FFCP PHASE1:Hg19::chr1:27023752..27023799,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:27023752..27023799,+ to FFCP PHASE1:Hg19::chr1:27023752..27023799,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8289 | |EntrezGene=8289 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11110 | |HGNC=11110 | ||
|TSSclassifier=strong | |||
|UniProt=O14497 | |UniProt=O14497 | ||
|association_with_transcript=0bp_to_AF521670_5end | |||
|cluster_id=chr1:27023752..27023799,+ | |||
|description=CAGE_peak_4_at_ARID1A_5end | |||
|id=chr1:27023752..27023799,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.13e-21!182;CL:0000037!1.93e-21!172;CL:0000566!1.93e-21!172;CL:0002032!1.96e-19!165;CL:0000837!1.96e-19!165;CL:0000542!2.52e-19!53;CL:0000051!2.52e-19!53;CL:0000738!5.01e-19!140;CL:0000838!7.74e-19!52;CL:0000945!2.53e-14!24;CL:0000826!2.53e-14!24;CL:0002031!2.33e-12!124;CL:0002087!2.99e-11!119;CL:0000236!2.66e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.91e-24;24!CL:0000542;3.86e-17;53!CL:0000236;4.22e-12;13!CL:0000094;6.73e-10;8!CL:0000081;1.15e-08;11!CL:0000453;5.65e-07;5!CL:0000084;7.72e-07;25!CL:0000451;9.45e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.54e-31,53;CL:0000051,5.54e-31,53;CL:0000838,4.18e-30,52;CL:0000738,8.20e-29,136;CL:0000988,6.84e-28,177;CL:0000037,2.66e-27,168;CL:0000945,2.05e-24,24;CL:0000826,2.05e-24,24;CL:0002032,1.21e-23,161;CL:0000837,1.21e-23,161;CL:0002031,3.06e-16,120;CL:0002087,2.33e-15,115;CL:0000236,2.00e-13,14;CL:0000094,4.62e-10,8;CL:0000081,8.58e-09,11;CL:0000453,4.96e-07,5;CL:0000451,8.62e-07,10;CL:0000084,9.64e-07,25;CL:0000827,9.64e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000051;3.86e-17;53 | |||
|ontology_enrichment_disease=DOID:305!4.43e-09!106;DOID:162!7.08e-09!235;DOID:14566!5.16e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002390;2.16e-09;32!UBERON:0000178;1.02e-07;15!UBERON:0000179;1.02e-07;15!UBERON:0000463;1.02e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.49e-08,15;UBERON:0000179,8.49e-08,15;UBERON:0000463,8.49e-08,15 | |||
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| ||
|short_description=p4@ARID1A | |||
}} | }} |
Latest revision as of 06:21, 17 September 2015
Short description: | p4@ARID1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ARID1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AF521670_5end |
EntrezGene: | ARID1A |
HGNC: | 11110 |
UniProt: | O14497 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.54e-31 | 53 |
common lymphoid progenitor | 5.54e-31 | 53 |
lymphoid lineage restricted progenitor cell | 4.18e-30 | 52 |
leukocyte | 8.20e-29 | 136 |
hematopoietic cell | 6.84e-28 | 177 |
hematopoietic stem cell | 2.66e-27 | 168 |
lymphocyte of B lineage | 2.05e-24 | 24 |
pro-B cell | 2.05e-24 | 24 |
hematopoietic oligopotent progenitor cell | 1.21e-23 | 161 |
hematopoietic multipotent progenitor cell | 1.21e-23 | 161 |
hematopoietic lineage restricted progenitor cell | 3.06e-16 | 120 |
nongranular leukocyte | 2.33e-15 | 115 |
B cell | 2.00e-13 | 14 |
granulocyte | 4.62e-10 | 8 |
blood cell | 8.58e-09 | 11 |
Langerhans cell | 4.96e-07 | 5 |
dendritic cell | 8.62e-07 | 10 |
T cell | 9.64e-07 | 25 |
pro-T cell | 9.64e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
blood | 8.49e-08 | 15 |
haemolymphatic fluid | 8.49e-08 | 15 |
organism substance | 8.49e-08 | 15 |