FFCP PHASE1:Hg19::chr1:43232649..43232715,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:43232649..43232715,- to FFCP PHASE1:Hg19::chr1:43232649..43232715,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64175 | |EntrezGene=64175 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19316 | |HGNC=19316 | ||
|TSSclassifier=strong | |||
|UniProt=Q32P28,E2QRI1,B4DNM8 | |UniProt=Q32P28,E2QRI1,B4DNM8 | ||
|association_with_transcript=0bp_to_ENST00000236040,ENST00000296388,ENST00000372526,ENST00000460031,ENST00000492956,ENST00000495874,ENST00000540027,uc001chz.2_5end | |||
|cluster_id=chr1:43232649..43232715,- | |||
|coexpression_cluster_id=C750 | |||
|description=CAGE_peak_1_at_LEPRE1_5end | |||
|id=chr1:43232649..43232715,- | |||
|ontology_enrichment_celltype=CL:0000055!1.82e-41!180;CL:0000144!5.67e-28!625;CL:0002371!3.51e-27!591;CL:0000222!9.75e-25!119;CL:0000548!4.00e-23!679;CL:0000004!4.00e-23!679;CL:0000255!4.00e-23!679;CL:0000012!1.88e-22!682;CL:0000057!1.96e-22!75;CL:0000183!1.90e-18!59;CL:0000680!1.86e-17!57;CL:0000056!1.86e-17!57;CL:0000355!1.86e-17!57;CL:0000187!1.29e-16!54;CL:0000192!6.38e-15!42;CL:0000514!6.38e-15!42;CL:0000220!7.47e-15!246;CL:0002321!1.29e-14!248;CL:0000048!1.58e-14!430;CL:0000723!4.70e-14!436;CL:0000393!8.24e-14!60;CL:0000211!8.24e-14!60;CL:0000034!2.35e-13!444;CL:0000003!1.94e-12!722;CL:0000359!8.03e-12!32;CL:0002078!1.47e-08!44;CL:0000213!3.14e-08!57;CL:0000215!3.14e-08!57;CL:0000115!9.99e-08!35;CL:0002494!2.40e-07!16;CL:0002620!2.50e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.42e-11;32!CL:0000192;1.40e-10;43!CL:0000134;2.22e-10;55!CL:0000057;2.09e-09;73!CL:0000723;2.15e-09;61!CL:0000187;2.63e-09;55!CL:0000048;3.49e-09;58!CL:0002320;3.23e-08;188!CL:0000393;1.82e-07;61!CL:0000211;1.82e-07;61!CL:0002620;2.35e-07;23!CL:0002494;2.48e-07;16!CL:0000499;5.10e-07;28!CL:0000115;5.88e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.23e-25,121;CL:0000057,4.84e-23,76;CL:0000680,2.55e-17,58;CL:0000056,2.55e-17,58;CL:0000355,2.55e-17,58;CL:0000187,1.77e-16,55;CL:0002321,8.23e-15,250;CL:0000192,9.41e-15,43;CL:0000514,9.41e-15,43;CL:0000048,3.70e-14,427;CL:0000393,9.99e-14,61;CL:0000211,9.99e-14,61;CL:0000723,1.09e-13,433;CL:0000034,5.36e-13,441;CL:0000359,8.03e-12,32;CL:0002078,1.02e-08,45;CL:0000213,2.18e-08,58;CL:0000215,2.18e-08,58;CL:0000115,6.99e-08,36;CL:0002494,2.40e-07,16;CL:0002620,2.50e-07,23;CL:0000499,4.82e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000514;1.40e-10;43!CL:0000355;2.52e-09;58!CL:0000222;7.07e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.71e-22!79;UBERON:0007798!1.71e-22!79;UBERON:0004872!1.52e-19!84;UBERON:0000055!1.83e-18!69;UBERON:0003914!2.79e-18!118;UBERON:0004535!1.04e-17!110;UBERON:0000914!1.52e-17!83;UBERON:0002329!1.52e-17!83;UBERON:0003077!1.52e-17!83;UBERON:0003059!1.52e-17!83;UBERON:0007282!1.52e-17!83;UBERON:0009618!1.52e-17!83;UBERON:0007285!1.52e-17!83;UBERON:0001981!4.97e-17!60;UBERON:0007500!4.97e-17!60;UBERON:0004537!4.97e-17!60;UBERON:0006965!4.97e-17!60;UBERON:0004290!6.09e-17!70;UBERON:0001009!2.31e-16!113;UBERON:0000486!2.63e-16!82;UBERON:0005256!3.38e-16!143;UBERON:0000490!3.85e-16!138;UBERON:0001134!1.36e-15!61;UBERON:0002036!1.36e-15!61;UBERON:0003082!1.36e-15!61;UBERON:0001637!1.15e-14!42;UBERON:0003509!1.15e-14!42;UBERON:0004572!1.15e-14!42;UBERON:0002385!2.99e-14!63;UBERON:0001015!2.99e-14!63;UBERON:0000383!2.99e-14!63;UBERON:0002100!2.24e-11!216;UBERON:0004573!4.71e-11!33;UBERON:0004571!4.71e-11!33;UBERON:0003104!2.61e-08!238;UBERON:0009142!2.61e-08!238;UBERON:0002199!1.37e-07!45;UBERON:0002416!1.37e-07!45;UBERON:0000926!6.50e-07!448;UBERON:0004120!6.50e-07!448;UBERON:0006603!6.50e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.50e-11;42!UBERON:0003509;2.50e-11;42!UBERON:0004572;2.50e-11;42!UBERON:0007500;3.19e-10;56!UBERON:0001981;3.19e-10;56!UBERON:0004537;3.19e-10;56!UBERON:0004573;3.84e-10;33!UBERON:0004571;3.84e-10;33!UBERON:0000055;1.10e-09;65!UBERON:0002049;1.49e-09;75!UBERON:0007798;1.49e-09;75!UBERON:0003914;1.21e-08;74!UBERON:0002384;4.16e-08;198 | |||
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| ||
|short_description=p1@LEPRE1 | |||
}} | }} |
Latest revision as of 03:33, 18 September 2015
Short description: | p1@LEPRE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LEPRE1_5end |
Coexpression cluster: | C750_Smooth_Mesenchymal_Fibroblast_Hepatic_Chondrocyte_Lens_tenocyte |
Association with transcript: | 0bp_to_ENST00000236040, ENST00000296388, ENST00000372526, ENST00000460031, ENST00000492956, ENST00000495874, ENST00000540027, uc001chz.2_5end |
EntrezGene: | LEPRE1 |
HGNC: | 19316 |
UniProt: | Q32P28E2QRI1B4DNM8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.23e-25 | 121 |
fibroblast | 4.84e-23 | 76 |
muscle precursor cell | 2.55e-17 | 58 |
myoblast | 2.55e-17 | 58 |
multi-potent skeletal muscle stem cell | 2.55e-17 | 58 |
muscle cell | 1.77e-16 | 55 |
embryonic cell | 8.23e-15 | 250 |
smooth muscle cell | 9.41e-15 | 43 |
smooth muscle myoblast | 9.41e-15 | 43 |
multi fate stem cell | 3.70e-14 | 427 |
electrically responsive cell | 9.99e-14 | 61 |
electrically active cell | 9.99e-14 | 61 |
somatic stem cell | 1.09e-13 | 433 |
stem cell | 5.36e-13 | 441 |
vascular associated smooth muscle cell | 8.03e-12 | 32 |
meso-epithelial cell | 1.02e-08 | 45 |
lining cell | 2.18e-08 | 58 |
barrier cell | 2.18e-08 | 58 |
endothelial cell | 6.99e-08 | 36 |
cardiocyte | 2.40e-07 | 16 |
skin fibroblast | 2.50e-07 | 23 |
stromal cell | 4.82e-07 | 28 |