.52e-12;10!UBERON:0004810;1.52e-12;10!UBERON:0001851;5.67e-12;15!UBERON:0000353;5.67e-12;15!UBERON:0000074;7.10e-12;7!UBERON:0001229;7.10e-12;7!UBERON:0002113;3.55e-11;24!UBERON:0011143;3.55e-11;24!UBERON:0000489;1.15e-08;29!UBERON:0007196;2.00e-08;15!UBERON:0001558;2.00e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,3.66e-20,15;UBERON:0009773,3.66e-20,15;UBERON:0001231,3.66e-20,15;UBERON:0001285,3.66e-20,15;UBERON:0007684,3.66e-20,15;UBERON:0004208,3.66e-20,15;UBERON:0006555,1.14e-18,16;UBERON:0004819,1.14e-18,16;UBERON:0001225,9.13e-16,12;UBERON:0008987,9.13e-16,12;UBERON:0006554,9.17e-14,47;UBERON:0001008,2.39e-13,48;UBERON:0004810,1.36e-12,10;UBERON:0001851,4.30e-12,15;UBERON:0000353,4.30e-12,15;UBERON:0010532,5.18e-12,7;UBERON:0000074,5.18e-12,7;UBERON:0001229,5.18e-12,7;UBERON:0001230,5.18e-12,7;UBERON:0003220,5.18e-12,7;UBERON:0005749,5.18e-12,7;UBERON:0004199,5.18e-12,7;UBERON:0004209,5.18e-12,7;UBERON:0004198,5.18e-12,7;UBERON:0005103,2.32e-10,8;UBERON:0000083,2.32e-10,8;UBERON:0009201,2.32e-10,8;UBERON:0006553,2.32e-10,8;UBERON:0003074,2.32e-10,8;UBERON:0003060,2.32e-10,8;UBERON:0002113,4.10e-10,26;UBERON:0003918,4.10e-10,26;UBERON:0011143,4.10e-10,26;UBERON:0005095,4.10e-10,26;UBERON:0007687,4.10e-10,26;UBERON:0000080,4.45e-09,9;UBERON:0002120,4.45e-09,9;UBERON:0004875,4.45e-09,9;UBERON:0005721,4.45e-09,9;UBERON:0005754,4.45e-09,9;UBERON:0007297,4.45e-09,9;UBERON:0007196,1.92e-08,15;UBERON:0001558,1.92e-08,15;UBERON:0000489,6.03e-08,31;UBERON:0005177,6.40e-08,101;UBERON:0004876,3.24e-07,11;UBERON:0004119,3.33e-07,160;UBERON:0000925,3.33e-07,160;UBERON:0006595,3.33e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,5.89761447603621,66.988912125353,0,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.627713197974014,0,0,0,0.393364276848904,0,0.154816123316076,21.1466881630153,5.72291245678675,2.58827807116751,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0.512321413058201,0,0.344745680736619,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,1.13477044938228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,4.00724817121796,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0.976248230192678,0,0,0,0,0,0,0,0,0,0,16.1354799292738,0,0,0,0,0,0,0,0,0,0.269421344139376,0.490385709340376,0,0,0,0,0,0,0.939475989150119,0.647491777472526,0.842704840213491,0,0.122834317311768,0,0,0,0,0.718618141816238,0.336672227908132,0.250237039743928,0,0,0,0,0,0,0,0.211931901159562,1.20036438433761,1.64884046781502,0,0,0,0,0,0,0,0,0,0,8.69673839234836,1.09098448236334,4.30206893083506,11.2215809639228,6.36142887943129,12.3165579441689,11.0917328866446,15.3915719034133,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,1.47008711385542,0,0.982827216677626,0,0,0,0,2.19500570817251,3.37205259772859,9.24866546187004,1.574003567695,0,0,0,0,0.117408694235822,1.15493158208859,0.462985512576611,2.47330397904978,0,0,0,0,0,29.0574885359009,0.16798212819886,10.4913571959366,0,0,0,0,0,0,0.144119953416961,0,1.8414389344729,1.52795370223311,0,3.4214489204541,0.411309970813294,0,0,0,0,0.1466765716419,0,0,0,0,0,1.02882949704857,0,1.0656887160644,0,0,0,0,0,0,0.301439377059586,0,2.29937879718731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.00759705454927,8.19520801529477,0,0,0,2.70719767744447,1.07821471946181,7.84349769176855,7.30696123266303,1.26661954671451,2.27466768141793,1.53084334748864,2.80690690932781,7.71136263451447,1.89662506280697,2.00675909541941,0.509752546090077,1.66215201785745,5.82074362277664,0,0,0.256450125116389,0,0,0.412164046590889,0,0,10.3367796839311,9.75090369054782,0,0.48335359146061,0.154048617114644,0.460511024178389,0.827019434907183,0,0.725083469571143,0.0852266274161009,0.178064071293475,4.79326254546837,6.1500821556834,4.08360679982669,10.115778085555,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0.855877976067841,0,0,0.179872457583315,0,0.353437207037059,0,0,0,0.975267478179181,0,0,0,0,0,0,0.66343897524122,0.438450885253763,1.73632660280006,0.655894752046633,0,0,0.281695602532241,0,0,0,0,0,0,0,0.349934720244983,7.79399113076648,2.01090682660736,21.7781969722645,0.753150406214233,1.29151611801369,3.36942951335251,4.43430153536676,2.06751060186264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,5.23993513143015,0,0,0,0,0.71623345421307,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,27.5794698593172,0,0,0,0,0,0,0,0,0,0,0,0,26.2842851002389,16.8744371490372,6.30154757147647,0.31900115973192,0.732780747214898,0,0,0,0,0,0,0,0,0,0,6.8557779426842,0,1.51472047819464,0,0.884575645033392,0.611030144933625,0,0,0,0.067401132980677,0,0.468528891450678,0,0.782658475728359,0,0.789168805698781,0,0,0.063186579628488,0,0,0,0,0,0,33.014707339456,0,0,27.6338560708545,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0,0,0,0,1.56441106187842,0,0.426905989478705,0,0.72045208577053,0,0,0,0,10.6062315577558,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,4.66184130548556,2.06309154895851,5.40072439437941,0.2249738915515,1.5476039091159,0.0607495566580247,28.1765137583383,0.394028536495991,0.157363764404994,0,0,13.4340638123612,0,0,0,0,0,0,0,0,0,0,1.31897010310274,0,0.517131825446202,0.13223260174269,4.79043146076122,0,0.213574825135389,0,0,0,0,0,8.93677760878255,0,0,0,0,0,0,0,0,0,0,0.310482014706917,0,0,0,0,0,0,52.3164913285079,0,0,0,0,0,0,0,0,0,0,0,0,0.621051827505038,0,0,0.521745061811734,0.751288044986092,0,0,0,0.537052785212442,0,0,10.8007496459051,0,0,0,0,0,34.9732351233383,0,0,12.4815719298298,0,0,0,12.5449293621576,0,0,0,9.32661922674236,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,1.67855409263333,5.59869534029676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0,0,36.5109512823815,19.2290649056817,0,0,0,0,0,0.0752103283492573,0,0,12.8334280295897,0,12.1241990697977,0.0675375846183947,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0,1.50794029276486,0,0.685952037749674,0.0679697329768317,0,0,29.2538586976142,0.470958557103084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0.31020638566432,0,1.56597604516909,8.24461962368041,0,0,0,0,0,0,0,0,0,0,0,0.926089897295336,2.62271472604749,0,0,0,0.588925401344836,0,0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| ||
|short_description=p2@SDCCAG8 | |||
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Latest revision as of 19:53, 16 September 2015
Short description: | p2@SDCCAG8 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SDCCAG8_5end |
Coexpression cluster: | C3957_Alveolar_testicular_merkel_oral_carcinoid_mesothelioma_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000497459_5end |
EntrezGene: | SDCCAG8 |
HGNC: | 10671 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data