FFCP PHASE1:Hg19::chr1:66258576..66258619,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:66258576..66258619,+ to FFCP PHASE1:Hg19::chr1:66258576..66258619,+: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5142 | |EntrezGene=5142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8781 | |HGNC=8781 | ||
|TSSclassifier=strong | |||
|UniProt=Q07343,Q5TEK6 | |UniProt=Q07343,Q5TEK6 | ||
|association_with_transcript=-236bp_to_NM_002600,uc001dco.2_5end | |||
|cluster_id=chr1:66258576..66258619,+ | |||
|description=CAGE_peak_14_at_PDE4B_5end | |||
|id=chr1:66258576..66258619,+ | |||
|ontology_enrichment_celltype=CL:0002620!1.36e-09!23;CL:0000057!5.01e-09!75;CL:0000055!1.99e-08!180;CL:0002334!9.93e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.02e-13;23!CL:0002092;6.03e-07;10!CL:0002540;8.14e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.97e-13,23;CL:0002092,4.30e-07,10;CL:0002540,5.39e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;9.60e-07;3!DOID:127;9.60e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,9.63e-07,3;DOID:127,9.63e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.64e-10!57;UBERON:0005068!4.64e-10!57;UBERON:0006241!4.64e-10!57;UBERON:0007135!4.64e-10!57;UBERON:0007023!1.89e-09!115;UBERON:0000073!3.18e-08!94;UBERON:0001016!3.18e-08!94;UBERON:0002616!7.12e-08!59;UBERON:0003075!5.12e-07!86;UBERON:0007284!5.12e-07!86;UBERON:0001017!6.50e-07!82;UBERON:0000955!8.47e-07!69;UBERON:0006238!8.47e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;3.06e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.02e-08,41;UBERON:0002199,2.65e-07,46;UBERON:0002416,2.65e-07,46 | |||
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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895661896959697,0.32389366601898,1.54545340580512,0.290796477559129,0,0,0.232429036905685,0,0.309706370895104,0.28769239232215,0.256160706529101,1.18241114944293,0.689491361473237,0,0,0,0,0.224723484445085,0.306083892370903,0.641858054152187,1.27867425159808,1.31940520074686,0.398927315243264,0,0.290209238628584,0,0,0.251248665256743,0,0.217188844705117,0,0.368277635987565,0,0.211255286311942,0.212604299965044,0.628975936525128,0.112328631146495,0,0.48217676009124,0,0,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.378139268656271,0.665188192387692,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0,0,0.204154171254893,0.122834317311768,0.103325781175765,1.18800285728205,0,0.910161361938026,0,0,0,0.277064115484183,0,0,0.45071417671979,0,1.4351170855109,0.213557388818567,0.211931901159562,3.30100205692843,0.618315175430633,2.83404594050192,1.11670113798954,11.6455669246474,1.07180705677318,4.03894038790583,0.184099797284599,0.323292113637624,3.55009592516614,1.71278566986988,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775630294546667,0,0,0.531876233169741,0,0.771622122786426,1.41849132023278,0.799266537048298,0,0,0,0,0,0,0.301439377059586,1.74306691720059,0,0,0,0,0.479249710983165,0,0,0.144781306667579,0.821905290201534,2.32779252211864,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,1.00034104211935,0,0.207970861530807,1.24900292158013,0,0,0,0,1.03473071292505,4.64957918974806,2.58116835958384,0.347534457872331,0,0,0.206768026122887,0,0,0,0,0,0.496215615637554,0.920771839728375,0,1.02511319404561,0.511707249066704,0.482561763430822,1.48418066444991,0.154209693802656,0.177561725313127,0.574890092096664,0.519254429183621,0.464841513839837,0,0,0,0.114814448164607,0.546273504020151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.495056999523528,0,0,0,0.870036464629098,0.924291702687866,0.15350367472613,0,0.107420244868274,0,0.426133137080504,0,0,0,0,0,0.464845549297286,1.25924938732256,1.3940745403212,0.616067160352178,0.532306030317022,0,0,0,0,0,0,0,0.855877976067841,0,0,0,0,0.353437207037059,0,0,0,0,1.21856744815642,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0,0.430234056612155,0.196498082026242,0.35667105148125,4.25713276884717,0,0,0.379473173765715,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649243880549111,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0.703347082052564,0.333926115068718,0,0.63337622438398,0.398495976502139,0.552567831062295,0,0,0,0.622079175323615,0,0,0,0.197286811273867,0,0,0,0.463840490809256,0,0.260427761085233,0,0.724999575434793,0,0,0,0,0,0,0,0.60298219312704,0,0.774054819518572,2.06883333267483,1.09692698576986,0,0,0.307801034015188,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0.593042257361244,0.123563938946503,0.104421949505455,0.067401132980677,0,0.468528891450678,0,0,0,0,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.451961481561065,0,0,1.01297273529406,0,0,0,0,0,0,0.343189995723929,0,0.621262677827163,0,0,0,0,0.288950589901519,0.600420288709789,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0.446342914883745,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,1.09349201984444,0,0,0.0524545881349981,0,0,0,0,0,0,2.71499800876856,0.864221491201268,2.28611152076586,0,0.328370082997356,5.96358076248976,0,0.146552233678082,0,0.775697738169303,0.39669780522807,0,0,0.640724475406168,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.250381861413,0,0.443716206147409,0.124192805882767,0.138348634936231,0,0,0,0,0,0,0.298509605773748,0,0,4.73507513187723,1.76097531226803,0,0.228840068396924,0.756154618816195,0,0,0.318593534327405,0.899606224327209,0.155262956876259,0.414706207840855,0,0,0.150257608997218,0,1.22061219961398,0.909243296012797,0.214821114084977,1.39210127963548,0,0,0.686791410365586,0,0,0,0,0,0,0,0.489473409012935,0,0,0,0.176689145945881,0,0,0,0,0.303859956177382,0.829550616910385,0,0,0,0,0,0,0.39997479170986,1.60037594541211,0,0,0,0,0,4.09261988171685,1.83302179374359,0.157265941855896,0.327628914576042,0,0,0,0,0.318004350653419,0,4.80342448971282,0,0,0.834979926253974,0,0.319267718114302,1.02558182120378,0,1.03735878696327,0.645902582527404,1.42769420259154,0,0,0,0,3.81382095467167,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0.607838261565552,0,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| ||
|short_description=p14@PDE4B | |||
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Latest revision as of 23:39, 18 September 2015
Short description: | p14@PDE4B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_PDE4B_5end |
Coexpression cluster: | NA |
Association with transcript: | -236bp_to_NM_002600, uc001dco.2_5end |
EntrezGene: | PDE4B |
HGNC: | 8781 |
UniProt: | Q07343Q5TEK6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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skin fibroblast | 1.97e-13 | 23 |
bone marrow cell | 4.30e-07 | 10 |
mesenchymal stem cell of the bone marrow | 5.39e-07 | 6 |
Ontology term | p-value | n |
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skin of body | 2.02e-08 | 41 |
integument | 2.65e-07 | 46 |
integumental system | 2.65e-07 | 46 |
Ontology term | p-value | n |
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cell type benign neoplasm | 9.63e-07 | 3 |
leiomyoma | 9.63e-07 | 3 |